RNA–Protein interactions for RNA: ENST00000579780.5

CDK5RAP3-215, Transcript of CDK5 regulatory subunit associated protein 3, human

TSL 3

Gene CDK5RAP3, Length 611 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK5RAP3-215	ENST00000579780		A0A0B4J293	547 aa		13.59	□□□□□ -0.23
CDK5RAP3-215	ENST00000579780	C7orf66	A4D0T2	115 aa		13.59	□□□□□ -0.23
CDK5RAP3-215	ENST00000579780	TXNL1	O43396	289 aa		13.59	□□□□□ -0.23
CDK5RAP3-215	ENST00000579780	B3GALNT1	O75752	331 aa		13.59	□□□□□ -0.23
CDK5RAP3-215	ENST00000579780	OR4E1	P0C645	316 aa		13.59	□□□□□ -0.23
CDK5RAP3-215	ENST00000579780	VSIG10L2	P0DP72	767 aa		13.59	□□□□□ -0.23
CDK5RAP3-215	ENST00000579780	RAB25	P57735	213 aa		13.59	□□□□□ -0.23
CDK5RAP3-215	ENST00000579780	PRB3	Q04118	309 aa	Predicted RBP	13.59	□□□□□ -0.23
CDK5RAP3-215	ENST00000579780	CATR1	Q13166	79 aa		13.59	□□□□□ -0.23
CDK5RAP3-215	ENST00000579780	PPP1R1A	Q13522	171 aa		13.59	□□□□□ -0.23
CDK5RAP3-215	ENST00000579780	TATDN3	Q17R31	274 aa		13.59	□□□□□ -0.23
CDK5RAP3-215	ENST00000579780	RPL39P5	Q59GN2	51 aa		13.59	□□□□□ -0.23
CDK5RAP3-215	ENST00000579780	MINOS1	Q5TGZ0	78 aa		13.59	□□□□□ -0.23
CDK5RAP3-215	ENST00000579780	GLDN	Q6ZMI3	551 aa	Predicted RBP	13.59	□□□□□ -0.23
CDK5RAP3-215	ENST00000579780	KCTD9	Q7L273	389 aa		13.59	□□□□□ -0.23
CDK5RAP3-215	ENST00000579780	SGPP2	Q8IWX5	399 aa		13.59	□□□□□ -0.23
CDK5RAP3-215	ENST00000579780	LHX4	Q969G2	390 aa		13.59	□□□□□ -0.23
CDK5RAP3-215	ENST00000579780	ST6GALNAC6	Q969X2	333 aa		13.59	□□□□□ -0.23
CDK5RAP3-215	ENST00000579780	GALNT14	Q96FL9	552 aa		13.59	□□□□□ -0.23
CDK5RAP3-215	ENST00000579780	LIN7C	Q9NUP9	197 aa	Known RBP	13.59	□□□□□ -0.23
CDK5RAP3-215	ENST00000579780	TBL2	Q9Y4P3	447 aa	Known RBP	13.59	□□□□□ -0.23
CDK5RAP3-215	ENST00000579780	MINOS1-NBL1	R4GNA1	71 aa		13.59	□□□□□ -0.23
CDK5RAP3-215	ENST00000579780	MAP1A	P78559	2803 aa	Predicted RBP	13.59	□□□□□ -0.23
CDK5RAP3-215	ENST00000579780	BUB1B-PAK6	H3BSN5	160 aa		13.58	□□□□□ -0.24
CDK5RAP3-215	ENST00000579780		M0R1X1	148 aa		13.58	□□□□□ -0.24
CDK5RAP3-215	ENST00000579780	SMAD7	O15105	426 aa	Known RBP	13.58	□□□□□ -0.24
CDK5RAP3-215	ENST00000579780	MPPED1	O15442	326 aa		13.58	□□□□□ -0.24
CDK5RAP3-215	ENST00000579780	PGLYRP1	O75594	196 aa	Predicted RBP	13.58	□□□□□ -0.24
CDK5RAP3-215	ENST00000579780	AKR1C4	P17516	323 aa		13.58	□□□□□ -0.24
CDK5RAP3-215	ENST00000579780	HTR1D	P28221	377 aa		13.58	□□□□□ -0.24
CDK5RAP3-215	ENST00000579780	DHRS2	Q13268	280 aa		13.58	□□□□□ -0.24
CDK5RAP3-215	ENST00000579780	C4orf46	Q504U0	113 aa		13.58	□□□□□ -0.24
CDK5RAP3-215	ENST00000579780	LYG2	Q86SG7	212 aa		13.58	□□□□□ -0.24
CDK5RAP3-215	ENST00000579780	TBC1D26	Q86UD7	250 aa		13.58	□□□□□ -0.24
CDK5RAP3-215	ENST00000579780	CAPSL	Q8WWF8	208 aa		13.58	□□□□□ -0.24
CDK5RAP3-215	ENST00000579780	ADTRP	Q96IZ2	230 aa		13.58	□□□□□ -0.24
CDK5RAP3-215	ENST00000579780	BEX2	Q9BXY8	128 aa		13.58	□□□□□ -0.24
CDK5RAP3-215	ENST00000579780	BEX1	Q9HBH7	125 aa		13.58	□□□□□ -0.24
CDK5RAP3-215	ENST00000579780	GPN1	Q9HCN4	374 aa	Predicted RBP	13.58	□□□□□ -0.24
CDK5RAP3-215	ENST00000579780	TEX13D	A0A0J9YY54	714 aa	Predicted RBP	13.57	□□□□□ -0.24
CDK5RAP3-215	ENST00000579780	LEUTX	A8MZ59	168 aa		13.57	□□□□□ -0.24
CDK5RAP3-215	ENST00000579780		H0Y980	276 aa		13.57	□□□□□ -0.24
CDK5RAP3-215	ENST00000579780	TNFSF12	O43508	249 aa		13.57	□□□□□ -0.24
CDK5RAP3-215	ENST00000579780	CD5L	O43866	347 aa		13.57	□□□□□ -0.24
CDK5RAP3-215	ENST00000579780	PROP1	O75360	226 aa		13.57	□□□□□ -0.24
CDK5RAP3-215	ENST00000579780	HLA-A	P01891	365 aa	Known RBP	13.57	□□□□□ -0.24
CDK5RAP3-215	ENST00000579780	DUT	P33316	252 aa	Known RBP	13.57	□□□□□ -0.24
CDK5RAP3-215	ENST00000579780	CEACAM3	P40198	252 aa		13.57	□□□□□ -0.24
CDK5RAP3-215	ENST00000579780	THBS3	P49746	956 aa		13.57	□□□□□ -0.24
CDK5RAP3-215	ENST00000579780	SUPT4H1	P63272	117 aa	Known RBP	13.57	□□□□□ -0.24
CDK5RAP3-215	ENST00000579780	ZNF816	Q0VGE8	651 aa	Predicted RBP	13.57	□□□□□ -0.24
CDK5RAP3-215	ENST00000579780	MIDN	Q504T8	468 aa		13.57	□□□□□ -0.24
CDK5RAP3-215	ENST00000579780	GPR157	Q5UAW9	335 aa		13.57	□□□□□ -0.24
CDK5RAP3-215	ENST00000579780	SPNS3	Q6ZMD2	512 aa		13.57	□□□□□ -0.24
CDK5RAP3-215	ENST00000579780	TCTEX1D1	Q8N7M0	179 aa		13.57	□□□□□ -0.24
CDK5RAP3-215	ENST00000579780	FAM212B	Q9NTI7	297 aa	Predicted RBP	13.57	□□□□□ -0.24
CDK5RAP3-215	ENST00000579780	ABCA1	O95477	2261 aa		13.57	□□□□□ -0.24
CDK5RAP3-215	ENST00000579780	IGHV1-69D	A0A0B4J2H0	117 aa		13.56	□□□□□ -0.24
CDK5RAP3-215	ENST00000579780	CENPVL3	A0A0U1RRI6	287 aa		13.56	□□□□□ -0.24
CDK5RAP3-215	ENST00000579780	SNRPGP15	A8MWD9	76 aa		13.56	□□□□□ -0.24
CDK5RAP3-215	ENST00000579780	OOSP1	A8MZH6	123 aa		13.56	□□□□□ -0.24
CDK5RAP3-215	ENST00000579780	LY6L	H3BQJ8	138 aa		13.56	□□□□□ -0.24
CDK5RAP3-215	ENST00000579780	NPFF	O15130	113 aa		13.56	□□□□□ -0.24
CDK5RAP3-215	ENST00000579780	SFT2D2	O95562	160 aa		13.56	□□□□□ -0.24
CDK5RAP3-215	ENST00000579780	IGHV1-69	P01742	117 aa		13.56	□□□□□ -0.24
CDK5RAP3-215	ENST00000579780	ANXA3	P12429	323 aa		13.56	□□□□□ -0.24
CDK5RAP3-215	ENST00000579780	VAMP1	P23763	118 aa		13.56	□□□□□ -0.24
CDK5RAP3-215	ENST00000579780	F2R	P25116	425 aa		13.56	□□□□□ -0.24
CDK5RAP3-215	ENST00000579780	KRTAP1-1	Q07627	177 aa		13.56	□□□□□ -0.24
CDK5RAP3-215	ENST00000579780	C1orf229	Q6ZS94	237 aa	Predicted RBP	13.56	□□□□□ -0.24
CDK5RAP3-215	ENST00000579780	TGIF2LX	Q8IUE1	241 aa		13.56	□□□□□ -0.24
CDK5RAP3-215	ENST00000579780	OR51H1	Q8NH63	302 aa		13.56	□□□□□ -0.24
CDK5RAP3-215	ENST00000579780	ZNF431	Q8TF32	576 aa	Predicted RBP	13.56	□□□□□ -0.24
CDK5RAP3-215	ENST00000579780	RPE	Q96AT9	228 aa		13.56	□□□□□ -0.24
CDK5RAP3-215	ENST00000579780	SEC22C	Q9BRL7	303 aa		13.56	□□□□□ -0.24
CDK5RAP3-215	ENST00000579780	DPM3	Q9P2X0	92 aa		13.56	□□□□□ -0.24
CDK5RAP3-215	ENST00000579780	ALG5	Q9Y673	324 aa		13.56	□□□□□ -0.24
CDK5RAP3-215	ENST00000579780	OTOG	Q6ZRI0	2925 aa		13.55	□□□□□ -0.24
CDK5RAP3-215	ENST00000579780	C3orf85	A0A1B0GTC6	90 aa		13.55	□□□□□ -0.24
CDK5RAP3-215	ENST00000579780	C9orf170	A2RU37	121 aa		13.55	□□□□□ -0.24
CDK5RAP3-215	ENST00000579780	CREBL2	O60519	120 aa	Predicted RBP	13.55	□□□□□ -0.24
CDK5RAP3-215	ENST00000579780	FSHB	P01225	129 aa		13.55	□□□□□ -0.24
CDK5RAP3-215	ENST00000579780	IFNA2	P01563	188 aa		13.55	□□□□□ -0.24
CDK5RAP3-215	ENST00000579780	OR5AC1	P0C628	307 aa		13.55	□□□□□ -0.24
CDK5RAP3-215	ENST00000579780	KIR2DS2	P43631	304 aa		13.55	□□□□□ -0.24
CDK5RAP3-215	ENST00000579780	LGALS4	P56470	323 aa		13.55	□□□□□ -0.24
CDK5RAP3-215	ENST00000579780	TPTE2P1	Q5T6R2	138 aa		13.55	□□□□□ -0.24
CDK5RAP3-215	ENST00000579780	PDZD9	Q8IXQ8	264 aa		13.55	□□□□□ -0.24
CDK5RAP3-215	ENST00000579780	OR8H3	Q8N146	312 aa		13.55	□□□□□ -0.24
CDK5RAP3-215	ENST00000579780	TEX29	Q8N6K0	151 aa		13.55	□□□□□ -0.24
CDK5RAP3-215	ENST00000579780	TCTEX1D2	Q8WW35	142 aa		13.55	□□□□□ -0.24
CDK5RAP3-215	ENST00000579780	DDB2	Q92466	427 aa		13.55	□□□□□ -0.24
CDK5RAP3-215	ENST00000579780	C18orf12	Q96KH6	178 aa		13.55	□□□□□ -0.24
CDK5RAP3-215	ENST00000579780	MRPL20	Q9BYC9	149 aa	Known RBP	13.55	□□□□□ -0.24
CDK5RAP3-215	ENST00000579780	KCNIP3	Q9Y2W7	256 aa		13.55	□□□□□ -0.24
CDK5RAP3-215	ENST00000579780	ZAN	Q9Y493	2812 aa		13.54	□□□□□ -0.24
CDK5RAP3-215	ENST00000579780		A0A0B4J2A0	478 aa		13.54	□□□□□ -0.24
CDK5RAP3-215	ENST00000579780	LINC00473	A8K010	186 aa		13.54	□□□□□ -0.24
CDK5RAP3-215	ENST00000579780	RBFOX2	O43251	390 aa	Known RBP eCLIP	13.54	□□□□□ -0.24
CDK5RAP3-215	ENST00000579780	DUS4L	O95620	317 aa	Known RBP	13.54	□□□□□ -0.24

Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms