RNA–Protein interactions for RNA: ENST00000602557.5

CSMD1-216, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 11,740 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-216ENST00000602557 TNFRSF19Q9NS68 423 aa7.6□□□□□ -1.19
CSMD1-216ENST00000602557 H3BUT2 72 aa7.6□□□□□ -1.19
CSMD1-216ENST00000602557 CELA2BP08218 269 aaPredicted RBP7.6□□□□□ -1.19
CSMD1-216ENST00000602557 PRICKLE4Q2TBC4 344 aa7.6□□□□□ -1.19
CSMD1-216ENST00000602557 OR4S2Q8NH73 311 aa7.6□□□□□ -1.19
CSMD1-216ENST00000602557 LY75O60449 1722 aa7.6□□□□□ -1.19
CSMD1-216ENST00000602557 TNFAIP6P98066 277 aaPredicted RBP7.6□□□□□ -1.19
CSMD1-216ENST00000602557 FRRS1LQ9P0K9 344 aa7.6□□□□□ -1.19
CSMD1-216ENST00000602557 SIRT4Q9Y6E7 314 aaPredicted RBP7.6□□□□□ -1.19
CSMD1-216ENST00000602557 EFNB1P98172 346 aa7.6□□□□□ -1.19
CSMD1-216ENST00000602557 ZNF770Q6IQ21 691 aaPredicted RBP7.6□□□□□ -1.19
CSMD1-216ENST00000602557 NRTNQ99748 197 aa7.6□□□□□ -1.19
CSMD1-216ENST00000602557 JKAMPQ9P055 326 aa7.6□□□□□ -1.19
CSMD1-216ENST00000602557 OR2T8A6NH00 312 aa7.6□□□□□ -1.19
CSMD1-216ENST00000602557 TPTE2P1Q5T6R2 138 aa7.6□□□□□ -1.19
CSMD1-216ENST00000602557 OR5R1Q8NH85 324 aa7.6□□□□□ -1.19
CSMD1-216ENST00000602557 ACP1P24666 158 aa7.6□□□□□ -1.19
CSMD1-216ENST00000602557 H1FOOQ8IZA3 346 aaPredicted RBP7.6□□□□□ -1.19
CSMD1-216ENST00000602557 TMEM167BQ9NRX6 74 aa7.6□□□□□ -1.19
CSMD1-216ENST00000602557 K7EQS6 105 aa7.6□□□□□ -1.19
CSMD1-216ENST00000602557 TMEM91Q6ZNR0 172 aa7.6□□□□□ -1.19
CSMD1-216ENST00000602557 OR8B2Q96RD0 313 aa7.6□□□□□ -1.19
CSMD1-216ENST00000602557 GTSF1LQ9H1H1 148 aa7.6□□□□□ -1.19
CSMD1-216ENST00000602557 TRAV17A0A0B4J275 112 aa7.59□□□□□ -1.19
CSMD1-216ENST00000602557 TWIST1Q15672 202 aa7.59□□□□□ -1.19
CSMD1-216ENST00000602557 DPRXA6NFQ7 191 aa7.59□□□□□ -1.19
CSMD1-216ENST00000602557 GCM2O75603 506 aaPredicted RBP7.59□□□□□ -1.19
CSMD1-216ENST00000602557 CXCL10P02778 98 aa7.59□□□□□ -1.19
CSMD1-216ENST00000602557 HSPB1P04792 205 aaKnown RBP7.59□□□□□ -1.19
CSMD1-216ENST00000602557 ZNF260Q3ZCT1 412 aa7.59□□□□□ -1.19
CSMD1-216ENST00000602557 SRSF5Q13243 272 aaKnown RBP7.59□□□□□ -1.19
CSMD1-216ENST00000602557 SPINK14Q6IE38 97 aa7.59□□□□□ -1.19
CSMD1-216ENST00000602557 LSM10Q969L4 123 aaKnown RBP7.59□□□□□ -1.19
CSMD1-216ENST00000602557 OGG1O15527 345 aa7.59□□□□□ -1.19
CSMD1-216ENST00000602557 GALNT14Q96FL9 552 aa7.59□□□□□ -1.19
CSMD1-216ENST00000602557 ANXA10Q9UJ72 324 aa7.59□□□□□ -1.19
CSMD1-216ENST00000602557 AUP1Q9Y679 476 aa7.59□□□□□ -1.19
CSMD1-216ENST00000602557 TSPAN2O60636 221 aa7.59□□□□□ -1.19
CSMD1-216ENST00000602557 LEPROTL1O95214 131 aa7.59□□□□□ -1.19
CSMD1-216ENST00000602557 SRSF3P84103 164 aaKnown RBP7.59□□□□□ -1.19
CSMD1-216ENST00000602557 CD300LDQ6UXZ3 194 aa7.59□□□□□ -1.19
CSMD1-216ENST00000602557 IL36RNQ9UBH0 155 aa7.59□□□□□ -1.19
CSMD1-216ENST00000602557 COL5A3P25940 1745 aaPredicted RBP7.59□□□□□ -1.19
CSMD1-216ENST00000602557 TMPRSS2O15393 492 aa7.59□□□□□ -1.19
CSMD1-216ENST00000602557 GAPDHP04406 335 aaKnown RBP7.59□□□□□ -1.19
CSMD1-216ENST00000602557 CT62P0C5K7 136 aa7.59□□□□□ -1.19
CSMD1-216ENST00000602557 GAB4Q2WGN9 574 aa7.59□□□□□ -1.19
CSMD1-216ENST00000602557 ANKRD55Q3KP44 614 aa7.59□□□□□ -1.19
CSMD1-216ENST00000602557 FOXC2Q99958 501 aa7.59□□□□□ -1.19
CSMD1-216ENST00000602557 STAG3L3P0CL85 134 aa7.59□□□□□ -1.19
CSMD1-216ENST00000602557 NUTF2P61970 127 aaKnown RBP7.59□□□□□ -1.19
CSMD1-216ENST00000602557 FOXC1Q12948 553 aa7.59□□□□□ -1.19
CSMD1-216ENST00000602557 KRTCAP3Q53RY4 240 aa7.59□□□□□ -1.19
CSMD1-216ENST00000602557 TMEM38BQ9NVV0 291 aa7.59□□□□□ -1.19
CSMD1-216ENST00000602557 TNXAQ16473 311 aa7.59□□□□□ -1.19
CSMD1-216ENST00000602557 RFLNBQ8N5W9 214 aa7.59□□□□□ -1.19
CSMD1-216ENST00000602557 TEX29Q8N6K0 151 aa7.59□□□□□ -1.19
CSMD1-216ENST00000602557 SCN10AQ9Y5Y9 1956 aa7.59□□□□□ -1.19
CSMD1-216ENST00000602557 CDX4O14627 284 aaPredicted RBP7.59□□□□□ -1.2
CSMD1-216ENST00000602557 CBLN3Q6UW01 205 aa7.59□□□□□ -1.2
CSMD1-216ENST00000602557 SFTPA1Q8IWL2 248 aa7.59□□□□□ -1.2
CSMD1-216ENST00000602557 CARHSP1Q9Y2V2 147 aaKnown RBP7.59□□□□□ -1.2
CSMD1-216ENST00000602557 IMMP2LQ96T52 175 aa7.58□□□□□ -1.2
CSMD1-216ENST00000602557 LAMTOR2Q9Y2Q5 125 aa7.58□□□□□ -1.2
CSMD1-216ENST00000602557 RBPMS2Q6ZRY4 209 aaKnown RBP7.58□□□□□ -1.2
CSMD1-216ENST00000602557 NAA38Q9BRA0 125 aaKnown RBP7.58□□□□□ -1.2
CSMD1-216ENST00000602557 hADV38S2A0JD32 116 aa7.58□□□□□ -1.2
CSMD1-216ENST00000602557 UBE2CO00762 179 aa7.58□□□□□ -1.2
CSMD1-216ENST00000602557 HKR1P10072 659 aa7.58□□□□□ -1.2
CSMD1-216ENST00000602557 PMELP40967 661 aa7.58□□□□□ -1.2
CSMD1-216ENST00000602557 SFTA2Q6UW10 78 aa7.58□□□□□ -1.2
CSMD1-216ENST00000602557 OR5A1Q8NGJ0 315 aa7.58□□□□□ -1.2
CSMD1-216ENST00000602557 GRAMD2BQ96HH9 432 aa7.58□□□□□ -1.2
CSMD1-216ENST00000602557 KCNMB2Q9Y691 235 aa7.58□□□□□ -1.2
CSMD1-216ENST00000602557 C9orf50Q5SZB4 431 aa7.58□□□□□ -1.2
CSMD1-216ENST00000602557 PQLC2Q6ZP29 291 aa7.58□□□□□ -1.2
CSMD1-216ENST00000602557 PPIAL4DF5H284 164 aa7.58□□□□□ -1.2
CSMD1-216ENST00000602557 OR4D11Q8NGI4 311 aa7.58□□□□□ -1.2
CSMD1-216ENST00000602557 PLA2G2FQ9BZM2 168 aa7.58□□□□□ -1.2
CSMD1-216ENST00000602557 WDR54Q9H977 334 aa7.58□□□□□ -1.2
CSMD1-216ENST00000602557 TNRC6AQ8NDV7 1962 aaKnown RBP7.58□□□□□ -1.2
CSMD1-216ENST00000602557 TRAV38-1A0A0B4J264 116 aa7.58□□□□□ -1.2
CSMD1-216ENST00000602557 FAM19A2Q8N3H0 131 aa7.58□□□□□ -1.2
CSMD1-216ENST00000602557 ASCL3Q9NQ33 180 aa7.58□□□□□ -1.2
CSMD1-216ENST00000602557 THYN1Q9P016 225 aa7.58□□□□□ -1.2
CSMD1-216ENST00000602557 Q8WTZ3 238 aa7.58□□□□□ -1.2
CSMD1-216ENST00000602557 PMCHL2Q9BQD1 86 aa7.58□□□□□ -1.2
CSMD1-216ENST00000602557 ISG15P05161 165 aa7.58□□□□□ -1.2
CSMD1-216ENST00000602557 MAFAQ8NHW3 353 aaPredicted RBP7.58□□□□□ -1.2
CSMD1-216ENST00000602557 DMRTA2Q96SC8 542 aa7.58□□□□□ -1.2
CSMD1-216ENST00000602557 NAV3Q8IVL0 2385 aa7.58□□□□□ -1.2
CSMD1-216ENST00000602557 A0A1B0GW15 77 aa7.58□□□□□ -1.2
CSMD1-216ENST00000602557 AMMECR1Q9Y4X0 333 aaPredicted RBP7.58□□□□□ -1.2
CSMD1-216ENST00000602557 R4GN57 208 aa7.58□□□□□ -1.2
CSMD1-216ENST00000602557 FCGR3AP08637 254 aa7.57□□□□□ -1.2
CSMD1-216ENST00000602557 HIKESHIQ53FT3 197 aa7.57□□□□□ -1.2
CSMD1-216ENST00000602557 C1QL3Q5VWW1 255 aa7.57□□□□□ -1.2
CSMD1-216ENST00000602557 HLA-DQA1P01909 254 aa7.57□□□□□ -1.2
CSMD1-216ENST00000602557 PIGYQ3MUY2 71 aa7.57□□□□□ -1.2
CSMD1-216ENST00000602557 GABRG3Q99928 467 aa7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 173.2 ms