RNA–Protein interactions for RNA: ENST00000573600.5

CTDNEP1-208, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CTDNEP1, Length 1,724 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-208ENST00000573600 DUTP33316 252 aaKnown RBP23.99■■□□□ 1.43
CTDNEP1-208ENST00000573600 P2RY1P47900 373 aa23.99■■□□□ 1.43
CTDNEP1-208ENST00000573600 ID3Q02535 119 aa23.99■■□□□ 1.43
CTDNEP1-208ENST00000573600 CT45A1Q5HYN5 189 aa23.99■■□□□ 1.43
CTDNEP1-208ENST00000573600 ZNF439Q8NDP4 499 aa23.99■■□□□ 1.43
CTDNEP1-208ENST00000573600 CT45A3Q8NHU0 189 aa23.99■■□□□ 1.43
CTDNEP1-208ENST00000573600 ST8SIA2Q92186 375 aa23.99■■□□□ 1.43
CTDNEP1-208ENST00000573600 LAMP3Q9UQV4 416 aa23.99■■□□□ 1.43
CTDNEP1-208ENST00000573600 CACNA1BQ00975 2339 aa23.99■■□□□ 1.43
CTDNEP1-208ENST00000573600 A0A0G2JRQ6 117 aa23.98■■□□□ 1.43
CTDNEP1-208ENST00000573600 A0A1W2PPR1 153 aa23.98■■□□□ 1.43
CTDNEP1-208ENST00000573600 A6NNC1 897 aa23.98■■□□□ 1.43
CTDNEP1-208ENST00000573600 PITX3O75364 302 aa23.98■■□□□ 1.43
CTDNEP1-208ENST00000573600 SPDEFO95238 335 aa23.98■■□□□ 1.43
CTDNEP1-208ENST00000573600 PVALBP20472 110 aaPredicted RBP23.98■■□□□ 1.43
CTDNEP1-208ENST00000573600 PRAMEF5Q5TYX0 476 aa23.98■■□□□ 1.43
CTDNEP1-208ENST00000573600 HEPN1Q6WQI6 88 aa23.98■■□□□ 1.43
CTDNEP1-208ENST00000573600 SLC7A5P1Q8MH63 180 aa23.98■■□□□ 1.43
CTDNEP1-208ENST00000573600 RAB39BQ96DA2 213 aa23.98■■□□□ 1.43
CTDNEP1-208ENST00000573600 ZC4H2Q9NQZ6 224 aa23.98■■□□□ 1.43
CTDNEP1-208ENST00000573600 ABCA4P78363 2273 aa23.98■■□□□ 1.43
CTDNEP1-208ENST00000573600 TRBV23-1A0A0A0MS06 115 aa23.98■■□□□ 1.43
CTDNEP1-208ENST00000573600 IGKV1-5P01602 117 aa23.98■■□□□ 1.43
CTDNEP1-208ENST00000573600 SCARB1Q8WTV0 552 aa23.98■■□□□ 1.43
CTDNEP1-208ENST00000573600 TIMD4Q96H15 378 aa23.98■■□□□ 1.43
CTDNEP1-208ENST00000573600 SPTBN1Q01082 2364 aaKnown RBP23.97■■□□□ 1.43
CTDNEP1-208ENST00000573600 LINC00473A8K010 186 aa23.97■■□□□ 1.43
CTDNEP1-208ENST00000573600 C17orf98A8MV24 154 aa23.97■■□□□ 1.43
CTDNEP1-208ENST00000573600 TAAR5O14804 337 aa23.97■■□□□ 1.43
CTDNEP1-208ENST00000573600 RAB29O14966 203 aa23.97■■□□□ 1.43
CTDNEP1-208ENST00000573600 GPR37O15354 613 aa23.97■■□□□ 1.43
CTDNEP1-208ENST00000573600 SLC31A2O15432 143 aa23.97■■□□□ 1.43
CTDNEP1-208ENST00000573600 RAMP3O60896 148 aa23.97■■□□□ 1.43
CTDNEP1-208ENST00000573600 EPHA1P21709 976 aa23.97■■□□□ 1.43
CTDNEP1-208ENST00000573600 GPR157Q5UAW9 335 aa23.97■■□□□ 1.43
CTDNEP1-208ENST00000573600 DMBX1Q8NFW5 382 aa23.97■■□□□ 1.43
CTDNEP1-208ENST00000573600 RAB1CQ92928 201 aa23.97■■□□□ 1.43
CTDNEP1-208ENST00000573600 MMP24Q9Y5R2 645 aa23.97■■□□□ 1.43
CTDNEP1-208ENST00000573600 USP24Q9UPU5 2620 aa23.97■■□□□ 1.43
CTDNEP1-208ENST00000573600 PROP1O75360 226 aa23.96■■□□□ 1.43
CTDNEP1-208ENST00000573600 MMP23AO75900 390 aa23.96■■□□□ 1.43
CTDNEP1-208ENST00000573600 IGHV3-7P01780 117 aa23.96■■□□□ 1.43
CTDNEP1-208ENST00000573600 MMP9P14780 707 aa23.96■■□□□ 1.43
CTDNEP1-208ENST00000573600 RAB14P61106 215 aa23.96■■□□□ 1.43
CTDNEP1-208ENST00000573600 LEAP2Q969E1 77 aa23.96■■□□□ 1.43
CTDNEP1-208ENST00000573600 BBC3Q96PG8 261 aaPredicted RBP23.96■■□□□ 1.43
CTDNEP1-208ENST00000573600 UBTD1Q9HAC8 227 aa23.96■■□□□ 1.43
CTDNEP1-208ENST00000573600 KALRNO60229 2985 aa23.96■■□□□ 1.43
CTDNEP1-208ENST00000573600 M0R1X1 148 aa23.96■■□□□ 1.43
CTDNEP1-208ENST00000573600 BRWD1-AS2P59051 145 aa23.96■■□□□ 1.43
CTDNEP1-208ENST00000573600 ZNF816Q0VGE8 651 aaPredicted RBP23.96■■□□□ 1.43
CTDNEP1-208ENST00000573600 OR2B11Q5JQS5 317 aa23.96■■□□□ 1.43
CTDNEP1-208ENST00000573600 CXorf66Q5JRM2 361 aaPredicted RBP23.96■■□□□ 1.43
CTDNEP1-208ENST00000573600 GSX2Q9BZM3 304 aa23.96■■□□□ 1.43
CTDNEP1-208ENST00000573600 RALYQ9UKM9 306 aaKnown RBP23.96■■□□□ 1.43
CTDNEP1-208ENST00000573600 IGSF10Q6WRI0 2623 aa23.95■■□□□ 1.43
CTDNEP1-208ENST00000573600 GPR137BO60478 399 aa23.95■■□□□ 1.42
CTDNEP1-208ENST00000573600 CCL3L1P16619 93 aa23.95■■□□□ 1.42
CTDNEP1-208ENST00000573600 CLLU1Q5K131 121 aa23.95■■□□□ 1.42
CTDNEP1-208ENST00000573600 SLC25A48Q6ZT89 311 aaKnown RBP23.95■■□□□ 1.42
CTDNEP1-208ENST00000573600 STOML3Q8TAV4 291 aa23.95■■□□□ 1.42
CTDNEP1-208ENST00000573600 PHYHIPLQ96FC7 376 aa23.95■■□□□ 1.42
CTDNEP1-208ENST00000573600 C11orf1Q9H5F2 150 aa23.95■■□□□ 1.42
CTDNEP1-208ENST00000573600 COA4Q9NYJ1 87 aa23.95■■□□□ 1.42
CTDNEP1-208ENST00000573600 CACNG5Q9UF02 275 aa23.95■■□□□ 1.42
CTDNEP1-208ENST00000573600 MIOXQ9UGB7 285 aa23.95■■□□□ 1.42
CTDNEP1-208ENST00000573600 YLPM1P49750 1951 aaKnown RBP23.94■■□□□ 1.42
CTDNEP1-208ENST00000573600 KIR2DS2P43631 304 aa23.94■■□□□ 1.42
CTDNEP1-208ENST00000573600 POLR2GP62487 172 aaKnown RBP eCLIP23.94■■□□□ 1.42
CTDNEP1-208ENST00000573600 TMEM155Q4W5P6 130 aa23.94■■□□□ 1.42
CTDNEP1-208ENST00000573600 RPL39P5Q59GN2 51 aa23.94■■□□□ 1.42
CTDNEP1-208ENST00000573600 UTF1Q5T230 341 aa23.94■■□□□ 1.42
CTDNEP1-208ENST00000573600 PRELID3BQ9Y3B1 194 aa23.94■■□□□ 1.42
CTDNEP1-208ENST00000573600 WRBO00258 174 aa23.93■■□□□ 1.42
CTDNEP1-208ENST00000573600 PRB1P04280 392 aa23.93■■□□□ 1.42
CTDNEP1-208ENST00000573600 NCR3LG1Q68D85 454 aa23.93■■□□□ 1.42
CTDNEP1-208ENST00000573600 ALKAL2Q6UX46 152 aa23.93■■□□□ 1.42
CTDNEP1-208ENST00000573600 CYTL1Q9NRR1 136 aa23.93■■□□□ 1.42
CTDNEP1-208ENST00000573600 A0A1W2PPE3 182 aa23.93■■□□□ 1.42
CTDNEP1-208ENST00000573600 RBFOX2O43251 390 aaKnown RBP eCLIP23.93■■□□□ 1.42
CTDNEP1-208ENST00000573600 S1PR2O95136 353 aa23.93■■□□□ 1.42
CTDNEP1-208ENST00000573600 TPT1P13693 172 aaKnown RBP23.93■■□□□ 1.42
CTDNEP1-208ENST00000573600 GNG10P50151 68 aa23.93■■□□□ 1.42
CTDNEP1-208ENST00000573600 VAMP2P63027 116 aa23.93■■□□□ 1.42
CTDNEP1-208ENST00000573600 AVPI1Q5T686 147 aa23.93■■□□□ 1.42
CTDNEP1-208ENST00000573600 ZNF841Q6ZN19 808 aa23.93■■□□□ 1.42
CTDNEP1-208ENST00000573600 Q6ZRM9 215 aa23.93■■□□□ 1.42
CTDNEP1-208ENST00000573600 LYG1Q8N1E2 194 aa23.93■■□□□ 1.42
CTDNEP1-208ENST00000573600 CHODLQ9H9P2 273 aa23.93■■□□□ 1.42
CTDNEP1-208ENST00000573600 SAA2-SAA4A0A096LPE2 208 aa23.92■■□□□ 1.42
CTDNEP1-208ENST00000573600 SAA2P0DJI9 122 aaPredicted RBP23.92■■□□□ 1.42
CTDNEP1-208ENST00000573600 ODF3L1Q8IXM7 274 aa23.92■■□□□ 1.42
CTDNEP1-208ENST00000573600 OR8B3Q8NGG8 313 aa23.92■■□□□ 1.42
CTDNEP1-208ENST00000573600 ADTRPQ96IZ2 230 aa23.92■■□□□ 1.42
CTDNEP1-208ENST00000573600 OR8B2Q96RD0 313 aa23.92■■□□□ 1.42
CTDNEP1-208ENST00000573600 ARID1AO14497 2285 aa23.92■■□□□ 1.42
CTDNEP1-208ENST00000573600 USF3Q68DE3 2245 aa23.91■■□□□ 1.42
CTDNEP1-208ENST00000573600 PPIHO43447 177 aaKnown RBP23.91■■□□□ 1.42
CTDNEP1-208ENST00000573600 SSSCA1O60232 199 aa23.91■■□□□ 1.42
CTDNEP1-208ENST00000573600 HPRT1P00492 218 aa23.91■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 109.9 ms