RNA–Protein interactions for RNA: ENST00000452448.6

EPHA3-202, Transcript of EPH receptor A3, humanhuman

TSL 1 (best) BASIC

Gene EPHA3, Length 2,546 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA3-202ENST00000452448 FAM53BQ14153 422 aa4.18□□□□□ -1.74
EPHA3-202ENST00000452448 MPV17LQ2QL34 196 aa4.18□□□□□ -1.74
EPHA3-202ENST00000452448 UBE2NLQ5JXB2 153 aa4.18□□□□□ -1.74
EPHA3-202ENST00000452448 Q6AWC8 147 aa4.18□□□□□ -1.74
EPHA3-202ENST00000452448 ZNF880Q6PDB4 577 aa4.18□□□□□ -1.74
EPHA3-202ENST00000452448 Q6ZWC4 215 aa4.18□□□□□ -1.74
EPHA3-202ENST00000452448 TMEM229BQ8NBD8 167 aa4.18□□□□□ -1.74
EPHA3-202ENST00000452448 OR5AU1Q8NGC0 362 aa4.18□□□□□ -1.74
EPHA3-202ENST00000452448 SLC37A2Q8TED4 501 aa4.18□□□□□ -1.74
EPHA3-202ENST00000452448 TMEM170AQ8WVE7 144 aa4.18□□□□□ -1.74
EPHA3-202ENST00000452448 TAS2R5Q9NYW4 299 aa4.18□□□□□ -1.74
EPHA3-202ENST00000452448 TMED7Q9Y3B3 224 aa4.18□□□□□ -1.74
EPHA3-202ENST00000452448 LINC00312Q9Y6C7 94 aa4.18□□□□□ -1.74
EPHA3-202ENST00000452448 SELENOKQ9Y6D0 94 aa4.18□□□□□ -1.74
EPHA3-202ENST00000452448 LOC285556D6RIA3 1793 aa4.17□□□□□ -1.74
EPHA3-202ENST00000452448 SMCHD1A6NHR9 2005 aa4.17□□□□□ -1.74
EPHA3-202ENST00000452448 NUP210LQ5VU65 1888 aa4.17□□□□□ -1.74
EPHA3-202ENST00000452448 TRBV24-1A0A075B6N3 115 aa4.17□□□□□ -1.74
EPHA3-202ENST00000452448 MUC21A0A0G2JKD1 596 aa4.17□□□□□ -1.74
EPHA3-202ENST00000452448 MUC21A0A140T8X8 626 aa4.17□□□□□ -1.74
EPHA3-202ENST00000452448 F8VVB4 439 aa4.17□□□□□ -1.74
EPHA3-202ENST00000452448 F8VWA3 439 aa4.17□□□□□ -1.74
EPHA3-202ENST00000452448 SIRPB1O00241 398 aa4.17□□□□□ -1.74
EPHA3-202ENST00000452448 EFNA2O43921 213 aa4.17□□□□□ -1.74
EPHA3-202ENST00000452448 TBL1XO60907 577 aa4.17□□□□□ -1.74
EPHA3-202ENST00000452448 GRAP2O75791 330 aa4.17□□□□□ -1.74
EPHA3-202ENST00000452448 MDKP21741 143 aaPredicted RBP4.17□□□□□ -1.74
EPHA3-202ENST00000452448 FCARP24071 287 aa4.17□□□□□ -1.74
EPHA3-202ENST00000452448 CDK2P24941 298 aa4.17□□□□□ -1.74
EPHA3-202ENST00000452448 LPAR6P43657 344 aa4.17□□□□□ -1.74
EPHA3-202ENST00000452448 NKX2-1P43699 371 aaPredicted RBP4.17□□□□□ -1.74
EPHA3-202ENST00000452448 VDAC2P45880 294 aaPredicted RBP4.17□□□□□ -1.74
EPHA3-202ENST00000452448 LHX2P50458 406 aa4.17□□□□□ -1.74
EPHA3-202ENST00000452448 CSRP3P50461 194 aa4.17□□□□□ -1.74
EPHA3-202ENST00000452448 OR1D5P58170 312 aa4.17□□□□□ -1.74
EPHA3-202ENST00000452448 TAS2R19P59542 299 aa4.17□□□□□ -1.74
EPHA3-202ENST00000452448 YPEL3P61236 119 aaPredicted RBP4.17□□□□□ -1.74
EPHA3-202ENST00000452448 TIAL1Q01085 375 aaKnown RBP eCLIP4.17□□□□□ -1.74
EPHA3-202ENST00000452448 FAM174BQ3ZCQ3 159 aa4.17□□□□□ -1.74
EPHA3-202ENST00000452448 MPV17L2Q567V2 206 aa4.17□□□□□ -1.74
EPHA3-202ENST00000452448 MUC21Q5SSG8 566 aa4.17□□□□□ -1.74
EPHA3-202ENST00000452448 LCNL1Q6ZST4 164 aa4.17□□□□□ -1.74
EPHA3-202ENST00000452448 FAM231DQ6ZW35 169 aa4.17□□□□□ -1.74
EPHA3-202ENST00000452448 CMTM4Q8IZR5 234 aa4.17□□□□□ -1.74
EPHA3-202ENST00000452448 EXOC3-AS1Q8N2X6 119 aa4.17□□□□□ -1.74
EPHA3-202ENST00000452448 GATD1Q8NB37 220 aa4.17□□□□□ -1.74
EPHA3-202ENST00000452448 PPTC7Q8NI37 304 aa4.17□□□□□ -1.74
EPHA3-202ENST00000452448 OR51E1Q8TCB6 317 aa4.17□□□□□ -1.74
EPHA3-202ENST00000452448 RND1Q92730 232 aa4.17□□□□□ -1.74
EPHA3-202ENST00000452448 DDIT4LQ96D03 193 aa4.17□□□□□ -1.74
EPHA3-202ENST00000452448 SAMD10Q9BYL1 202 aa4.17□□□□□ -1.74
EPHA3-202ENST00000452448 SLC35B3Q9H1N7 401 aa4.17□□□□□ -1.74
EPHA3-202ENST00000452448 ZFC3H1O60293 1989 aaKnown RBP4.17□□□□□ -1.74
EPHA3-202ENST00000452448 TRBV20-1A0A075B6N2 111 aa4.17□□□□□ -1.74
EPHA3-202ENST00000452448 NSG1A0A0A6YYJ2 146 aa4.17□□□□□ -1.74
EPHA3-202ENST00000452448 A6NDN8 102 aa4.17□□□□□ -1.74
EPHA3-202ENST00000452448 RER1O15258 196 aa4.17□□□□□ -1.74
EPHA3-202ENST00000452448 HCRTO43612 131 aa4.17□□□□□ -1.74
EPHA3-202ENST00000452448 ZIC3O60481 467 aa4.17□□□□□ -1.74
EPHA3-202ENST00000452448 SSR4P51571 173 aa4.17□□□□□ -1.74
EPHA3-202ENST00000452448 PGGT1BP53609 377 aa4.17□□□□□ -1.74
EPHA3-202ENST00000452448 OR7A5Q15622 319 aa4.17□□□□□ -1.74
EPHA3-202ENST00000452448 DHRS13Q6UX07 377 aa4.17□□□□□ -1.74
EPHA3-202ENST00000452448 HIST2H2ABQ8IUE6 130 aaPredicted RBP4.17□□□□□ -1.74
EPHA3-202ENST00000452448 TEX45Q8NA69 505 aa4.17□□□□□ -1.74
EPHA3-202ENST00000452448 OR2M3Q8NG83 312 aa4.17□□□□□ -1.74
EPHA3-202ENST00000452448 MBD6Q96DN6 1003 aa4.17□□□□□ -1.74
EPHA3-202ENST00000452448 MS4A6EQ96DS6 147 aa4.17□□□□□ -1.74
EPHA3-202ENST00000452448 GMPPAQ96IJ6 420 aaPredicted RBP4.17□□□□□ -1.74
EPHA3-202ENST00000452448 EIF5A2Q9GZV4 153 aaKnown RBP4.17□□□□□ -1.74
EPHA3-202ENST00000452448 FBXL15Q9H469 300 aa4.17□□□□□ -1.74
EPHA3-202ENST00000452448 BANF2Q9H503 90 aa4.17□□□□□ -1.74
EPHA3-202ENST00000452448 PARP11Q9NR21 331 aa4.17□□□□□ -1.74
EPHA3-202ENST00000452448 NDUFB11Q9NX14 153 aa4.17□□□□□ -1.74
EPHA3-202ENST00000452448 LSM7Q9UK45 103 aaKnown RBP4.17□□□□□ -1.74
EPHA3-202ENST00000452448 DOCK1Q14185 1865 aa4.16□□□□□ -1.74
EPHA3-202ENST00000452448 DOCK5Q9H7D0 1870 aa4.16□□□□□ -1.74
EPHA3-202ENST00000452448 LOC285095A0A1B0GVY8 99 aa4.16□□□□□ -1.74
EPHA3-202ENST00000452448 LRRC30A6NM36 301 aa4.16□□□□□ -1.74
EPHA3-202ENST00000452448 K7EQS6 105 aa4.16□□□□□ -1.74
EPHA3-202ENST00000452448 SPRY2O43597 315 aa4.16□□□□□ -1.74
EPHA3-202ENST00000452448 PLPP2O43688 288 aa4.16□□□□□ -1.74
EPHA3-202ENST00000452448 CGAP01215 116 aa4.16□□□□□ -1.74
EPHA3-202ENST00000452448 SLC25A4P12235 298 aa4.16□□□□□ -1.74
EPHA3-202ENST00000452448 ELK1P19419 428 aa4.16□□□□□ -1.74
EPHA3-202ENST00000452448 PRDX3P30048 256 aaKnown RBP4.16□□□□□ -1.74
EPHA3-202ENST00000452448 LEPP41159 167 aa4.16□□□□□ -1.74
EPHA3-202ENST00000452448 RND2P52198 227 aa4.16□□□□□ -1.74
EPHA3-202ENST00000452448 EFNB2P52799 333 aa4.16□□□□□ -1.74
EPHA3-202ENST00000452448 TCF15Q12870 199 aa4.16□□□□□ -1.74
EPHA3-202ENST00000452448 TTC32Q5I0X7 151 aa4.16□□□□□ -1.74
EPHA3-202ENST00000452448 ENTPD8Q5MY95 495 aa4.16□□□□□ -1.74
EPHA3-202ENST00000452448 HLA-DQA1Q5Y7H0 255 aa4.16□□□□□ -1.74
EPHA3-202ENST00000452448 TREML4Q6UXN2 200 aa4.16□□□□□ -1.74
EPHA3-202ENST00000452448 NPWQ8N729 165 aa4.16□□□□□ -1.74
EPHA3-202ENST00000452448 OR52P1PQ8NH57 321 aa4.16□□□□□ -1.74
EPHA3-202ENST00000452448 LIN37Q96GY3 246 aaPredicted RBP4.16□□□□□ -1.74
EPHA3-202ENST00000452448 LINC01587Q99440 93 aa4.16□□□□□ -1.74
EPHA3-202ENST00000452448 TMEM222Q9H0R3 208 aa4.16□□□□□ -1.74
EPHA3-202ENST00000452448 NRN1Q9NPD7 142 aa4.16□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 115.6 ms