RNA–Protein interactions for RNA: ENST00000369733.7

COL17A1-202, Transcript of collagen type XVII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL17A1, Length 5,488 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-202ENST00000369733 RBM14Q96PK6 669 aaKnown RBP13.66□□□□□ -0.22
COL17A1-202ENST00000369733 CRISPLD2Q9H0B8 497 aa13.66□□□□□ -0.22
COL17A1-202ENST00000369733 RALGAPA2Q2PPJ7 1873 aa13.66□□□□□ -0.22
COL17A1-202ENST00000369733 ORM1P02763 201 aa13.66□□□□□ -0.22
COL17A1-202ENST00000369733 INO80CQ6PI98 192 aaPredicted RBP13.66□□□□□ -0.22
COL17A1-202ENST00000369733 THYN1Q9P016 225 aa13.66□□□□□ -0.22
COL17A1-202ENST00000369733 CDC42EP3Q9UKI2 254 aa13.66□□□□□ -0.22
COL17A1-202ENST00000369733 AMMECR1Q9Y4X0 333 aaPredicted RBP13.66□□□□□ -0.22
COL17A1-202ENST00000369733 LTBP4Q8N2S1 1624 aa13.66□□□□□ -0.22
COL17A1-202ENST00000369733 TRBV9A0A0B4J1U6 114 aa13.66□□□□□ -0.22
COL17A1-202ENST00000369733 IGKV3-11P04433 115 aa13.66□□□□□ -0.22
COL17A1-202ENST00000369733 RELBQ01201 579 aa13.66□□□□□ -0.22
COL17A1-202ENST00000369733 HERPUD1Q15011 391 aa13.66□□□□□ -0.22
COL17A1-202ENST00000369733 SCGB1D4Q6XE38 83 aa13.66□□□□□ -0.22
COL17A1-202ENST00000369733 OR10S1Q8NGN2 331 aa13.66□□□□□ -0.22
COL17A1-202ENST00000369733 M0R296 226 aa13.66□□□□□ -0.22
COL17A1-202ENST00000369733 LEPROTL1O95214 131 aa13.66□□□□□ -0.22
COL17A1-202ENST00000369733 MT-CO3P00414 261 aa13.66□□□□□ -0.22
COL17A1-202ENST00000369733 SOX8P57073 446 aa13.66□□□□□ -0.22
COL17A1-202ENST00000369733 SP7Q8TDD2 431 aaPredicted RBP13.66□□□□□ -0.22
COL17A1-202ENST00000369733 RND1Q92730 232 aa13.66□□□□□ -0.22
COL17A1-202ENST00000369733 FOXJ2Q9P0K8 574 aa13.66□□□□□ -0.22
COL17A1-202ENST00000369733 TMSB15BA0A087X1C1 80 aa13.65□□□□□ -0.22
COL17A1-202ENST00000369733 LOC390937A0A1W2PQ73 354 aa13.65□□□□□ -0.22
COL17A1-202ENST00000369733 S1PR2O95136 353 aa13.65□□□□□ -0.22
COL17A1-202ENST00000369733 CYP2G1PQ6ZSU1 146 aa13.65□□□□□ -0.22
COL17A1-202ENST00000369733 SPSB4Q96A44 273 aa13.65□□□□□ -0.22
COL17A1-202ENST00000369733 FBLL1A6NHQ2 334 aaKnown RBP13.65□□□□□ -0.22
COL17A1-202ENST00000369733 SLC25A34Q6PIV7 304 aa13.65□□□□□ -0.22
COL17A1-202ENST00000369733 TMEM108Q6UXF1 575 aa13.65□□□□□ -0.22
COL17A1-202ENST00000369733 TGIF2LYQ8IUE0 185 aa13.65□□□□□ -0.22
COL17A1-202ENST00000369733 APELAP0DMC3 54 aa13.65□□□□□ -0.22
COL17A1-202ENST00000369733 RPL7P18124 248 aaKnown RBP13.65□□□□□ -0.22
COL17A1-202ENST00000369733 LCN2P80188 198 aa13.65□□□□□ -0.22
COL17A1-202ENST00000369733 SDF2L1Q9HCN8 221 aa13.65□□□□□ -0.22
COL17A1-202ENST00000369733 F5H697 171 aa13.65□□□□□ -0.22
COL17A1-202ENST00000369733 PKIBQ9C010 78 aa13.65□□□□□ -0.22
COL17A1-202ENST00000369733 CLEC5AQ9NY25 188 aa13.65□□□□□ -0.22
COL17A1-202ENST00000369733 COLCA2A8K830 154 aa13.64□□□□□ -0.23
COL17A1-202ENST00000369733 FOLR2P14207 255 aa13.64□□□□□ -0.23
COL17A1-202ENST00000369733 CRYBB3P26998 211 aa13.64□□□□□ -0.23
COL17A1-202ENST00000369733 CEBPDP49716 269 aaPredicted RBP13.64□□□□□ -0.23
COL17A1-202ENST00000369733 GNG7O60262 68 aa13.64□□□□□ -0.23
COL17A1-202ENST00000369733 OTX1P32242 354 aaPredicted RBP13.64□□□□□ -0.23
COL17A1-202ENST00000369733 CLDN18P56856 261 aa13.64□□□□□ -0.23
COL17A1-202ENST00000369733 SPSB2Q99619 263 aa13.64□□□□□ -0.23
COL17A1-202ENST00000369733 C5orf52A6NGY3 159 aa13.64□□□□□ -0.23
COL17A1-202ENST00000369733 OR4C46A6NHA9 309 aa13.64□□□□□ -0.23
COL17A1-202ENST00000369733 SHISA7A6NL88 538 aa13.64□□□□□ -0.23
COL17A1-202ENST00000369733 CRYABP02511 175 aaKnown RBP13.64□□□□□ -0.23
COL17A1-202ENST00000369733 COMPP49747 757 aaPredicted RBP13.64□□□□□ -0.23
COL17A1-202ENST00000369733 OR8B3Q8NGG8 313 aa13.64□□□□□ -0.23
COL17A1-202ENST00000369733 FAM222BQ8WU58 562 aa13.64□□□□□ -0.23
COL17A1-202ENST00000369733 PDCD11Q14690 1871 aaKnown RBP13.64□□□□□ -0.23
COL17A1-202ENST00000369733 IGHV3-21A0A0B4J1V1 117 aa13.64□□□□□ -0.23
COL17A1-202ENST00000369733 MARCH11A6NNE9 402 aa13.64□□□□□ -0.23
COL17A1-202ENST00000369733 CEACAM18A8MTB9 384 aa13.64□□□□□ -0.23
COL17A1-202ENST00000369733 LINC00869P0C866 280 aa13.64□□□□□ -0.23
COL17A1-202ENST00000369733 KCNMB1Q16558 191 aa13.64□□□□□ -0.23
COL17A1-202ENST00000369733 RSPO4Q2I0M5 234 aaPredicted RBP13.64□□□□□ -0.23
COL17A1-202ENST00000369733 C10orf128Q5T292 105 aa13.64□□□□□ -0.23
COL17A1-202ENST00000369733 DMRTA1Q5VZB9 504 aa13.64□□□□□ -0.23
COL17A1-202ENST00000369733 TMEM54Q969K7 222 aa13.64□□□□□ -0.23
COL17A1-202ENST00000369733 WDYHV1Q96HA8 205 aa13.64□□□□□ -0.23
COL17A1-202ENST00000369733 WNT5BQ9H1J7 359 aa13.64□□□□□ -0.23
COL17A1-202ENST00000369733 PATJQ8NI35 1801 aa13.64□□□□□ -0.23
COL17A1-202ENST00000369733 IGHV1-45A0A0A0MS14 117 aa13.63□□□□□ -0.23
COL17A1-202ENST00000369733 LRRC75BQ2VPJ9 315 aa13.63□□□□□ -0.23
COL17A1-202ENST00000369733 TGFBR3LH3BV60 316 aa13.63□□□□□ -0.23
COL17A1-202ENST00000369733 PSMB2P49721 201 aa13.63□□□□□ -0.23
COL17A1-202ENST00000369733 ZCCHC14Q8WYQ9 949 aaKnown RBP13.63□□□□□ -0.23
COL17A1-202ENST00000369733 SNRNP40Q96DI7 357 aaKnown RBP13.63□□□□□ -0.23
COL17A1-202ENST00000369733 COL25A1Q9BXS0 654 aaPredicted RBP13.63□□□□□ -0.23
COL17A1-202ENST00000369733 PRDM14Q9GZV8 571 aa13.63□□□□□ -0.23
COL17A1-202ENST00000369733 HIGD1AQ9Y241 93 aa13.63□□□□□ -0.23
COL17A1-202ENST00000369733 HYPMO75409 117 aa13.63□□□□□ -0.23
COL17A1-202ENST00000369733 ICAM4Q14773 271 aa13.63□□□□□ -0.23
COL17A1-202ENST00000369733 MRPL37Q9BZE1 423 aaKnown RBP13.63□□□□□ -0.23
COL17A1-202ENST00000369733 TTTY12Q9BZ98 90 aa13.63□□□□□ -0.23
COL17A1-202ENST00000369733 NUBP1P53384 320 aa13.63□□□□□ -0.23
COL17A1-202ENST00000369733 DRAM1Q8N682 238 aa13.63□□□□□ -0.23
COL17A1-202ENST00000369733 MGST3O14880 152 aa13.62□□□□□ -0.23
COL17A1-202ENST00000369733 REG1BP48304 166 aa13.62□□□□□ -0.23
COL17A1-202ENST00000369733 SRXN1Q9BYN0 137 aa13.62□□□□□ -0.23
COL17A1-202ENST00000369733 SEC16AO15027 2179 aa13.62□□□□□ -0.23
COL17A1-202ENST00000369733 HIST1H2BKO60814 126 aa13.62□□□□□ -0.23
COL17A1-202ENST00000369733 HIST1H2BJP06899 126 aa13.62□□□□□ -0.23
COL17A1-202ENST00000369733 HIST1H2BOP23527 126 aa13.62□□□□□ -0.23
COL17A1-202ENST00000369733 MPZP25189 248 aa13.62□□□□□ -0.23
COL17A1-202ENST00000369733 HIST1H2BBP33778 126 aa13.62□□□□□ -0.23
COL17A1-202ENST00000369733 HIST1H2BDP58876 126 aa13.62□□□□□ -0.23
COL17A1-202ENST00000369733 HIST1H2BCP62807 126 aa13.62□□□□□ -0.23
COL17A1-202ENST00000369733 HIST2H2BEQ16778 126 aa13.62□□□□□ -0.23
COL17A1-202ENST00000369733 HIST2H2BFQ5QNW6 126 aaPredicted RBP13.62□□□□□ -0.23
COL17A1-202ENST00000369733 MYOZ3Q8TDC0 251 aa13.62□□□□□ -0.23
COL17A1-202ENST00000369733 HIST1H2BHQ93079 126 aa13.62□□□□□ -0.23
COL17A1-202ENST00000369733 HIST1H2BNQ99877 126 aa13.62□□□□□ -0.23
COL17A1-202ENST00000369733 HIST1H2BMQ99879 126 aa13.62□□□□□ -0.23
COL17A1-202ENST00000369733 TMEM265A0A087WTH1 108 aa13.62□□□□□ -0.23
COL17A1-202ENST00000369733 TRGV8A0A0C4DH27 118 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms