RNA–Protein interactions for RNA: ENST00000395454.6

SCAF11-204, Transcript of SR-related CTD associated factor 11, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCAF11, Length 1,931 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-204ENST00000395454 SDHAF2Q9NX18 166 aa12.44□□□□□ -0.42
SCAF11-204ENST00000395454 SVEP1Q4LDE5 3571 aa12.44□□□□□ -0.42
SCAF11-204ENST00000395454 CELSR1Q9NYQ6 3014 aa12.44□□□□□ -0.42
SCAF11-204ENST00000395454 PRRC2AP48634 2157 aaKnown RBP12.43□□□□□ -0.42
SCAF11-204ENST00000395454 TRAV38-1A0A0B4J264 116 aa12.43□□□□□ -0.42
SCAF11-204ENST00000395454 KBTBD11-OT1A0A1B0GTJ5 212 aa12.43□□□□□ -0.42
SCAF11-204ENST00000395454 A0A1B0GW55 424 aa12.43□□□□□ -0.42
SCAF11-204ENST00000395454 DUX4L2P0CJ85 424 aa12.43□□□□□ -0.42
SCAF11-204ENST00000395454 DUX4L3P0CJ86 424 aa12.43□□□□□ -0.42
SCAF11-204ENST00000395454 DUX4L4P0CJ87 422 aa12.43□□□□□ -0.42
SCAF11-204ENST00000395454 DUX4L5P0CJ88 424 aa12.43□□□□□ -0.42
SCAF11-204ENST00000395454 DUX4L6P0CJ89 424 aa12.43□□□□□ -0.42
SCAF11-204ENST00000395454 DUX4L7P0CJ90 424 aa12.43□□□□□ -0.42
SCAF11-204ENST00000395454 BRWD1-AS2P59051 145 aa12.43□□□□□ -0.42
SCAF11-204ENST00000395454 RPL30P62888 115 aaKnown RBP12.43□□□□□ -0.42
SCAF11-204ENST00000395454 FAM74A1Q5RGS3 127 aa12.43□□□□□ -0.42
SCAF11-204ENST00000395454 DUX4L9Q6RFH8 374 aaPredicted RBP12.43□□□□□ -0.42
SCAF11-204ENST00000395454 OR2C3Q8N628 320 aa12.43□□□□□ -0.42
SCAF11-204ENST00000395454 RFESDQ8TAC1 157 aa12.43□□□□□ -0.42
SCAF11-204ENST00000395454 PIMREGQ9BSJ6 248 aa12.43□□□□□ -0.42
SCAF11-204ENST00000395454 NARFLQ9H6Q4 476 aa12.43□□□□□ -0.42
SCAF11-204ENST00000395454 DUX4Q9UBX2 424 aa12.43□□□□□ -0.42
SCAF11-204ENST00000395454 CLN8Q9UBY8 286 aa12.43□□□□□ -0.42
SCAF11-204ENST00000395454 FSTL3O95633 263 aa12.43□□□□□ -0.42
SCAF11-204ENST00000395454 PVALBP20472 110 aaPredicted RBP12.43□□□□□ -0.42
SCAF11-204ENST00000395454 EDDM3BP56851 147 aa12.43□□□□□ -0.42
SCAF11-204ENST00000395454 POLR2GP62487 172 aaKnown RBP eCLIP12.43□□□□□ -0.42
SCAF11-204ENST00000395454 AANATQ16613 207 aa12.43□□□□□ -0.42
SCAF11-204ENST00000395454 RPL7L1Q6DKI1 246 aaKnown RBP12.43□□□□□ -0.42
SCAF11-204ENST00000395454 Q6ZRM9 215 aa12.43□□□□□ -0.42
SCAF11-204ENST00000395454 HSD17B13Q7Z5P4 300 aaPredicted RBP12.43□□□□□ -0.42
SCAF11-204ENST00000395454 FAM216BQ8N7L0 139 aa12.43□□□□□ -0.42
SCAF11-204ENST00000395454 CCL13Q99616 98 aa12.43□□□□□ -0.42
SCAF11-204ENST00000395454 IFI27L2Q9H2X8 130 aa12.43□□□□□ -0.42
SCAF11-204ENST00000395454 TRGV10A0A0A0MS01 117 aa12.42□□□□□ -0.42
SCAF11-204ENST00000395454 NKX6-3A6NJ46 265 aa12.42□□□□□ -0.42
SCAF11-204ENST00000395454 ZNF729A6NN14 1252 aaPredicted RBP12.42□□□□□ -0.42
SCAF11-204ENST00000395454 FAM90A26D6RGX4 464 aa12.42□□□□□ -0.42
SCAF11-204ENST00000395454 NDUFS8O00217 210 aa12.42□□□□□ -0.42
SCAF11-204ENST00000395454 GYPAP02724 150 aa12.42□□□□□ -0.42
SCAF11-204ENST00000395454 FAM157CP0CG43 387 aa12.42□□□□□ -0.42
SCAF11-204ENST00000395454 DSCR9P59020 149 aa12.42□□□□□ -0.42
SCAF11-204ENST00000395454 EIF5AL1Q6IS14 154 aaKnown RBP12.42□□□□□ -0.42
SCAF11-204ENST00000395454 C10orf105Q8TEF2 133 aa12.42□□□□□ -0.42
SCAF11-204ENST00000395454 GFOD1Q9NXC2 390 aa12.42□□□□□ -0.42
SCAF11-204ENST00000395454 GNG12Q9UBI6 72 aa12.42□□□□□ -0.42
SCAF11-204ENST00000395454 RNF150Q9ULK6 438 aa12.42□□□□□ -0.42
SCAF11-204ENST00000395454 PSG11Q9UQ72 335 aa12.42□□□□□ -0.42
SCAF11-204ENST00000395454 MMP24Q9Y5R2 645 aa12.42□□□□□ -0.42
SCAF11-204ENST00000395454 IGHV4-30-2A0A087WSY4 118 aa12.41□□□□□ -0.42
SCAF11-204ENST00000395454 IGHV3-43A0A0B4J1X8 118 aa12.41□□□□□ -0.42
SCAF11-204ENST00000395454 PROP1O75360 226 aa12.41□□□□□ -0.42
SCAF11-204ENST00000395454 TMEM50AO95807 157 aa12.41□□□□□ -0.42
SCAF11-204ENST00000395454 IGHV2-70P01814 119 aa12.41□□□□□ -0.42
SCAF11-204ENST00000395454 FGF2P09038 288 aa12.41□□□□□ -0.42
SCAF11-204ENST00000395454 IGHV3-43DP0DP04 118 aa12.41□□□□□ -0.42
SCAF11-204ENST00000395454 MEF2CQ06413 473 aaPredicted RBP12.41□□□□□ -0.42
SCAF11-204ENST00000395454 TOR2AQ5JU69 321 aa12.41□□□□□ -0.42
SCAF11-204ENST00000395454 ZC4H2Q9NQZ6 224 aa12.41□□□□□ -0.42
SCAF11-204ENST00000395454 KAAG1Q9UBP8 84 aa12.41□□□□□ -0.42
SCAF11-204ENST00000395454 PFDN2Q9UHV9 154 aa12.41□□□□□ -0.42
SCAF11-204ENST00000395454 MYO9AB2RTY4 2548 aa12.41□□□□□ -0.42
SCAF11-204ENST00000395454 A8MXK9 166 aa12.41□□□□□ -0.42
SCAF11-204ENST00000395454 ST8SIA5O15466 376 aa12.41□□□□□ -0.42
SCAF11-204ENST00000395454 RBFOX2O43251 390 aaKnown RBP eCLIP12.41□□□□□ -0.42
SCAF11-204ENST00000395454 PAX9P55771 341 aa12.41□□□□□ -0.42
SCAF11-204ENST00000395454 EWSR1Q01844 656 aaKnown RBP eCLIP12.41□□□□□ -0.42
SCAF11-204ENST00000395454 BAXQ07812 192 aa12.41□□□□□ -0.42
SCAF11-204ENST00000395454 ODF3L1Q8IXM7 274 aa12.41□□□□□ -0.42
SCAF11-204ENST00000395454 ZNF436-AS1Q8NC38 126 aaPredicted RBP12.41□□□□□ -0.42
SCAF11-204ENST00000395454 ZNF439Q8NDP4 499 aa12.41□□□□□ -0.42
SCAF11-204ENST00000395454 OR10A7Q8NGE5 316 aa12.41□□□□□ -0.42
SCAF11-204ENST00000395454 CD300LFQ8TDQ1 290 aa12.41□□□□□ -0.42
SCAF11-204ENST00000395454 RNF141Q8WVD5 230 aa12.41□□□□□ -0.42
SCAF11-204ENST00000395454 TMED6Q8WW62 240 aa12.41□□□□□ -0.42
SCAF11-204ENST00000395454 RAB40CQ96S21 281 aa12.41□□□□□ -0.42
SCAF11-204ENST00000395454 FOXC2Q99958 501 aa12.41□□□□□ -0.42
SCAF11-204ENST00000395454 TAS2R3Q9NYW6 316 aa12.41□□□□□ -0.42
SCAF11-204ENST00000395454 CACNG5Q9UF02 275 aa12.41□□□□□ -0.42
SCAF11-204ENST00000395454 LINC00312Q9Y6C7 94 aa12.41□□□□□ -0.42
SCAF11-204ENST00000395454 TEX15Q9BXT5 2789 aa12.4□□□□□ -0.42
SCAF11-204ENST00000395454 IGSF23A1L1A6 192 aa12.4□□□□□ -0.42
SCAF11-204ENST00000395454 TMPRSS2O15393 492 aa12.4□□□□□ -0.42
SCAF11-204ENST00000395454 SSSCA1O60232 199 aa12.4□□□□□ -0.42
SCAF11-204ENST00000395454 RAMP3O60896 148 aa12.4□□□□□ -0.42
SCAF11-204ENST00000395454 FCN3O75636 299 aa12.4□□□□□ -0.42
SCAF11-204ENST00000395454 ATG12O94817 140 aa12.4□□□□□ -0.42
SCAF11-204ENST00000395454 DUTP33316 252 aaKnown RBP12.4□□□□□ -0.42
SCAF11-204ENST00000395454 LPAR6P43657 344 aa12.4□□□□□ -0.42
SCAF11-204ENST00000395454 RAB7AP51149 207 aa12.4□□□□□ -0.42
SCAF11-204ENST00000395454 AKR1C2P52895 323 aa12.4□□□□□ -0.42
SCAF11-204ENST00000395454 PRSS57Q6UWY2 283 aa12.4□□□□□ -0.42
SCAF11-204ENST00000395454 FGFRL1Q8N441 504 aa12.4□□□□□ -0.42
SCAF11-204ENST00000395454 TMEM252Q8N6L7 170 aa12.4□□□□□ -0.42
SCAF11-204ENST00000395454 BSCL2Q96G97 398 aaPredicted RBP12.4□□□□□ -0.42
SCAF11-204ENST00000395454 SLC25A31Q9H0C2 315 aa12.4□□□□□ -0.42
SCAF11-204ENST00000395454 WSB1Q9Y6I7 421 aa12.4□□□□□ -0.42
SCAF11-204ENST00000395454 LINC00473A8K010 186 aa12.39□□□□□ -0.43
SCAF11-204ENST00000395454 C17orf98A8MV24 154 aa12.39□□□□□ -0.43
SCAF11-204ENST00000395454 ZNF134P52741 427 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms