RNA–Protein interactions for RNA: ENST00000478658.1

USF3-202, Transcript of upstream transcription factor family member 3, humanhuman

APPRIS P2 TSL 5 BASIC

Gene USF3, Length 8,461 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF3-202ENST00000478658 HIST1H2BAQ96A08 127 aa4.75□□□□□ -1.65
USF3-202ENST00000478658 ALKBH3Q96Q83 286 aaPredicted RBP4.75□□□□□ -1.65
USF3-202ENST00000478658 ZMAT4Q9H898 229 aa4.75□□□□□ -1.65
USF3-202ENST00000478658 SLC25A10Q9UBX3 287 aaPredicted RBP4.75□□□□□ -1.65
USF3-202ENST00000478658 LAMTOR2Q9Y2Q5 125 aa4.75□□□□□ -1.65
USF3-202ENST00000478658 OR51B2Q9Y5P1 312 aa4.75□□□□□ -1.65
USF3-202ENST00000478658 A0A087WX48 190 aa4.75□□□□□ -1.65
USF3-202ENST00000478658 ADARB2-AS1A8MUL3 147 aa4.75□□□□□ -1.65
USF3-202ENST00000478658 IL11P20809 199 aa4.75□□□□□ -1.65
USF3-202ENST00000478658 LPAR6P43657 344 aa4.75□□□□□ -1.65
USF3-202ENST00000478658 GAGE2BQ13066 116 aa4.75□□□□□ -1.65
USF3-202ENST00000478658 UTF1Q5T230 341 aa4.75□□□□□ -1.65
USF3-202ENST00000478658 ASTLQ6HA08 431 aaPredicted RBP4.75□□□□□ -1.65
USF3-202ENST00000478658 SLC16A11Q8NCK7 471 aa4.75□□□□□ -1.65
USF3-202ENST00000478658 MRAPQ8TCY5 172 aa4.75□□□□□ -1.65
USF3-202ENST00000478658 TMEM54Q969K7 222 aa4.75□□□□□ -1.65
USF3-202ENST00000478658 PLA2G3Q9NZ20 509 aa4.75□□□□□ -1.65
USF3-202ENST00000478658 FAM90A27PA6NNH2 459 aa4.75□□□□□ -1.65
USF3-202ENST00000478658 C16orf97H3BN30 126 aa4.75□□□□□ -1.65
USF3-202ENST00000478658 SIGLEC5O15389 551 aa4.75□□□□□ -1.65
USF3-202ENST00000478658 PDCD6O75340 191 aa4.75□□□□□ -1.65
USF3-202ENST00000478658 CCL3L1P16619 93 aa4.75□□□□□ -1.65
USF3-202ENST00000478658 SIGLEC14Q08ET2 396 aa4.75□□□□□ -1.65
USF3-202ENST00000478658 IRF2BP2Q7Z5L9 587 aa4.75□□□□□ -1.65
USF3-202ENST00000478658 OR10D4PQ8NGN7 298 aa4.75□□□□□ -1.65
USF3-202ENST00000478658 OR5C1Q8NGR4 320 aa4.75□□□□□ -1.65
USF3-202ENST00000478658 OR52N5Q8NH56 324 aa4.75□□□□□ -1.65
USF3-202ENST00000478658 KLRG1Q96E93 195 aa4.75□□□□□ -1.65
USF3-202ENST00000478658 SMIM30A4D0T7 59 aa4.75□□□□□ -1.65
USF3-202ENST00000478658 H3BTX0 84 aa4.75□□□□□ -1.65
USF3-202ENST00000478658 CYBAP13498 195 aa4.75□□□□□ -1.65
USF3-202ENST00000478658 OPRL1P41146 370 aa4.75□□□□□ -1.65
USF3-202ENST00000478658 GFRA1P56159 465 aa4.75□□□□□ -1.65
USF3-202ENST00000478658 MRPL52Q86TS9 123 aaKnown RBP4.75□□□□□ -1.65
USF3-202ENST00000478658 BHLHE23Q8NDY6 225 aa4.75□□□□□ -1.65
USF3-202ENST00000478658 OR5AN1Q8NGI8 311 aa4.75□□□□□ -1.65
USF3-202ENST00000478658 RASL10AQ92737 203 aa4.75□□□□□ -1.65
USF3-202ENST00000478658 C4orf45Q96LM5 186 aa4.75□□□□□ -1.65
USF3-202ENST00000478658 PKD1L3Q7Z443 1732 aa4.75□□□□□ -1.65
USF3-202ENST00000478658 ATAD5Q96QE3 1844 aa4.75□□□□□ -1.65
USF3-202ENST00000478658 TNFSF14O43557 240 aa4.74□□□□□ -1.65
USF3-202ENST00000478658 SRSF2Q01130 221 aaKnown RBP4.74□□□□□ -1.65
USF3-202ENST00000478658 TCEAL1Q15170 157 aa4.74□□□□□ -1.65
USF3-202ENST00000478658 TMEM167AQ8TBQ9 72 aa4.74□□□□□ -1.65
USF3-202ENST00000478658 GPR146Q96CH1 333 aa4.74□□□□□ -1.65
USF3-202ENST00000478658 C5orf30Q96GV9 206 aa4.74□□□□□ -1.65
USF3-202ENST00000478658 NEU1Q99519 415 aa4.74□□□□□ -1.65
USF3-202ENST00000478658 DIP2BQ9P265 1576 aa4.74□□□□□ -1.65
USF3-202ENST00000478658 A0A1B0GWA3 101 aa4.74□□□□□ -1.65
USF3-202ENST00000478658 IQCF3P0C7M6 154 aa4.74□□□□□ -1.65
USF3-202ENST00000478658 ISL1P61371 349 aa4.74□□□□□ -1.65
USF3-202ENST00000478658 PPP1R1AQ13522 171 aa4.74□□□□□ -1.65
USF3-202ENST00000478658 GATAD1Q8WUU5 269 aa4.74□□□□□ -1.65
USF3-202ENST00000478658 SLC50A1Q9BRV3 221 aa4.74□□□□□ -1.65
USF3-202ENST00000478658 TLNRD1Q9H1K6 362 aa4.74□□□□□ -1.65
USF3-202ENST00000478658 CXCL16Q9H2A7 254 aa4.74□□□□□ -1.65
USF3-202ENST00000478658 ZNF430Q9H8G1 570 aaPredicted RBP4.74□□□□□ -1.65
USF3-202ENST00000478658 ZMIZ1Q9ULJ6 1067 aa4.74□□□□□ -1.65
USF3-202ENST00000478658 SMCHD1A6NHR9 2005 aa4.74□□□□□ -1.65
USF3-202ENST00000478658 WNK3Q9BYP7 1800 aa4.74□□□□□ -1.65
USF3-202ENST00000478658 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa4.74□□□□□ -1.65
USF3-202ENST00000478658 IQCF6A8MYZ5 107 aa4.74□□□□□ -1.65
USF3-202ENST00000478658 ACRP10323 421 aa4.74□□□□□ -1.65
USF3-202ENST00000478658 SAXO2Q658L1 398 aa4.74□□□□□ -1.65
USF3-202ENST00000478658 ADGRA1Q86SQ6 560 aa4.74□□□□□ -1.65
USF3-202ENST00000478658 PFN4Q8NHR9 129 aa4.74□□□□□ -1.65
USF3-202ENST00000478658 NEU4Q8WWR8 484 aaPredicted RBP4.74□□□□□ -1.65
USF3-202ENST00000478658 AHRRA9YTQ3 701 aa4.74□□□□□ -1.65
USF3-202ENST00000478658 F2Z2F3 143 aa4.74□□□□□ -1.65
USF3-202ENST00000478658 RRHO14718 337 aa4.74□□□□□ -1.65
USF3-202ENST00000478658 HOXC11O43248 304 aaPredicted RBP4.74□□□□□ -1.65
USF3-202ENST00000478658 B4GALT3O60512 393 aa4.74□□□□□ -1.65
USF3-202ENST00000478658 GFRA3O60609 400 aa4.74□□□□□ -1.65
USF3-202ENST00000478658 GCM2O75603 506 aaPredicted RBP4.74□□□□□ -1.65
USF3-202ENST00000478658 FAM157BP0CG42 384 aa4.74□□□□□ -1.65
USF3-202ENST00000478658 SRFP11831 508 aa4.74□□□□□ -1.65
USF3-202ENST00000478658 EDN3P14138 238 aa4.74□□□□□ -1.65
USF3-202ENST00000478658 RPS26P62854 115 aaKnown RBP4.74□□□□□ -1.65
USF3-202ENST00000478658 B4GALNT1Q00973 533 aa4.74□□□□□ -1.65
USF3-202ENST00000478658 CIARTQ8N365 385 aaPredicted RBP4.74□□□□□ -1.65
USF3-202ENST00000478658 MAFAQ8NHW3 353 aaPredicted RBP4.74□□□□□ -1.65
USF3-202ENST00000478658 RDH5Q92781 318 aa4.74□□□□□ -1.65
USF3-202ENST00000478658 NPY6RQ99463 290 aa4.74□□□□□ -1.65
USF3-202ENST00000478658 SYT11Q9BT88 431 aa4.74□□□□□ -1.65
USF3-202ENST00000478658 CEACAM18A8MTB9 384 aa4.74□□□□□ -1.65
USF3-202ENST00000478658 FAM72CH0Y354 149 aa4.74□□□□□ -1.65
USF3-202ENST00000478658 FAM72DQ6L9T8 149 aa4.74□□□□□ -1.65
USF3-202ENST00000478658 SH2D6Q7Z4S9 175 aa4.74□□□□□ -1.65
USF3-202ENST00000478658 MS4A3Q96HJ5 214 aa4.74□□□□□ -1.65
USF3-202ENST00000478658 SIGMAR1Q99720 223 aa4.74□□□□□ -1.65
USF3-202ENST00000478658 PHF7Q9BWX1 381 aaPredicted RBP4.74□□□□□ -1.65
USF3-202ENST00000478658 CXorf36Q9H7Y0 433 aa4.74□□□□□ -1.65
USF3-202ENST00000478658 COL16A1Q07092 1604 aaPredicted RBP4.74□□□□□ -1.65
USF3-202ENST00000478658 DENND4AQ7Z401 1863 aa4.74□□□□□ -1.65
USF3-202ENST00000478658 SCN7AQ01118 1682 aa4.74□□□□□ -1.65
USF3-202ENST00000478658 PEX7O00628 323 aa4.74□□□□□ -1.65
USF3-202ENST00000478658 NDUFB6O95139 128 aa4.74□□□□□ -1.65
USF3-202ENST00000478658 COX7A1P24310 79 aa4.74□□□□□ -1.65
USF3-202ENST00000478658 ZNF121P58317 390 aaPredicted RBP4.74□□□□□ -1.65
USF3-202ENST00000478658 SLAQ13239 276 aa4.74□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms