RNA–Protein interactions for RNA: ENST00000380180.7

PDLIM5-205, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 2,020 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-205ENST00000380180 SPAG16Q8N0X2 631 aa16.41■□□□□ 0.22
PDLIM5-205ENST00000380180 OR2C3Q8N628 320 aa16.41■□□□□ 0.22
PDLIM5-205ENST00000380180 CORO2AQ92828 525 aa16.41■□□□□ 0.22
PDLIM5-205ENST00000380180 HSD17B10Q99714 261 aaKnown RBP16.41■□□□□ 0.22
PDLIM5-205ENST00000380180 SLC25A10Q9UBX3 287 aaPredicted RBP16.41■□□□□ 0.22
PDLIM5-205ENST00000380180 CACNG5Q9UF02 275 aa16.41■□□□□ 0.22
PDLIM5-205ENST00000380180 IGHV1-69-2A0A0G2JMI3 117 aa16.41■□□□□ 0.22
PDLIM5-205ENST00000380180 FAM24AA6NFZ4 105 aa16.41■□□□□ 0.22
PDLIM5-205ENST00000380180 KIAA1324LA8MWY0 1029 aaPredicted RBP16.41■□□□□ 0.22
PDLIM5-205ENST00000380180 TNFRSF13BO14836 293 aaPredicted RBP16.41■□□□□ 0.22
PDLIM5-205ENST00000380180 ZNF816Q0VGE8 651 aaPredicted RBP16.41■□□□□ 0.22
PDLIM5-205ENST00000380180 TMED6Q8WW62 240 aa16.41■□□□□ 0.22
PDLIM5-205ENST00000380180 LEAP2Q969E1 77 aa16.41■□□□□ 0.22
PDLIM5-205ENST00000380180 TMEM204Q9BSN7 226 aa16.41■□□□□ 0.22
PDLIM5-205ENST00000380180 GFOD1Q9NXC2 390 aa16.41■□□□□ 0.22
PDLIM5-205ENST00000380180 CHST1O43916 411 aa16.4■□□□□ 0.22
PDLIM5-205ENST00000380180 FCN3O75636 299 aa16.4■□□□□ 0.22
PDLIM5-205ENST00000380180 VAMP2P63027 116 aa16.4■□□□□ 0.22
PDLIM5-205ENST00000380180 FAM216AQ8WUB2 273 aa16.4■□□□□ 0.22
PDLIM5-205ENST00000380180 MED9Q9NWA0 146 aa16.4■□□□□ 0.22
PDLIM5-205ENST00000380180 ZNF729A6NN14 1252 aaPredicted RBP16.4■□□□□ 0.22
PDLIM5-205ENST00000380180 B8ZZF3 427 aa16.4■□□□□ 0.22
PDLIM5-205ENST00000380180 JTBO76095 146 aa16.4■□□□□ 0.22
PDLIM5-205ENST00000380180 TMEM50AO95807 157 aa16.4■□□□□ 0.22
PDLIM5-205ENST00000380180 GAPDHP04406 335 aaKnown RBP16.4■□□□□ 0.22
PDLIM5-205ENST00000380180 CAV2P51636 162 aa16.4■□□□□ 0.22
PDLIM5-205ENST00000380180 EIF5AP63241 154 aaKnown RBP16.4■□□□□ 0.22
PDLIM5-205ENST00000380180 LYPD2Q6UXB3 125 aa16.4■□□□□ 0.22
PDLIM5-205ENST00000380180 TCTEX1D1Q8N7M0 179 aa16.4■□□□□ 0.22
PDLIM5-205ENST00000380180 IFI27L2Q9H2X8 130 aa16.4■□□□□ 0.22
PDLIM5-205ENST00000380180 LRBAP50851 2863 aa16.39■□□□□ 0.21
PDLIM5-205ENST00000380180 hADV38S2A0JD32 116 aa16.39■□□□□ 0.21
PDLIM5-205ENST00000380180 WRBO00258 174 aa16.39■□□□□ 0.21
PDLIM5-205ENST00000380180 SLC31A2O15432 143 aa16.39■□□□□ 0.21
PDLIM5-205ENST00000380180 KRASP01116 189 aa16.39■□□□□ 0.21
PDLIM5-205ENST00000380180 UQCRFS1P47985 274 aa16.39■□□□□ 0.21
PDLIM5-205ENST00000380180 REG4Q9BYZ8 158 aa16.39■□□□□ 0.21
PDLIM5-205ENST00000380180 LINC00574Q9H8X3 128 aa16.39■□□□□ 0.21
PDLIM5-205ENST00000380180 LYRM2Q9NU23 88 aaPredicted RBP16.39■□□□□ 0.21
PDLIM5-205ENST00000380180 TEX46H3BTG2 121 aa16.38■□□□□ 0.21
PDLIM5-205ENST00000380180 MMP23AO75900 390 aa16.38■□□□□ 0.21
PDLIM5-205ENST00000380180 S1PR2O95136 353 aa16.38■□□□□ 0.21
PDLIM5-205ENST00000380180 MMP9P14780 707 aa16.38■□□□□ 0.21
PDLIM5-205ENST00000380180 NFYBP25208 207 aa16.38■□□□□ 0.21
PDLIM5-205ENST00000380180 DUTP33316 252 aaKnown RBP16.38■□□□□ 0.21
PDLIM5-205ENST00000380180 G6PCP35575 357 aa16.38■□□□□ 0.21
PDLIM5-205ENST00000380180 EWSR1Q01844 656 aaKnown RBP eCLIP16.38■□□□□ 0.21
PDLIM5-205ENST00000380180 AANATQ16613 207 aa16.38■□□□□ 0.21
PDLIM5-205ENST00000380180 WFDC1Q9HC57 220 aa16.38■□□□□ 0.21
PDLIM5-205ENST00000380180 FAM212BQ9NTI7 297 aaPredicted RBP16.38■□□□□ 0.21
PDLIM5-205ENST00000380180 IDI2-AS1Q9NZ38 188 aa16.38■□□□□ 0.21
PDLIM5-205ENST00000380180 PFDN2Q9UHV9 154 aa16.38■□□□□ 0.21
PDLIM5-205ENST00000380180 MMP24Q9Y5R2 645 aa16.38■□□□□ 0.21
PDLIM5-205ENST00000380180 A0A1W2PPE3 182 aa16.38■□□□□ 0.21
PDLIM5-205ENST00000380180 IGSF23A1L1A6 192 aa16.38■□□□□ 0.21
PDLIM5-205ENST00000380180 ITGB1BP1O14713 200 aa16.38■□□□□ 0.21
PDLIM5-205ENST00000380180 GNLYP22749 145 aa16.38■□□□□ 0.21
PDLIM5-205ENST00000380180 PAX9P55771 341 aa16.38■□□□□ 0.21
PDLIM5-205ENST00000380180 HFEQ30201 348 aa16.38■□□□□ 0.21
PDLIM5-205ENST00000380180 RPL39P5Q59GN2 51 aa16.38■□□□□ 0.21
PDLIM5-205ENST00000380180 CT45A1Q5HYN5 189 aa16.38■□□□□ 0.21
PDLIM5-205ENST00000380180 NCR3LG1Q68D85 454 aa16.38■□□□□ 0.21
PDLIM5-205ENST00000380180 CT45A3Q8NHU0 189 aa16.38■□□□□ 0.21
PDLIM5-205ENST00000380180 ABHD14AQ9BUJ0 271 aa16.38■□□□□ 0.21
PDLIM5-205ENST00000380180 C19orf12Q9NSK7 152 aa16.38■□□□□ 0.21
PDLIM5-205ENST00000380180 LINC00312Q9Y6C7 94 aa16.38■□□□□ 0.21
PDLIM5-205ENST00000380180 RPL31P62899 125 aaKnown RBP16.37■□□□□ 0.21
PDLIM5-205ENST00000380180 TMEM252Q8N6L7 170 aa16.37■□□□□ 0.21
PDLIM5-205ENST00000380180 UBAC2Q8NBM4 344 aa16.37■□□□□ 0.21
PDLIM5-205ENST00000380180 BARX1Q9HBU1 254 aaPredicted RBP16.37■□□□□ 0.21
PDLIM5-205ENST00000380180 ACACBO00763 2458 aa16.37■□□□□ 0.21
PDLIM5-205ENST00000380180 MFSD2BA6NFX1 497 aa16.36■□□□□ 0.21
PDLIM5-205ENST00000380180 FGF16O43320 207 aa16.36■□□□□ 0.21
PDLIM5-205ENST00000380180 NDUFB3O43676 98 aa16.36■□□□□ 0.21
PDLIM5-205ENST00000380180 ZG16O60844 167 aa16.36■□□□□ 0.21
PDLIM5-205ENST00000380180 RAB7AP51149 207 aa16.36■□□□□ 0.21
PDLIM5-205ENST00000380180 MEF2CQ06413 473 aaPredicted RBP16.36■□□□□ 0.21
PDLIM5-205ENST00000380180 ZNF273Q14593 569 aa16.36■□□□□ 0.21
PDLIM5-205ENST00000380180 C4orf17Q53FE4 359 aa16.36■□□□□ 0.21
PDLIM5-205ENST00000380180 ODF3L1Q8IXM7 274 aa16.36■□□□□ 0.21
PDLIM5-205ENST00000380180 RNF141Q8WVD5 230 aa16.36■□□□□ 0.21
PDLIM5-205ENST00000380180 SLC25A31Q9H0C2 315 aa16.36■□□□□ 0.21
PDLIM5-205ENST00000380180 CTSZQ9UBR2 303 aa16.36■□□□□ 0.21
PDLIM5-205ENST00000380180 LYNX1G3V0Z9 82 aa16.36■□□□□ 0.21
PDLIM5-205ENST00000380180 M0R1X1 148 aa16.36■□□□□ 0.21
PDLIM5-205ENST00000380180 P0C879 139 aa16.36■□□□□ 0.21
PDLIM5-205ENST00000380180 FAM157CP0CG43 387 aa16.36■□□□□ 0.21
PDLIM5-205ENST00000380180 LYNX1P0DP58 116 aa16.36■□□□□ 0.21
PDLIM5-205ENST00000380180 COL8A2P25067 703 aa16.36■□□□□ 0.21
PDLIM5-205ENST00000380180 C1orf229Q6ZS94 237 aaPredicted RBP16.36■□□□□ 0.21
PDLIM5-205ENST00000380180 COA4Q9NYJ1 87 aa16.36■□□□□ 0.21
PDLIM5-205ENST00000380180 TAS2R3Q9NYW6 316 aa16.36■□□□□ 0.21
PDLIM5-205ENST00000380180 KAAG1Q9UBP8 84 aa16.36■□□□□ 0.21
PDLIM5-205ENST00000380180 I3L521 148 aa16.35■□□□□ 0.21
PDLIM5-205ENST00000380180 SYNGR2O43760 224 aa16.35■□□□□ 0.21
PDLIM5-205ENST00000380180 FBXO24O75426 580 aa16.35■□□□□ 0.21
PDLIM5-205ENST00000380180 ATG12O94817 140 aa16.35■□□□□ 0.21
PDLIM5-205ENST00000380180 ERVFRD-1P60508 538 aa16.35■□□□□ 0.21
PDLIM5-205ENST00000380180 LRRC10Q5BKY1 277 aa16.35■□□□□ 0.21
PDLIM5-205ENST00000380180 PRAMEF5Q5TYX0 476 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms