RNA–Protein interactions for RNA: ENST00000329553.2

RIPPLY3-201, Transcript of ripply transcriptional repressor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RIPPLY3, Length 2,235 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIPPLY3-201ENST00000329553 BIN3Q9NQY0 253 aa16.78■□□□□ 0.28
RIPPLY3-201ENST00000329553 CALYQ9NYX4 217 aa16.78■□□□□ 0.28
RIPPLY3-201ENST00000329553 IGHV1-69-2A0A0G2JMI3 117 aa16.77■□□□□ 0.28
RIPPLY3-201ENST00000329553 LOXL3P58215 753 aa16.77■□□□□ 0.28
RIPPLY3-201ENST00000329553 OR2C3Q8N628 320 aa16.77■□□□□ 0.28
RIPPLY3-201ENST00000329553 C15orf54Q8N8G6 183 aa16.77■□□□□ 0.28
RIPPLY3-201ENST00000329553 TANC2Q9HCD6 1990 aa16.77■□□□□ 0.28
RIPPLY3-201ENST00000329553 CACNA1BQ00975 2339 aa16.77■□□□□ 0.27
RIPPLY3-201ENST00000329553 NKX6-3A6NJ46 265 aa16.77■□□□□ 0.27
RIPPLY3-201ENST00000329553 F2RL2O00254 374 aa16.77■□□□□ 0.27
RIPPLY3-201ENST00000329553 TNFRSF13BO14836 293 aaPredicted RBP16.77■□□□□ 0.27
RIPPLY3-201ENST00000329553 ZNF16P17020 682 aaPredicted RBP16.77■□□□□ 0.27
RIPPLY3-201ENST00000329553 MORN2Q502X0 79 aa16.77■□□□□ 0.27
RIPPLY3-201ENST00000329553 ETV3LQ6ZN32 361 aa16.77■□□□□ 0.27
RIPPLY3-201ENST00000329553 TCF23Q7RTU1 214 aa16.77■□□□□ 0.27
RIPPLY3-201ENST00000329553 IL22RA2Q969J5 263 aa16.77■□□□□ 0.27
RIPPLY3-201ENST00000329553 AGMATQ9BSE5 352 aa16.77■□□□□ 0.27
RIPPLY3-201ENST00000329553 GNG12Q9UBI6 72 aa16.77■□□□□ 0.27
RIPPLY3-201ENST00000329553 C1QL1O75973 258 aa16.76■□□□□ 0.27
RIPPLY3-201ENST00000329553 SERPINE2P07093 398 aa16.76■□□□□ 0.27
RIPPLY3-201ENST00000329553 AGAP20933 346 aa16.76■□□□□ 0.27
RIPPLY3-201ENST00000329553 HSD17B11Q8NBQ5 300 aa16.76■□□□□ 0.27
RIPPLY3-201ENST00000329553 ZBTB34Q8NCN2 500 aa16.76■□□□□ 0.27
RIPPLY3-201ENST00000329553 ABHD14BQ96IU4 210 aa16.76■□□□□ 0.27
RIPPLY3-201ENST00000329553 JPT1Q9UK76 154 aa16.76■□□□□ 0.27
RIPPLY3-201ENST00000329553 PSG11Q9UQ72 335 aa16.76■□□□□ 0.27
RIPPLY3-201ENST00000329553 DUXBA0A1W2PPF3 345 aa16.76■□□□□ 0.27
RIPPLY3-201ENST00000329553 ST8SIA5O15466 376 aa16.76■□□□□ 0.27
RIPPLY3-201ENST00000329553 FCN3O75636 299 aa16.76■□□□□ 0.27
RIPPLY3-201ENST00000329553 VDAC1P21796 283 aa16.76■□□□□ 0.27
RIPPLY3-201ENST00000329553 NKX2-1P43699 371 aaPredicted RBP16.76■□□□□ 0.27
RIPPLY3-201ENST00000329553 EIF4EBP1Q13541 118 aaPredicted RBP16.76■□□□□ 0.27
RIPPLY3-201ENST00000329553 ZNF585BQ52M93 769 aa16.76■□□□□ 0.27
RIPPLY3-201ENST00000329553 NMSQ5H8A3 153 aa16.76■□□□□ 0.27
RIPPLY3-201ENST00000329553 LYPD2Q6UXB3 125 aa16.76■□□□□ 0.27
RIPPLY3-201ENST00000329553 TRGV10A0A0A0MS01 117 aa16.75■□□□□ 0.27
RIPPLY3-201ENST00000329553 KBTBD11-OT1A0A1B0GTJ5 212 aa16.75■□□□□ 0.27
RIPPLY3-201ENST00000329553 CLEC18AA5D8T8 446 aa16.75■□□□□ 0.27
RIPPLY3-201ENST00000329553 ADAM20O43506 726 aa16.75■□□□□ 0.27
RIPPLY3-201ENST00000329553 YPEL1O60688 119 aa16.75■□□□□ 0.27
RIPPLY3-201ENST00000329553 PRH1P02810 166 aa16.75■□□□□ 0.27
RIPPLY3-201ENST00000329553 NDUFB7P17568 137 aa16.75■□□□□ 0.27
RIPPLY3-201ENST00000329553 CLEC18CQ8NCF0 446 aa16.75■□□□□ 0.27
RIPPLY3-201ENST00000329553 YPEL2Q96QA6 119 aa16.75■□□□□ 0.27
RIPPLY3-201ENST00000329553 SPIN2AQ99865 258 aa16.75■□□□□ 0.27
RIPPLY3-201ENST00000329553 SPIN2BQ9BPZ2 258 aa16.75■□□□□ 0.27
RIPPLY3-201ENST00000329553 PLEKHF2Q9H8W4 249 aa16.75■□□□□ 0.27
RIPPLY3-201ENST00000329553 SLC25A10Q9UBX3 287 aaPredicted RBP16.75■□□□□ 0.27
RIPPLY3-201ENST00000329553 CLN8Q9UBY8 286 aa16.75■□□□□ 0.27
RIPPLY3-201ENST00000329553 FAM24AA6NFZ4 105 aa16.74■□□□□ 0.27
RIPPLY3-201ENST00000329553 LYNX1G3V0Z9 82 aa16.74■□□□□ 0.27
RIPPLY3-201ENST00000329553 IGKV1-39P01597 117 aa16.74■□□□□ 0.27
RIPPLY3-201ENST00000329553 IGHV3-7P01780 117 aa16.74■□□□□ 0.27
RIPPLY3-201ENST00000329553 IGKV1D-39P04432 117 aa16.74■□□□□ 0.27
RIPPLY3-201ENST00000329553 LYNX1P0DP58 116 aa16.74■□□□□ 0.27
RIPPLY3-201ENST00000329553 COL8A2P25067 703 aa16.74■□□□□ 0.27
RIPPLY3-201ENST00000329553 UTF1Q5T230 341 aa16.74■□□□□ 0.27
RIPPLY3-201ENST00000329553 CLCC1Q96S66 551 aa16.74■□□□□ 0.27
RIPPLY3-201ENST00000329553 EIF5A2Q9GZV4 153 aaKnown RBP16.74■□□□□ 0.27
RIPPLY3-201ENST00000329553 IGSF23A1L1A6 192 aa16.74■□□□□ 0.27
RIPPLY3-201ENST00000329553 PITX3O75364 302 aa16.74■□□□□ 0.27
RIPPLY3-201ENST00000329553 POLR2GP62487 172 aaKnown RBP eCLIP16.74■□□□□ 0.27
RIPPLY3-201ENST00000329553 RPL30P62888 115 aaKnown RBP16.74■□□□□ 0.27
RIPPLY3-201ENST00000329553 EDARADDQ8WWZ3 215 aa16.74■□□□□ 0.27
RIPPLY3-201ENST00000329553 CORO2AQ92828 525 aa16.74■□□□□ 0.27
RIPPLY3-201ENST00000329553 LYRM2Q9NU23 88 aaPredicted RBP16.74■□□□□ 0.27
RIPPLY3-201ENST00000329553 LIN7CQ9NUP9 197 aaKnown RBP16.74■□□□□ 0.27
RIPPLY3-201ENST00000329553 IGSF10Q6WRI0 2623 aa16.74■□□□□ 0.27
RIPPLY3-201ENST00000329553 A0A1B0GW64 132 aa16.73■□□□□ 0.27
RIPPLY3-201ENST00000329553 RPL35P42766 123 aaKnown RBP16.73■□□□□ 0.27
RIPPLY3-201ENST00000329553 ZNF134P52741 427 aa16.73■□□□□ 0.27
RIPPLY3-201ENST00000329553 ZNF266Q14584 549 aa16.73■□□□□ 0.27
RIPPLY3-201ENST00000329553 BTNL3Q6UXE8 466 aa16.73■□□□□ 0.27
RIPPLY3-201ENST00000329553 RPS10P5Q9NQ39 176 aa16.73■□□□□ 0.27
RIPPLY3-201ENST00000329553 USF3Q68DE3 2245 aa16.73■□□□□ 0.27
RIPPLY3-201ENST00000329553 A0A0G2JRQ6 117 aa16.73■□□□□ 0.27
RIPPLY3-201ENST00000329553 ZNF98A6NK75 572 aa16.73■□□□□ 0.27
RIPPLY3-201ENST00000329553 PPOXP50336 477 aa16.73■□□□□ 0.27
RIPPLY3-201ENST00000329553 AKR1D1P51857 326 aa16.73■□□□□ 0.27
RIPPLY3-201ENST00000329553 MSMO1Q15800 293 aa16.73■□□□□ 0.27
RIPPLY3-201ENST00000329553 AWAT1Q58HT5 328 aa16.73■□□□□ 0.27
RIPPLY3-201ENST00000329553 TMEM182Q6ZP80 229 aaPredicted RBP16.73■□□□□ 0.27
RIPPLY3-201ENST00000329553 LFNGQ8NES3 379 aa16.73■□□□□ 0.27
RIPPLY3-201ENST00000329553 TUBA4BQ9H853 241 aa16.73■□□□□ 0.27
RIPPLY3-201ENST00000329553 COA4Q9NYJ1 87 aa16.73■□□□□ 0.27
RIPPLY3-201ENST00000329553 LRBAP50851 2863 aa16.73■□□□□ 0.27
RIPPLY3-201ENST00000329553 RNF212BA8MTL3 300 aa16.72■□□□□ 0.27
RIPPLY3-201ENST00000329553 C19orf84I3L1E1 186 aa16.72■□□□□ 0.27
RIPPLY3-201ENST00000329553 HABP2Q14520 560 aaPredicted RBP16.72■□□□□ 0.27
RIPPLY3-201ENST00000329553 ZFP82Q8N141 532 aa16.72■□□□□ 0.27
RIPPLY3-201ENST00000329553 TMEM252Q8N6L7 170 aa16.72■□□□□ 0.27
RIPPLY3-201ENST00000329553 C2CD4CQ8TF44 421 aa16.72■□□□□ 0.27
RIPPLY3-201ENST00000329553 HIST1H2BAQ96A08 127 aa16.72■□□□□ 0.27
RIPPLY3-201ENST00000329553 PBDC1Q9BVG4 233 aa16.72■□□□□ 0.27
RIPPLY3-201ENST00000329553 C7orf77A4D0Y5 90 aa16.72■□□□□ 0.27
RIPPLY3-201ENST00000329553 PROP1O75360 226 aa16.72■□□□□ 0.27
RIPPLY3-201ENST00000329553 AKR1C3P42330 323 aa16.72■□□□□ 0.27
RIPPLY3-201ENST00000329553 LINC00205P59089 165 aa16.72■□□□□ 0.27
RIPPLY3-201ENST00000329553 ID3Q02535 119 aa16.72■□□□□ 0.27
RIPPLY3-201ENST00000329553 AKIRIN2Q53H80 203 aa16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms