RNA–Protein interactions for RNA: ENST00000566082.1

USB1-212, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2

Gene USB1, Length 3,888 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-212ENST00000566082 SMRP1Q8NCR6 262 aa9□□□□□ -0.97
USB1-212ENST00000566082 MISP3Q96FF7 219 aa9□□□□□ -0.97
USB1-212ENST00000566082 ZNF552Q9H707 407 aaPredicted RBP9□□□□□ -0.97
USB1-212ENST00000566082 DOCK11Q5JSL3 2073 aa9□□□□□ -0.97
USB1-212ENST00000566082 CBY3A6NI87 242 aa9□□□□□ -0.97
USB1-212ENST00000566082 TCF21O43680 179 aa9□□□□□ -0.97
USB1-212ENST00000566082 IGHV2-5P01817 119 aa9□□□□□ -0.97
USB1-212ENST00000566082 TAS2R45P59539 299 aa9□□□□□ -0.97
USB1-212ENST00000566082 RHOBP62745 196 aa9□□□□□ -0.97
USB1-212ENST00000566082 HLA-DRB5Q30154 266 aa9□□□□□ -0.97
USB1-212ENST00000566082 OR52L2PQ8NGH6 319 aa9□□□□□ -0.97
USB1-212ENST00000566082 TMEM56Q96MV1 263 aa9□□□□□ -0.97
USB1-212ENST00000566082 FAM173AQ9BQD7 235 aa9□□□□□ -0.97
USB1-212ENST00000566082 PNRC2Q9NPJ4 139 aaKnown RBP9□□□□□ -0.97
USB1-212ENST00000566082 TMEM56-RWDD3S4R434 201 aa9□□□□□ -0.97
USB1-212ENST00000566082 LRRK1Q38SD2 2015 aa9□□□□□ -0.97
USB1-212ENST00000566082 M0QZK8 103 aa9□□□□□ -0.97
USB1-212ENST00000566082 DNPH1O43598 174 aa9□□□□□ -0.97
USB1-212ENST00000566082 GGCTO75223 188 aaKnown RBP9□□□□□ -0.97
USB1-212ENST00000566082 CEBPDP49716 269 aaPredicted RBP9□□□□□ -0.97
USB1-212ENST00000566082 CAMPP49913 170 aa9□□□□□ -0.97
USB1-212ENST00000566082 TNFRSF9Q07011 255 aa9□□□□□ -0.97
USB1-212ENST00000566082 MZT1Q08AG7 82 aa9□□□□□ -0.97
USB1-212ENST00000566082 OR1C1Q15619 314 aa9□□□□□ -0.97
USB1-212ENST00000566082 RPEL1Q2QD12 228 aa9□□□□□ -0.97
USB1-212ENST00000566082 SMIM21Q3B7S5 101 aa9□□□□□ -0.97
USB1-212ENST00000566082 NDUFAF3Q9BU61 184 aa9□□□□□ -0.97
USB1-212ENST00000566082 CHRNA10Q9GZZ6 450 aa9□□□□□ -0.97
USB1-212ENST00000566082 SEBOXQ9HB31 216 aaPredicted RBP9□□□□□ -0.97
USB1-212ENST00000566082 LOXL2Q9Y4K0 774 aa9□□□□□ -0.97
USB1-212ENST00000566082 CNOT1A5YKK6 2376 aaKnown RBP8.99□□□□□ -0.97
USB1-212ENST00000566082 HAND1O96004 215 aa8.99□□□□□ -0.97
USB1-212ENST00000566082 CD1BP29016 333 aa8.99□□□□□ -0.97
USB1-212ENST00000566082 CFHR1Q03591 330 aa8.99□□□□□ -0.97
USB1-212ENST00000566082 JOSD1Q15040 202 aaPredicted RBP8.99□□□□□ -0.97
USB1-212ENST00000566082 RNASEKQ6P5S7 137 aaKnown RBP8.99□□□□□ -0.97
USB1-212ENST00000566082 CORO2AQ92828 525 aa8.99□□□□□ -0.97
USB1-212ENST00000566082 HSD17B10Q99714 261 aaKnown RBP8.99□□□□□ -0.97
USB1-212ENST00000566082 PSMG3Q9BT73 122 aaPredicted RBP8.99□□□□□ -0.97
USB1-212ENST00000566082 LIME1Q9H400 295 aa8.99□□□□□ -0.97
USB1-212ENST00000566082 UBE2ZQ9H832 354 aaPredicted RBP8.99□□□□□ -0.97
USB1-212ENST00000566082 A0A1W2PQM1 296 aa8.99□□□□□ -0.97
USB1-212ENST00000566082 TMEM250H0YL14 139 aa8.99□□□□□ -0.97
USB1-212ENST00000566082 AMBPP02760 352 aa8.99□□□□□ -0.97
USB1-212ENST00000566082 OR10J4P0C629 311 aa8.99□□□□□ -0.97
USB1-212ENST00000566082 SRP14P37108 136 aaKnown RBP8.99□□□□□ -0.97
USB1-212ENST00000566082 RPL23P62829 140 aaKnown RBP8.99□□□□□ -0.97
USB1-212ENST00000566082 HERPUD1Q15011 391 aa8.99□□□□□ -0.97
USB1-212ENST00000566082 PSG5Q15238 335 aa8.99□□□□□ -0.97
USB1-212ENST00000566082 KIAA1644Q3SXP7 199 aa8.99□□□□□ -0.97
USB1-212ENST00000566082 OR1L1Q8NH94 360 aa8.99□□□□□ -0.97
USB1-212ENST00000566082 OR2J1Q9GZK6 312 aa8.99□□□□□ -0.97
USB1-212ENST00000566082 DIRC3C9JPN6 131 aa8.99□□□□□ -0.97
USB1-212ENST00000566082 OR2H2O95918 312 aa8.99□□□□□ -0.97
USB1-212ENST00000566082 FGF5P12034 268 aa8.99□□□□□ -0.97
USB1-212ENST00000566082 MAGEA5P43359 124 aa8.99□□□□□ -0.97
USB1-212ENST00000566082 HGFACQ04756 655 aa8.99□□□□□ -0.97
USB1-212ENST00000566082 ZNF525Q8N782 197 aa8.99□□□□□ -0.97
USB1-212ENST00000566082 SLC24A4Q8NFF2 622 aa8.99□□□□□ -0.97
USB1-212ENST00000566082 IER2Q9BTL4 223 aa8.99□□□□□ -0.97
USB1-212ENST00000566082 CACNA1GO43497 2377 aa8.98□□□□□ -0.97
USB1-212ENST00000566082 FAM90A10PA6NDY2 464 aa8.98□□□□□ -0.97
USB1-212ENST00000566082 FAM90A18PA6NE21 464 aa8.98□□□□□ -0.97
USB1-212ENST00000566082 FAM90A16PA6NEW6 464 aa8.98□□□□□ -0.97
USB1-212ENST00000566082 FAM90A20PA6NIJ5 464 aa8.98□□□□□ -0.97
USB1-212ENST00000566082 FAM90A8PA6NJQ4 464 aa8.98□□□□□ -0.97
USB1-212ENST00000566082 FAM90A7PA6NKC0 464 aa8.98□□□□□ -0.97
USB1-212ENST00000566082 FAM90A22PA8MWA6 464 aa8.98□□□□□ -0.97
USB1-212ENST00000566082 FAM90A12PA8MX19 464 aa8.98□□□□□ -0.97
USB1-212ENST00000566082 FAM90A5PA8MXJ8 464 aa8.98□□□□□ -0.97
USB1-212ENST00000566082 FAM90A23PA8MXZ1 464 aa8.98□□□□□ -0.97
USB1-212ENST00000566082 ENSAO43768 121 aaKnown RBP8.98□□□□□ -0.97
USB1-212ENST00000566082 FAM90A15PP0C7V4 464 aa8.98□□□□□ -0.97
USB1-212ENST00000566082 FAM90A13PP0C7W8 464 aa8.98□□□□□ -0.97
USB1-212ENST00000566082 FAM90A14PP0C7W9 464 aa8.98□□□□□ -0.97
USB1-212ENST00000566082 FAM90A24PP0C7X0 464 aa8.98□□□□□ -0.97
USB1-212ENST00000566082 CBLN1P23435 193 aa8.98□□□□□ -0.97
USB1-212ENST00000566082 CTSSP25774 331 aa8.98□□□□□ -0.97
USB1-212ENST00000566082 LRRC75BQ2VPJ9 315 aa8.98□□□□□ -0.97
USB1-212ENST00000566082 CDPF1Q6NVV7 123 aa8.98□□□□□ -0.97
USB1-212ENST00000566082 SLC23A3Q6PIS1 610 aa8.98□□□□□ -0.97
USB1-212ENST00000566082 SPSB3Q6PJ21 355 aa8.98□□□□□ -0.97
USB1-212ENST00000566082 DRAM1Q8N682 238 aa8.98□□□□□ -0.97
USB1-212ENST00000566082 OR4C5Q8NGB2 326 aa8.98□□□□□ -0.97
USB1-212ENST00000566082 OR51G1Q8NGK1 321 aa8.98□□□□□ -0.97
USB1-212ENST00000566082 SLC35E1Q96K37 410 aa8.98□□□□□ -0.97
USB1-212ENST00000566082 PLSCR2Q9NRY7 297 aa8.98□□□□□ -0.97
USB1-212ENST00000566082 ZNF407Q9C0G0 2248 aa8.98□□□□□ -0.97
USB1-212ENST00000566082 ZNF106Q9H2Y7 1883 aaKnown RBP8.98□□□□□ -0.97
USB1-212ENST00000566082 CD55P08174 381 aa8.98□□□□□ -0.97
USB1-212ENST00000566082 TCTEX1D1Q8N7M0 179 aa8.98□□□□□ -0.97
USB1-212ENST00000566082 FAM131CQ96AQ9 280 aa8.98□□□□□ -0.97
USB1-212ENST00000566082 TRIB1Q96RU8 372 aa8.98□□□□□ -0.97
USB1-212ENST00000566082 ZIC3O60481 467 aa8.98□□□□□ -0.97
USB1-212ENST00000566082 S1PR2O95136 353 aa8.98□□□□□ -0.97
USB1-212ENST00000566082 RFPL3SP0C7P2 107 aa8.98□□□□□ -0.97
USB1-212ENST00000566082 DEFA4P12838 97 aa8.98□□□□□ -0.97
USB1-212ENST00000566082 SELEP16581 610 aa8.98□□□□□ -0.97
USB1-212ENST00000566082 PCOLCEQ15113 449 aa8.98□□□□□ -0.97
USB1-212ENST00000566082 LYG1Q8N1E2 194 aa8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms