RNA–Protein interactions for RNA: ENST00000512431.5

DDX41-215, Transcript of DEAD-box helicase 41, humanhuman

TSL 5

Gene DDX41, Length 904 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-215ENST00000512431 ATF4P18848 351 aaPredicted RBP9.43□□□□□ -0.9
DDX41-215ENST00000512431 KIR2DS2P43631 304 aa9.43□□□□□ -0.9
DDX41-215ENST00000512431 DEFA5Q01523 94 aa9.43□□□□□ -0.9
DDX41-215ENST00000512431 RIPK1Q13546 671 aa9.43□□□□□ -0.9
DDX41-215ENST00000512431 ATP6AP1Q15904 470 aa9.43□□□□□ -0.9
DDX41-215ENST00000512431 C5orf24Q7Z6I8 188 aa9.43□□□□□ -0.9
DDX41-215ENST00000512431 WFDC3Q8IUB2 231 aa9.43□□□□□ -0.9
DDX41-215ENST00000512431 PHLDA1Q8WV24 401 aaPredicted RBP9.43□□□□□ -0.9
DDX41-215ENST00000512431 SELENOIQ9C0D9 397 aa9.43□□□□□ -0.9
DDX41-215ENST00000512431 PARP12Q9H0J9 701 aaKnown RBP9.43□□□□□ -0.9
DDX41-215ENST00000512431 TP53TG1Q9Y2A0 90 aa9.43□□□□□ -0.9
DDX41-215ENST00000512431 KMT2AQ03164 3969 aa9.42□□□□□ -0.9
DDX41-215ENST00000512431 SPRY2O43597 315 aa9.42□□□□□ -0.9
DDX41-215ENST00000512431 FOLR2P14207 255 aa9.42□□□□□ -0.9
DDX41-215ENST00000512431 FASP25445 335 aa9.42□□□□□ -0.9
DDX41-215ENST00000512431 EWSR1Q01844 656 aaKnown RBP eCLIP9.42□□□□□ -0.9
DDX41-215ENST00000512431 ANKRD55Q3KP44 614 aa9.42□□□□□ -0.9
DDX41-215ENST00000512431 SLC25A30Q5SVS4 291 aa9.42□□□□□ -0.9
DDX41-215ENST00000512431 GLIPR1L1Q6UWM5 242 aa9.42□□□□□ -0.9
DDX41-215ENST00000512431 OR52B4Q8NGK2 314 aa9.42□□□□□ -0.9
DDX41-215ENST00000512431 MRPL30Q8TCC3 161 aaKnown RBP9.42□□□□□ -0.9
DDX41-215ENST00000512431 LGALS12Q96DT0 336 aa9.42□□□□□ -0.9
DDX41-215ENST00000512431 WDR89Q96FK6 387 aaPredicted RBP9.42□□□□□ -0.9
DDX41-215ENST00000512431 ABHD14BQ96IU4 210 aa9.42□□□□□ -0.9
DDX41-215ENST00000512431 PHB2Q99623 299 aa9.42□□□□□ -0.9
DDX41-215ENST00000512431 BANF2Q9H503 90 aa9.42□□□□□ -0.9
DDX41-215ENST00000512431 ZC4H2Q9NQZ6 224 aa9.42□□□□□ -0.9
DDX41-215ENST00000512431 CKLFQ9UBR5 152 aa9.42□□□□□ -0.9
DDX41-215ENST00000512431 POMPQ9Y244 141 aa9.42□□□□□ -0.9
DDX41-215ENST00000512431 H3BNX3 289 aa9.41□□□□□ -0.9
DDX41-215ENST00000512431 GYG2O15488 501 aa9.41□□□□□ -0.9
DDX41-215ENST00000512431 TUSC2O75896 110 aa9.41□□□□□ -0.9
DDX41-215ENST00000512431 BAG2O95816 211 aa9.41□□□□□ -0.9
DDX41-215ENST00000512431 APOA2P02652 100 aa9.41□□□□□ -0.9
DDX41-215ENST00000512431 T-ENOLP0DO92 83 aa9.41□□□□□ -0.9
DDX41-215ENST00000512431 MGMTP16455 207 aa9.41□□□□□ -0.9
DDX41-215ENST00000512431 CAPGP40121 348 aa9.41□□□□□ -0.9
DDX41-215ENST00000512431 MAP2K4P45985 399 aa9.41□□□□□ -0.9
DDX41-215ENST00000512431 APOC4P55056 127 aa9.41□□□□□ -0.9
DDX41-215ENST00000512431 SNRPGP62308 76 aaKnown RBP9.41□□□□□ -0.9
DDX41-215ENST00000512431 Q6ZWC4 215 aa9.41□□□□□ -0.9
DDX41-215ENST00000512431 PDPNQ86YL7 162 aa9.41□□□□□ -0.9
DDX41-215ENST00000512431 JAGN1Q8N5M9 183 aa9.41□□□□□ -0.9
DDX41-215ENST00000512431 DRAXINQ8NBI3 349 aaPredicted RBP9.41□□□□□ -0.9
DDX41-215ENST00000512431 MUL1Q969V5 352 aa9.41□□□□□ -0.9
DDX41-215ENST00000512431 SULT4A1Q9BR01 284 aa9.41□□□□□ -0.9
DDX41-215ENST00000512431 ERVK13-1Q9NX77 482 aa9.41□□□□□ -0.9
DDX41-215ENST00000512431 C2orf70A6NJV1 201 aa9.4□□□□□ -0.9
DDX41-215ENST00000512431 FAM223BA6NKX1 122 aa9.4□□□□□ -0.9
DDX41-215ENST00000512431 BMPR1BO00238 502 aa9.4□□□□□ -0.9
DDX41-215ENST00000512431 MPPED1O15442 326 aa9.4□□□□□ -0.9
DDX41-215ENST00000512431 PDCD6O75340 191 aa9.4□□□□□ -0.9
DDX41-215ENST00000512431 CRTAPO75718 401 aaPredicted RBP9.4□□□□□ -0.9
DDX41-215ENST00000512431 IGKV1-16P04430 117 aa9.4□□□□□ -0.9
DDX41-215ENST00000512431 MED14OSP0DP75 135 aa9.4□□□□□ -0.9
DDX41-215ENST00000512431 SNRPBP14678 240 aaKnown RBP9.4□□□□□ -0.9
DDX41-215ENST00000512431 GTF2A1P52655 376 aaPredicted RBP9.4□□□□□ -0.9
DDX41-215ENST00000512431 ATP5G2Q06055 141 aa9.4□□□□□ -0.9
DDX41-215ENST00000512431 EXOSC2Q13868 293 aaKnown RBP9.4□□□□□ -0.9
DDX41-215ENST00000512431 HMGN3Q15651 99 aa9.4□□□□□ -0.9
DDX41-215ENST00000512431 FAM209BQ5JX69 171 aa9.4□□□□□ -0.9
DDX41-215ENST00000512431 AWAT2Q6E213 333 aa9.4□□□□□ -0.9
DDX41-215ENST00000512431 RPL22L1Q6P5R6 122 aaKnown RBP9.4□□□□□ -0.9
DDX41-215ENST00000512431 FAM223AQ8IWN6 122 aa9.4□□□□□ -0.9
DDX41-215ENST00000512431 EDARADDQ8WWZ3 215 aa9.4□□□□□ -0.9
DDX41-215ENST00000512431 OR14A2Q96R54 314 aa9.4□□□□□ -0.9
DDX41-215ENST00000512431 DNAH10Q8IVF4 4471 aa9.4□□□□□ -0.9
DDX41-215ENST00000512431 ITGB1BP1O14713 200 aa9.39□□□□□ -0.91
DDX41-215ENST00000512431 OR9G9P0C7N8 305 aa9.39□□□□□ -0.91
DDX41-215ENST00000512431 PJVKQ0ZLH3 352 aa9.39□□□□□ -0.91
DDX41-215ENST00000512431 DNAL1Q4LDG9 190 aa9.39□□□□□ -0.91
DDX41-215ENST00000512431 CCDC58Q4VC31 144 aa9.39□□□□□ -0.91
DDX41-215ENST00000512431 ZNF57Q68EA5 555 aaPredicted RBP9.39□□□□□ -0.91
DDX41-215ENST00000512431 AMIGO2Q86SJ2 522 aa9.39□□□□□ -0.91
DDX41-215ENST00000512431 SETD6Q8TBK2 473 aa9.39□□□□□ -0.91
DDX41-215ENST00000512431 Q96M66 194 aa9.39□□□□□ -0.91
DDX41-215ENST00000512431 NEDD4LQ96PU5 975 aa9.39□□□□□ -0.91
DDX41-215ENST00000512431 CHMP1AQ9HD42 196 aaPredicted RBP9.39□□□□□ -0.91
DDX41-215ENST00000512431 ZNF221Q9UK13 617 aa9.39□□□□□ -0.91
DDX41-215ENST00000512431 ORC6Q9Y5N6 252 aa9.39□□□□□ -0.91
DDX41-215ENST00000512431 HECTD4Q9Y4D8 3996 aa9.39□□□□□ -0.91
DDX41-215ENST00000512431 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP9.38□□□□□ -0.91
DDX41-215ENST00000512431 MSGN1A6NI15 193 aa9.38□□□□□ -0.91
DDX41-215ENST00000512431 UBE2CO00762 179 aa9.38□□□□□ -0.91
DDX41-215ENST00000512431 IFNA4P05014 189 aa9.38□□□□□ -0.91
DDX41-215ENST00000512431 APELAP0DMC3 54 aa9.38□□□□□ -0.91
DDX41-215ENST00000512431 FCGR1AP12314 374 aa9.38□□□□□ -0.91
DDX41-215ENST00000512431 IGFBP3P17936 291 aaPredicted RBP9.38□□□□□ -0.91
DDX41-215ENST00000512431 CBLN1P23435 193 aa9.38□□□□□ -0.91
DDX41-215ENST00000512431 CEACAM6P40199 344 aa9.38□□□□□ -0.91
DDX41-215ENST00000512431 RHOGP84095 191 aa9.38□□□□□ -0.91
DDX41-215ENST00000512431 CBX3Q13185 183 aa9.38□□□□□ -0.91
DDX41-215ENST00000512431 DEFB135Q30KP9 77 aa9.38□□□□□ -0.91
DDX41-215ENST00000512431 SIGIRRQ6IA17 410 aa9.38□□□□□ -0.91
DDX41-215ENST00000512431 LINC00336Q6ZUF6 198 aa9.38□□□□□ -0.91
DDX41-215ENST00000512431 ADAD2Q8NCV1 583 aaKnown RBP9.38□□□□□ -0.91
DDX41-215ENST00000512431 ORAI1Q96D31 301 aa9.38□□□□□ -0.91
DDX41-215ENST00000512431 AKIP1Q9NQ31 210 aa9.38□□□□□ -0.91
DDX41-215ENST00000512431 SLC35D1Q9NTN3 355 aa9.38□□□□□ -0.91
DDX41-215ENST00000512431 ZNF230Q9UIE0 474 aaPredicted RBP9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms