RNA–Protein interactions for RNA: ENST00000249923.7

COPB1-201, Transcript of coatomer protein complex subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPB1, Length 3,481 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-201ENST00000249923 PLGLB1Q02325 96 aa8.5□□□□□ -1.05
COPB1-201ENST00000249923 FAM78BQ5VT40 261 aa8.5□□□□□ -1.05
COPB1-201ENST00000249923 FBXW9Q5XUX1 488 aa8.5□□□□□ -1.05
COPB1-201ENST00000249923 C16orf82Q7Z2V1 217 aa8.5□□□□□ -1.05
COPB1-201ENST00000249923 ABHD5Q8WTS1 349 aa8.5□□□□□ -1.05
COPB1-201ENST00000249923 HIST1H2BLQ99880 126 aa8.5□□□□□ -1.05
COPB1-201ENST00000249923 MAP1LC3BQ9GZQ8 125 aa8.5□□□□□ -1.05
COPB1-201ENST00000249923 MED13LQ71F56 2210 aa8.5□□□□□ -1.05
COPB1-201ENST00000249923 PGPEP1LA6NFU8 196 aa8.5□□□□□ -1.05
COPB1-201ENST00000249923 WNT9BO14905 357 aa8.5□□□□□ -1.05
COPB1-201ENST00000249923 DEGS1O15121 323 aa8.5□□□□□ -1.05
COPB1-201ENST00000249923 ZNF737O75373 536 aa8.5□□□□□ -1.05
COPB1-201ENST00000249923 HBE1P02100 147 aa8.5□□□□□ -1.05
COPB1-201ENST00000249923 COL10A1Q03692 680 aa8.5□□□□□ -1.05
COPB1-201ENST00000249923 ZNF816Q0VGE8 651 aaPredicted RBP8.5□□□□□ -1.05
COPB1-201ENST00000249923 SRSF6Q13247 344 aaKnown RBP8.5□□□□□ -1.05
COPB1-201ENST00000249923 EIF4EBP1Q13541 118 aaPredicted RBP8.5□□□□□ -1.05
COPB1-201ENST00000249923 ERASQ7Z444 233 aa8.5□□□□□ -1.05
COPB1-201ENST00000249923 REC114Q7Z4M0 266 aa8.5□□□□□ -1.05
COPB1-201ENST00000249923 HIST3H2BBQ8N257 126 aa8.5□□□□□ -1.05
COPB1-201ENST00000249923 DRAM1Q8N682 238 aa8.5□□□□□ -1.05
COPB1-201ENST00000249923 OR10A7Q8NGE5 316 aa8.5□□□□□ -1.05
COPB1-201ENST00000249923 RBKSQ9H477 322 aa8.5□□□□□ -1.05
COPB1-201ENST00000249923 SIRT7Q9NRC8 400 aa8.5□□□□□ -1.05
COPB1-201ENST00000249923 PSENENQ9NZ42 101 aa8.5□□□□□ -1.05
COPB1-201ENST00000249923 CACNA1BQ00975 2339 aa8.5□□□□□ -1.05
COPB1-201ENST00000249923 PCNX1Q96RV3 2341 aa8.5□□□□□ -1.05
COPB1-201ENST00000249923 EREGO14944 169 aa8.5□□□□□ -1.05
COPB1-201ENST00000249923 ZNF883P0CG24 379 aa8.5□□□□□ -1.05
COPB1-201ENST00000249923 MPV17P39210 176 aa8.5□□□□□ -1.05
COPB1-201ENST00000249923 RPL30P62888 115 aaKnown RBP8.5□□□□□ -1.05
COPB1-201ENST00000249923 C11orf53Q8IXP5 236 aa8.5□□□□□ -1.05
COPB1-201ENST00000249923 STRADBQ9C0K7 418 aa8.5□□□□□ -1.05
COPB1-201ENST00000249923 RIMS4Q9H426 269 aaPredicted RBP8.5□□□□□ -1.05
COPB1-201ENST00000249923 RYDENQ9NUL5 291 aaKnown RBP8.5□□□□□ -1.05
COPB1-201ENST00000249923 WNK2Q9Y3S1 2297 aa8.49□□□□□ -1.05
COPB1-201ENST00000249923 LOC102723971A0A1B0GUV8 181 aa8.49□□□□□ -1.05
COPB1-201ENST00000249923 C21orf140B9A014 251 aa8.49□□□□□ -1.05
COPB1-201ENST00000249923 MLNRO43193 412 aa8.49□□□□□ -1.05
COPB1-201ENST00000249923 HSPB1P04792 205 aaKnown RBP8.49□□□□□ -1.05
COPB1-201ENST00000249923 SLC25A6P12236 298 aa8.49□□□□□ -1.05
COPB1-201ENST00000249923 IGHV1-2P23083 117 aa8.49□□□□□ -1.05
COPB1-201ENST00000249923 TFPI2P48307 235 aa8.49□□□□□ -1.05
COPB1-201ENST00000249923 PRSS8Q16651 343 aa8.49□□□□□ -1.05
COPB1-201ENST00000249923 DHRS13Q6UX07 377 aa8.49□□□□□ -1.05
COPB1-201ENST00000249923 GCNT2Q8N0V5 402 aa8.49□□□□□ -1.05
COPB1-201ENST00000249923 GATAD1Q8WUU5 269 aa8.49□□□□□ -1.05
COPB1-201ENST00000249923 GNPNAT1Q96EK6 184 aaPredicted RBP8.49□□□□□ -1.05
COPB1-201ENST00000249923 SELENOKQ9Y6D0 94 aa8.49□□□□□ -1.05
COPB1-201ENST00000249923 IFNA1P01562 189 aa8.49□□□□□ -1.05
COPB1-201ENST00000249923 P0C879 139 aa8.49□□□□□ -1.05
COPB1-201ENST00000249923 THBS3P49746 956 aa8.49□□□□□ -1.05
COPB1-201ENST00000249923 KRTDAPP60985 99 aa8.49□□□□□ -1.05
COPB1-201ENST00000249923 PLP2Q04941 152 aa8.49□□□□□ -1.05
COPB1-201ENST00000249923 PSG7Q13046 419 aa8.49□□□□□ -1.05
COPB1-201ENST00000249923 ZNF146Q15072 292 aa8.49□□□□□ -1.05
COPB1-201ENST00000249923 ZNF826PQ6ZT77 177 aa8.49□□□□□ -1.05
COPB1-201ENST00000249923 CXorf67Q86X51 503 aaPredicted RBP8.49□□□□□ -1.05
COPB1-201ENST00000249923 BAGE3Q86Y29 109 aa8.49□□□□□ -1.05
COPB1-201ENST00000249923 BAGE2Q86Y30 109 aa8.49□□□□□ -1.05
COPB1-201ENST00000249923 C1QL4Q86Z23 238 aa8.49□□□□□ -1.05
COPB1-201ENST00000249923 SMDT1Q9H4I9 107 aa8.49□□□□□ -1.05
COPB1-201ENST00000249923 PRDM13Q9H4Q3 707 aa8.49□□□□□ -1.05
COPB1-201ENST00000249923 GCM1Q9NP62 436 aa8.49□□□□□ -1.05
COPB1-201ENST00000249923 GALR2O43603 387 aaPredicted RBP8.49□□□□□ -1.05
COPB1-201ENST00000249923 SYNGR2O43760 224 aa8.49□□□□□ -1.05
COPB1-201ENST00000249923 LYZL6O75951 148 aa8.49□□□□□ -1.05
COPB1-201ENST00000249923 OR4A8P0C604 315 aa8.49□□□□□ -1.05
COPB1-201ENST00000249923 NTF3P20783 257 aa8.49□□□□□ -1.05
COPB1-201ENST00000249923 PAX5Q02548 391 aa8.49□□□□□ -1.05
COPB1-201ENST00000249923 PLA2G2CQ5R387 149 aa8.49□□□□□ -1.05
COPB1-201ENST00000249923 ETFRF1Q6IPR1 90 aa8.49□□□□□ -1.05
COPB1-201ENST00000249923 OR1L1Q8NH94 360 aa8.49□□□□□ -1.05
COPB1-201ENST00000249923 RCC1LQ96I51 464 aaKnown RBP8.49□□□□□ -1.05
COPB1-201ENST00000249923 MS4A10Q96PG2 267 aa8.49□□□□□ -1.05
COPB1-201ENST00000249923 TRAPPC2LQ9UL33 140 aa8.49□□□□□ -1.05
COPB1-201ENST00000249923 WIPI2Q9Y4P8 454 aa8.49□□□□□ -1.05
COPB1-201ENST00000249923 PCNX2A6NKB5 2137 aa8.48□□□□□ -1.05
COPB1-201ENST00000249923 RELNP78509 3460 aa8.48□□□□□ -1.05
COPB1-201ENST00000249923 TRAV1-1A0A0B4J248 108 aa8.48□□□□□ -1.05
COPB1-201ENST00000249923 AQP7O14520 342 aa8.48□□□□□ -1.05
COPB1-201ENST00000249923 OR5I1Q13606 314 aa8.48□□□□□ -1.05
COPB1-201ENST00000249923 BSXQ3C1V8 233 aa8.48□□□□□ -1.05
COPB1-201ENST00000249923 BTNL3Q6UXE8 466 aa8.48□□□□□ -1.05
COPB1-201ENST00000249923 ZNF664Q8N3J9 261 aa8.48□□□□□ -1.05
COPB1-201ENST00000249923 ST6GALNAC3Q8NDV1 305 aa8.48□□□□□ -1.05
COPB1-201ENST00000249923 LSM10Q969L4 123 aaKnown RBP8.48□□□□□ -1.05
COPB1-201ENST00000249923 TMEM18Q96B42 140 aa8.48□□□□□ -1.05
COPB1-201ENST00000249923 BTF3L4Q96K17 158 aa8.48□□□□□ -1.05
COPB1-201ENST00000249923 SERTAD4Q9NUC0 356 aa8.48□□□□□ -1.05
COPB1-201ENST00000249923 METRNQ9UJH8 293 aa8.48□□□□□ -1.05
COPB1-201ENST00000249923 LRP5LA4QPB2 252 aa8.48□□□□□ -1.05
COPB1-201ENST00000249923 CEACAM6P40199 344 aa8.48□□□□□ -1.05
COPB1-201ENST00000249923 GLIPR1P48060 266 aa8.48□□□□□ -1.05
COPB1-201ENST00000249923 PSMB3P49720 205 aa8.48□□□□□ -1.05
COPB1-201ENST00000249923 TAS2R60P59551 318 aa8.48□□□□□ -1.05
COPB1-201ENST00000249923 SLC10A1Q14973 349 aa8.48□□□□□ -1.05
COPB1-201ENST00000249923 OR4X1Q8NH49 305 aa8.48□□□□□ -1.05
COPB1-201ENST00000249923 SLC25A40Q8TBP6 338 aa8.48□□□□□ -1.05
COPB1-201ENST00000249923 VN1R17PQ8TDU5 208 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 90 ms