RNA–Protein interactions for RNA: ENST00000503360.1

HMGB1P35-201, Transcript of high mobility group box 1 pseudogene 35, humanhuman

BASIC

Gene HMGB1P35, Length 598 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P35-201ENST00000503360 CISD3P0C7P0 127 aa1.42□□□□□ -2.18
HMGB1P35-201ENST00000503360 ZNF806P0C7X5 589 aa1.42□□□□□ -2.18
HMGB1P35-201ENST00000503360 CDK2P24941 298 aa1.42□□□□□ -2.18
HMGB1P35-201ENST00000503360 NPY1RP25929 384 aa1.42□□□□□ -2.18
HMGB1P35-201ENST00000503360 SERPINB1P30740 379 aa1.42□□□□□ -2.18
HMGB1P35-201ENST00000503360 CXCL12P48061 93 aa1.42□□□□□ -2.18
HMGB1P35-201ENST00000503360 GNG3P63215 75 aa1.42□□□□□ -2.18
HMGB1P35-201ENST00000503360 HOXC5Q00444 222 aa1.42□□□□□ -2.18
HMGB1P35-201ENST00000503360 CAV1Q03135 178 aa1.42□□□□□ -2.18
HMGB1P35-201ENST00000503360 MMDQ15546 238 aa1.42□□□□□ -2.18
HMGB1P35-201ENST00000503360 ZCWPW2Q504Y3 356 aa1.42□□□□□ -2.18
HMGB1P35-201ENST00000503360 LUZP6Q538Z0 58 aa1.42□□□□□ -2.18
HMGB1P35-201ENST00000503360 ZNF678Q5SXM1 525 aa1.42□□□□□ -2.18
HMGB1P35-201ENST00000503360 AKR1C8PQ5T2L2 129 aa1.42□□□□□ -2.18
HMGB1P35-201ENST00000503360 Q5W150 140 aa1.42□□□□□ -2.18
HMGB1P35-201ENST00000503360 TBPL2Q6SJ96 375 aa1.42□□□□□ -2.18
HMGB1P35-201ENST00000503360 GRINAQ7Z429 371 aa1.42□□□□□ -2.18
HMGB1P35-201ENST00000503360 WDR86Q86TI4 376 aa1.42□□□□□ -2.18
HMGB1P35-201ENST00000503360 STX19Q8N4C7 294 aa1.42□□□□□ -2.18
HMGB1P35-201ENST00000503360 FER1L6-AS1Q8NA97 138 aa1.42□□□□□ -2.18
HMGB1P35-201ENST00000503360 TMEM35BQ8NCS4 154 aa1.42□□□□□ -2.18
HMGB1P35-201ENST00000503360 OR11H6Q8NGC7 330 aa1.42□□□□□ -2.18
HMGB1P35-201ENST00000503360 OR2T27Q8NH04 317 aa1.42□□□□□ -2.18
HMGB1P35-201ENST00000503360 LHFPL5Q8TAF8 219 aa1.42□□□□□ -2.18
HMGB1P35-201ENST00000503360 LINC01560Q8TB33 94 aa1.42□□□□□ -2.18
HMGB1P35-201ENST00000503360 CT55Q8WUE5 264 aa1.42□□□□□ -2.18
HMGB1P35-201ENST00000503360 SLC25A46Q96AG3 418 aa1.42□□□□□ -2.18
HMGB1P35-201ENST00000503360 CMBLQ96DG6 245 aa1.42□□□□□ -2.18
HMGB1P35-201ENST00000503360 CPNE2Q96FN4 548 aaPredicted RBP1.42□□□□□ -2.18
HMGB1P35-201ENST00000503360 CNBD2Q96M20 576 aa1.42□□□□□ -2.18
HMGB1P35-201ENST00000503360 SPIN2AQ99865 258 aa1.42□□□□□ -2.18
HMGB1P35-201ENST00000503360 SPIN2BQ9BPZ2 258 aa1.42□□□□□ -2.18
HMGB1P35-201ENST00000503360 MARVELD1Q9BSK0 173 aa1.42□□□□□ -2.18
HMGB1P35-201ENST00000503360 MS4A8Q9BY19 250 aa1.42□□□□□ -2.18
HMGB1P35-201ENST00000503360 COMMD5Q9GZQ3 224 aa1.42□□□□□ -2.18
HMGB1P35-201ENST00000503360 C6orf62Q9GZU0 229 aaPredicted RBP1.42□□□□□ -2.18
HMGB1P35-201ENST00000503360 C11orf49Q9H6J7 331 aa1.42□□□□□ -2.18
HMGB1P35-201ENST00000503360 PRTFDC1Q9NRG1 225 aa1.42□□□□□ -2.18
HMGB1P35-201ENST00000503360 INIPQ9NRY2 104 aa1.42□□□□□ -2.18
HMGB1P35-201ENST00000503360 SPANXA1Q9NS26 97 aa1.42□□□□□ -2.18
HMGB1P35-201ENST00000503360 CISHQ9NSE2 258 aa1.42□□□□□ -2.18
HMGB1P35-201ENST00000503360 ZNF492Q9P255 531 aa1.42□□□□□ -2.18
HMGB1P35-201ENST00000503360 DHCR7Q9UBM7 475 aaKnown RBP1.42□□□□□ -2.18
HMGB1P35-201ENST00000503360 RSL24D1Q9UHA3 163 aaKnown RBP1.42□□□□□ -2.18
HMGB1P35-201ENST00000503360 DNAJC12Q9UKB3 198 aa1.42□□□□□ -2.18
HMGB1P35-201ENST00000503360 PKIGQ9Y2B9 76 aa1.42□□□□□ -2.18
HMGB1P35-201ENST00000503360 UTP11Q9Y3A2 253 aaKnown RBP1.42□□□□□ -2.18
HMGB1P35-201ENST00000503360 TIMM22Q9Y584 194 aa1.42□□□□□ -2.18
HMGB1P35-201ENST00000503360 NUP214P35658 2090 aaPredicted RBP1.42□□□□□ -2.18
HMGB1P35-201ENST00000503360 NACADO15069 1562 aa1.42□□□□□ -2.18
HMGB1P35-201ENST00000503360 PBRM1Q86U86 1689 aa1.42□□□□□ -2.18
HMGB1P35-201ENST00000503360 IGHV3-21A0A0B4J1V1 117 aa1.41□□□□□ -2.18
HMGB1P35-201ENST00000503360 IGHV3-43A0A0B4J1X8 118 aa1.41□□□□□ -2.18
HMGB1P35-201ENST00000503360 TRAV26-2A0A0B4J265 109 aa1.41□□□□□ -2.18
HMGB1P35-201ENST00000503360 EXOC1LA0A1B0GW35 172 aa1.41□□□□□ -2.18
HMGB1P35-201ENST00000503360 IZUMO1RA6ND01 250 aa1.41□□□□□ -2.18
HMGB1P35-201ENST00000503360 LEUTXA8MZ59 168 aa1.41□□□□□ -2.18
HMGB1P35-201ENST00000503360 C4orf51C9J302 202 aa1.41□□□□□ -2.18
HMGB1P35-201ENST00000503360 INMT-MINDY4F8WBC2 141 aa1.41□□□□□ -2.18
HMGB1P35-201ENST00000503360 K7ERS5 55 aa1.41□□□□□ -2.18
HMGB1P35-201ENST00000503360 M0R381 172 aa1.41□□□□□ -2.18
HMGB1P35-201ENST00000503360 ZNF207O43670 478 aaKnown RBP1.41□□□□□ -2.18
HMGB1P35-201ENST00000503360 GSTZ1O43708 216 aaPredicted RBP1.41□□□□□ -2.18
HMGB1P35-201ENST00000503360 OR7C2O60412 319 aa1.41□□□□□ -2.18
HMGB1P35-201ENST00000503360 PFDN1O60925 122 aa1.41□□□□□ -2.18
HMGB1P35-201ENST00000503360 S1PR2O95136 353 aa1.41□□□□□ -2.18
HMGB1P35-201ENST00000503360 APOMO95445 188 aa1.41□□□□□ -2.18
HMGB1P35-201ENST00000503360 GPR75O95800 540 aa1.41□□□□□ -2.18
HMGB1P35-201ENST00000503360 CCNE2O96020 404 aa1.41□□□□□ -2.18
HMGB1P35-201ENST00000503360 IGHV1-46P01743 117 aa1.41□□□□□ -2.18
HMGB1P35-201ENST00000503360 IGHMP01871 453 aa1.41□□□□□ -2.18
HMGB1P35-201ENST00000503360 HLA-DQB1P01920 261 aa1.41□□□□□ -2.18
HMGB1P35-201ENST00000503360 SERPINE1P05121 402 aa1.41□□□□□ -2.18
HMGB1P35-201ENST00000503360 HLA-DQB2P05538 268 aa1.41□□□□□ -2.18
HMGB1P35-201ENST00000503360 CRHP06850 196 aa1.41□□□□□ -2.18
HMGB1P35-201ENST00000503360 PFN1P07737 140 aaKnown RBP1.41□□□□□ -2.18
HMGB1P35-201ENST00000503360 GUSBP08236 651 aa1.41□□□□□ -2.18
HMGB1P35-201ENST00000503360 LINC00869P0C866 280 aa1.41□□□□□ -2.18
HMGB1P35-201ENST00000503360 PTHLHP12272 177 aa1.41□□□□□ -2.18
HMGB1P35-201ENST00000503360 CYBAP13498 195 aa1.41□□□□□ -2.18
HMGB1P35-201ENST00000503360 MUC1P15941 1255 aaPredicted RBP1.41□□□□□ -2.18
HMGB1P35-201ENST00000503360 CCL1P22362 96 aa1.41□□□□□ -2.18
HMGB1P35-201ENST00000503360 S100A2P29034 98 aa1.41□□□□□ -2.18
HMGB1P35-201ENST00000503360 OPRK1P41145 380 aa1.41□□□□□ -2.18
HMGB1P35-201ENST00000503360 AKR1C2P52895 323 aa1.41□□□□□ -2.18
HMGB1P35-201ENST00000503360 CMC4P56277 68 aaPredicted RBP1.41□□□□□ -2.18
HMGB1P35-201ENST00000503360 LINC00313P59037 77 aa1.41□□□□□ -2.18
HMGB1P35-201ENST00000503360 SNRPD2P62316 118 aaKnown RBP1.41□□□□□ -2.18
HMGB1P35-201ENST00000503360 MOBPQ13875 183 aa1.41□□□□□ -2.18
HMGB1P35-201ENST00000503360 KLHL12Q53G59 568 aa1.41□□□□□ -2.18
HMGB1P35-201ENST00000503360 C9orf64Q5T6V5 341 aa1.41□□□□□ -2.18
HMGB1P35-201ENST00000503360 HES3Q5TGS1 186 aa1.41□□□□□ -2.18
HMGB1P35-201ENST00000503360 ZFP1Q6P2D0 407 aa1.41□□□□□ -2.18
HMGB1P35-201ENST00000503360 TMPPEQ6ZT21 453 aa1.41□□□□□ -2.18
HMGB1P35-201ENST00000503360 GOLT1AQ6ZVE7 132 aa1.41□□□□□ -2.18
HMGB1P35-201ENST00000503360 DAZ4Q86SG3 579 aaKnown RBP1.41□□□□□ -2.18
HMGB1P35-201ENST00000503360 LRP11Q86VZ4 500 aa1.41□□□□□ -2.18
HMGB1P35-201ENST00000503360 SLC35F6Q8N357 371 aa1.41□□□□□ -2.18
HMGB1P35-201ENST00000503360 SMIM20Q8N5G0 67 aa1.41□□□□□ -2.18
HMGB1P35-201ENST00000503360 ANKRD29Q8N6D5 301 aa1.41□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms