RNA–Protein interactions for RNA: ENST00000343200.9

VCAN-203, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 9,455 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-203ENST00000343200 ZNF479Q96JC4 524 aa5.4□□□□□ -1.54
VCAN-203ENST00000343200 CHST5Q9GZS9 411 aa5.4□□□□□ -1.54
VCAN-203ENST00000343200 LTBP4Q8N2S1 1624 aa5.4□□□□□ -1.54
VCAN-203ENST00000343200 H0YL77 283 aa5.4□□□□□ -1.54
VCAN-203ENST00000343200 LDLRAD4O15165 306 aa5.4□□□□□ -1.54
VCAN-203ENST00000343200 HOXA5P20719 270 aa5.4□□□□□ -1.54
VCAN-203ENST00000343200 CYB561P49447 251 aa5.4□□□□□ -1.54
VCAN-203ENST00000343200 RPS11P62280 158 aaKnown RBP eCLIP5.4□□□□□ -1.54
VCAN-203ENST00000343200 GNG3P63215 75 aa5.4□□□□□ -1.54
VCAN-203ENST00000343200 TMEM170BQ5T4T1 132 aa5.4□□□□□ -1.54
VCAN-203ENST00000343200 ANKRD33Q7Z3H0 272 aa5.4□□□□□ -1.54
VCAN-203ENST00000343200 LRTM2Q8N967 370 aa5.4□□□□□ -1.54
VCAN-203ENST00000343200 C12orf49Q9H741 205 aa5.4□□□□□ -1.54
VCAN-203ENST00000343200 BCL2L10Q9HD36 194 aa5.4□□□□□ -1.54
VCAN-203ENST00000343200 INSL6Q9Y581 213 aa5.4□□□□□ -1.54
VCAN-203ENST00000343200 J3KT08 172 aa5.4□□□□□ -1.55
VCAN-203ENST00000343200 PPYP01298 95 aa5.4□□□□□ -1.55
VCAN-203ENST00000343200 KLKB1P03952 638 aa5.4□□□□□ -1.55
VCAN-203ENST00000343200 P2RY2P41231 377 aa5.4□□□□□ -1.55
VCAN-203ENST00000343200 HIST1H4AP62805 103 aaKnown RBP5.4□□□□□ -1.55
VCAN-203ENST00000343200 TMEM186Q96B77 213 aa5.4□□□□□ -1.55
VCAN-203ENST00000343200 HDGFL3Q9Y3E1 203 aa5.4□□□□□ -1.55
VCAN-203ENST00000343200 RTP5Q14D33 572 aa5.4□□□□□ -1.55
VCAN-203ENST00000343200 LRRC75BQ2VPJ9 315 aa5.4□□□□□ -1.55
VCAN-203ENST00000343200 KRTCAP3Q53RY4 240 aa5.4□□□□□ -1.55
VCAN-203ENST00000343200 MARCH3Q86UD3 253 aa5.4□□□□□ -1.55
VCAN-203ENST00000343200 NAT6Q93015 286 aa5.4□□□□□ -1.55
VCAN-203ENST00000343200 RBPJLQ9UBG7 517 aa5.4□□□□□ -1.55
VCAN-203ENST00000343200 PPT2Q9UMR5 302 aa5.4□□□□□ -1.55
VCAN-203ENST00000343200 LOC105371242A0A075B767 164 aa5.4□□□□□ -1.55
VCAN-203ENST00000343200 PPIAL4CA0A0B4J2A2 164 aa5.4□□□□□ -1.55
VCAN-203ENST00000343200 PPIAL4GP0DN37 164 aa5.4□□□□□ -1.55
VCAN-203ENST00000343200 B4GALT1P15291 398 aa5.4□□□□□ -1.55
VCAN-203ENST00000343200 NUBP1P53384 320 aa5.4□□□□□ -1.55
VCAN-203ENST00000343200 RRN3P1Q2M238 152 aa5.4□□□□□ -1.55
VCAN-203ENST00000343200 ADAMTSL4Q6UY14 1074 aa5.4□□□□□ -1.55
VCAN-203ENST00000343200 CLEC4DQ8WXI8 215 aa5.4□□□□□ -1.55
VCAN-203ENST00000343200 TOX2Q96NM4 488 aa5.4□□□□□ -1.55
VCAN-203ENST00000343200 SDF2Q99470 211 aa5.4□□□□□ -1.55
VCAN-203ENST00000343200 TMEM126AQ9H061 195 aa5.4□□□□□ -1.55
VCAN-203ENST00000343200 THSD7AQ9UPZ6 1657 aa5.4□□□□□ -1.55
VCAN-203ENST00000343200 TRAV30A0A087WSZ9 112 aa5.39□□□□□ -1.55
VCAN-203ENST00000343200 LINC01553A4QN01 128 aa5.39□□□□□ -1.55
VCAN-203ENST00000343200 ITGB1BP1O14713 200 aa5.39□□□□□ -1.55
VCAN-203ENST00000343200 ASAH2BP0C7U1 165 aa5.39□□□□□ -1.55
VCAN-203ENST00000343200 CEACAM3P40198 252 aa5.39□□□□□ -1.55
VCAN-203ENST00000343200 STARD6P59095 220 aa5.39□□□□□ -1.55
VCAN-203ENST00000343200 TM4SF20Q53R12 229 aa5.39□□□□□ -1.55
VCAN-203ENST00000343200 Q6ZSR6 202 aa5.39□□□□□ -1.55
VCAN-203ENST00000343200 PNPLA5Q7Z6Z6 429 aaPredicted RBP5.39□□□□□ -1.55
VCAN-203ENST00000343200 BOD1L2Q8IYS8 172 aa5.39□□□□□ -1.55
VCAN-203ENST00000343200 DYNLRB2Q8TF09 96 aa5.39□□□□□ -1.55
VCAN-203ENST00000343200 HIST1H2BLQ99880 126 aa5.39□□□□□ -1.55
VCAN-203ENST00000343200 PSMB5P28074 263 aa5.39□□□□□ -1.55
VCAN-203ENST00000343200 TMEM78Q5T7P6 136 aa5.39□□□□□ -1.55
VCAN-203ENST00000343200 MOB3BQ86TA1 216 aa5.39□□□□□ -1.55
VCAN-203ENST00000343200 FAM222BQ8WU58 562 aa5.39□□□□□ -1.55
VCAN-203ENST00000343200 C17orf51A8MQB3 221 aa5.39□□□□□ -1.55
VCAN-203ENST00000343200 KLRC4-KLRK1H3BQV0 150 aa5.39□□□□□ -1.55
VCAN-203ENST00000343200 ZNF205O95201 554 aa5.39□□□□□ -1.55
VCAN-203ENST00000343200 CNTFRP26992 372 aa5.39□□□□□ -1.55
VCAN-203ENST00000343200 HOXC13P31276 330 aa5.39□□□□□ -1.55
VCAN-203ENST00000343200 MVDP53602 400 aa5.39□□□□□ -1.55
VCAN-203ENST00000343200 ZNF79Q15937 498 aa5.39□□□□□ -1.55
VCAN-203ENST00000343200 NFAM1Q8NET5 270 aaPredicted RBP5.39□□□□□ -1.55
VCAN-203ENST00000343200 OR13H1Q8NG92 308 aa5.39□□□□□ -1.55
VCAN-203ENST00000343200 PLPPR1Q8TBJ4 325 aa5.39□□□□□ -1.55
VCAN-203ENST00000343200 SPSB4Q96A44 273 aa5.39□□□□□ -1.55
VCAN-203ENST00000343200 HCFC2Q9Y5Z7 792 aa5.39□□□□□ -1.55
VCAN-203ENST00000343200 A0A0U1RQF3 1178 aa5.39□□□□□ -1.55
VCAN-203ENST00000343200 NKX2-6A6NCS4 301 aa5.39□□□□□ -1.55
VCAN-203ENST00000343200 SNAI1O95863 264 aaPredicted RBP5.39□□□□□ -1.55
VCAN-203ENST00000343200 SP9P0CG40 484 aa5.39□□□□□ -1.55
VCAN-203ENST00000343200 TNFRSF1AP19438 455 aa5.39□□□□□ -1.55
VCAN-203ENST00000343200 HSPE1P61604 102 aaKnown RBP5.39□□□□□ -1.55
VCAN-203ENST00000343200 ZNF117Q03924 483 aa5.39□□□□□ -1.55
VCAN-203ENST00000343200 INSL4Q14641 139 aa5.39□□□□□ -1.55
VCAN-203ENST00000343200 ZNF56Q15929 161 aa5.39□□□□□ -1.55
VCAN-203ENST00000343200 ZNF740Q8NDX6 193 aa5.39□□□□□ -1.55
VCAN-203ENST00000343200 METTL26Q96S19 204 aa5.39□□□□□ -1.55
VCAN-203ENST00000343200 CST9LQ9H4G1 147 aa5.39□□□□□ -1.55
VCAN-203ENST00000343200 FAM181BA6NEQ2 426 aa5.39□□□□□ -1.55
VCAN-203ENST00000343200 SOX8P57073 446 aa5.39□□□□□ -1.55
VCAN-203ENST00000343200 SELENOTP62341 195 aa5.39□□□□□ -1.55
VCAN-203ENST00000343200 PSG9Q00887 426 aa5.39□□□□□ -1.55
VCAN-203ENST00000343200 TMEM211Q6ICI0 200 aa5.39□□□□□ -1.55
VCAN-203ENST00000343200 OR4D9Q8NGE8 314 aa5.39□□□□□ -1.55
VCAN-203ENST00000343200 APOBEC4Q8WW27 367 aaKnown RBP5.39□□□□□ -1.55
VCAN-203ENST00000343200 TRMT61AQ96FX7 289 aaKnown RBP5.39□□□□□ -1.55
VCAN-203ENST00000343200 PTGESO14684 152 aa5.39□□□□□ -1.55
VCAN-203ENST00000343200 SOD2P04179 222 aa5.39□□□□□ -1.55
VCAN-203ENST00000343200 ZNF865P0CJ78 1059 aaPredicted RBP5.39□□□□□ -1.55
VCAN-203ENST00000343200 HOXD3P31249 432 aaPredicted RBP5.39□□□□□ -1.55
VCAN-203ENST00000343200 LYG1Q8N1E2 194 aa5.39□□□□□ -1.55
VCAN-203ENST00000343200 CHCHD1Q96BP2 118 aaKnown RBP5.39□□□□□ -1.55
VCAN-203ENST00000343200 ABHD14AQ9BUJ0 271 aa5.39□□□□□ -1.55
VCAN-203ENST00000343200 TMEM222Q9H0R3 208 aa5.39□□□□□ -1.55
VCAN-203ENST00000343200 NRN1Q9NPD7 142 aa5.39□□□□□ -1.55
VCAN-203ENST00000343200 GFYI3L273 518 aa5.39□□□□□ -1.55
VCAN-203ENST00000343200 NDUFS6O75380 124 aaKnown RBP5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 108.3 ms