RNA–Protein interactions for RNA: ENST00000374879.4

TMEFF1-201, Transcript of transmembrane protein with EGF like and two follistatin like domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEFF1, Length 2,611 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEFF1-201ENST00000374879 C17orf82Q86X59 251 aaPredicted RBP17.46■□□□□ 0.39
TMEFF1-201ENST00000374879 CSTL1Q9H114 145 aa17.46■□□□□ 0.39
TMEFF1-201ENST00000374879 TIMM9Q9Y5J7 89 aa17.46■□□□□ 0.39
TMEFF1-201ENST00000374879 WDR87Q6ZQQ6 2873 aa17.45■□□□□ 0.38
TMEFF1-201ENST00000374879 ZNF816-ZNF321PA0A0X1KG74 233 aa17.45■□□□□ 0.38
TMEFF1-201ENST00000374879 CD300LBA8K4G0 201 aa17.45■□□□□ 0.38
TMEFF1-201ENST00000374879 TUSC2O75896 110 aa17.45■□□□□ 0.38
TMEFF1-201ENST00000374879 ATP5G3P48201 142 aa17.45■□□□□ 0.38
TMEFF1-201ENST00000374879 Q0VG73 95 aa17.45■□□□□ 0.38
TMEFF1-201ENST00000374879 PLPPR5Q32ZL2 321 aa17.45■□□□□ 0.38
TMEFF1-201ENST00000374879 OR1L3Q8NH93 324 aa17.45■□□□□ 0.38
TMEFF1-201ENST00000374879 OR5P3Q8WZ94 311 aa17.45■□□□□ 0.38
TMEFF1-201ENST00000374879 IGKV1-6A0A0C4DH72 117 aa17.45■□□□□ 0.38
TMEFF1-201ENST00000374879 MDFIC2A0A1B0GVS7 189 aa17.45■□□□□ 0.38
TMEFF1-201ENST00000374879 A0A1W2PR77 199 aa17.45■□□□□ 0.38
TMEFF1-201ENST00000374879 TIAF1O95411 115 aa17.45■□□□□ 0.38
TMEFF1-201ENST00000374879 FBLP22087 321 aaKnown RBP17.45■□□□□ 0.38
TMEFF1-201ENST00000374879 TNFSF4P23510 183 aa17.45■□□□□ 0.38
TMEFF1-201ENST00000374879 OTX1P32242 354 aaPredicted RBP17.45■□□□□ 0.38
TMEFF1-201ENST00000374879 GUCA1AP43080 201 aaPredicted RBP17.45■□□□□ 0.38
TMEFF1-201ENST00000374879 THBS3P49746 956 aa17.45■□□□□ 0.38
TMEFF1-201ENST00000374879 LHFPL2Q6ZUX7 228 aa17.45■□□□□ 0.38
TMEFF1-201ENST00000374879 SYT13Q7L8C5 426 aa17.45■□□□□ 0.38
TMEFF1-201ENST00000374879 PLEK2Q9NYT0 353 aa17.45■□□□□ 0.38
TMEFF1-201ENST00000374879 LOC102725191A0A1B0GVB3 256 aa17.44■□□□□ 0.38
TMEFF1-201ENST00000374879 IGKV1-39P01597 117 aa17.44■□□□□ 0.38
TMEFF1-201ENST00000374879 IGKV1D-39P04432 117 aa17.44■□□□□ 0.38
TMEFF1-201ENST00000374879 CD27P26842 260 aa17.44■□□□□ 0.38
TMEFF1-201ENST00000374879 OR1D5P58170 312 aa17.44■□□□□ 0.38
TMEFF1-201ENST00000374879 ZNF90Q03938 601 aa17.44■□□□□ 0.38
TMEFF1-201ENST00000374879 KRTCAP3Q53RY4 240 aa17.44■□□□□ 0.38
TMEFF1-201ENST00000374879 PHYHD1Q5SRE7 291 aa17.44■□□□□ 0.38
TMEFF1-201ENST00000374879 THAP3Q8WTV1 239 aaPredicted RBP17.44■□□□□ 0.38
TMEFF1-201ENST00000374879 CHTOPQ9Y3Y2 248 aaKnown RBP17.44■□□□□ 0.38
TMEFF1-201ENST00000374879 FCN1O00602 326 aa17.44■□□□□ 0.38
TMEFF1-201ENST00000374879 CARD18P57730 90 aa17.44■□□□□ 0.38
TMEFF1-201ENST00000374879 VAMP3Q15836 100 aa17.44■□□□□ 0.38
TMEFF1-201ENST00000374879 ATOH7Q8N100 152 aa17.44■□□□□ 0.38
TMEFF1-201ENST00000374879 GNB4Q9HAV0 340 aa17.44■□□□□ 0.38
TMEFF1-201ENST00000374879 ZNF253O75346 499 aa17.43■□□□□ 0.38
TMEFF1-201ENST00000374879 OCIAD2Q56VL3 154 aa17.43■□□□□ 0.38
TMEFF1-201ENST00000374879 CST9LQ9H4G1 147 aa17.43■□□□□ 0.38
TMEFF1-201ENST00000374879 SLC35D1Q9NTN3 355 aa17.43■□□□□ 0.38
TMEFF1-201ENST00000374879 MRPS16Q9Y3D3 137 aaKnown RBP17.43■□□□□ 0.38
TMEFF1-201ENST00000374879 SDK1Q7Z5N4 2213 aa17.43■□□□□ 0.38
TMEFF1-201ENST00000374879 TRBV20OR9-2A0A075B6H5 130 aa17.43■□□□□ 0.38
TMEFF1-201ENST00000374879 TRAV30A0A087WSZ9 112 aa17.43■□□□□ 0.38
TMEFF1-201ENST00000374879 AMTP48728 403 aa17.43■□□□□ 0.38
TMEFF1-201ENST00000374879 FOXL2P58012 376 aa17.43■□□□□ 0.38
TMEFF1-201ENST00000374879 RPL19P84098 196 aaKnown RBP17.43■□□□□ 0.38
TMEFF1-201ENST00000374879 SHISA6Q6ZSJ9 500 aa17.43■□□□□ 0.38
TMEFF1-201ENST00000374879 OXGR1Q96P68 337 aa17.43■□□□□ 0.38
TMEFF1-201ENST00000374879 ASXL3Q9C0F0 2248 aa17.43■□□□□ 0.38
TMEFF1-201ENST00000374879 VPS13AQ96RL7 3174 aa17.42■□□□□ 0.38
TMEFF1-201ENST00000374879 TMEM238C9JI98 176 aa17.42■□□□□ 0.38
TMEFF1-201ENST00000374879 LMO7DNF2Z398 122 aa17.42■□□□□ 0.38
TMEFF1-201ENST00000374879 IER3P46695 156 aa17.42■□□□□ 0.38
TMEFF1-201ENST00000374879 SLC24A4Q8NFF2 622 aa17.42■□□□□ 0.38
TMEFF1-201ENST00000374879 CNTRLQ7Z7A1 2325 aa17.42■□□□□ 0.38
TMEFF1-201ENST00000374879 PMCHP20382 165 aa17.42■□□□□ 0.38
TMEFF1-201ENST00000374879 UHRF2Q96PU4 802 aa17.42■□□□□ 0.38
TMEFF1-201ENST00000374879 SEPSECSQ9HD40 501 aaKnown RBP17.42■□□□□ 0.38
TMEFF1-201ENST00000374879 HSPB6O14558 160 aa17.41■□□□□ 0.38
TMEFF1-201ENST00000374879 IGKV1-5P01602 117 aa17.41■□□□□ 0.38
TMEFF1-201ENST00000374879 KLHDC1Q8N7A1 406 aa17.41■□□□□ 0.38
TMEFF1-201ENST00000374879 OR10G8Q8NGN5 311 aa17.41■□□□□ 0.38
TMEFF1-201ENST00000374879 SGCZQ96LD1 299 aa17.41■□□□□ 0.38
TMEFF1-201ENST00000374879 DPRXA6NFQ7 191 aa17.41■□□□□ 0.38
TMEFF1-201ENST00000374879 SLC17A3O00476 420 aa17.41■□□□□ 0.38
TMEFF1-201ENST00000374879 TCTEX1D1Q8N7M0 179 aa17.41■□□□□ 0.38
TMEFF1-201ENST00000374879 ZIC4Q8N9L1 334 aa17.41■□□□□ 0.38
TMEFF1-201ENST00000374879 SPTSSAQ969W0 71 aa17.41■□□□□ 0.38
TMEFF1-201ENST00000374879 IL36GQ9NZH8 169 aa17.41■□□□□ 0.38
TMEFF1-201ENST00000374879 UNC13CQ8NB66 2214 aa17.41■□□□□ 0.38
TMEFF1-201ENST00000374879 COL5A1P20908 1838 aaPredicted RBP17.4■□□□□ 0.38
TMEFF1-201ENST00000374879 IGHV3-20A0A0C4DH32 117 aa17.4■□□□□ 0.38
TMEFF1-201ENST00000374879 SNURFLB1AK76 121 aa17.4■□□□□ 0.38
TMEFF1-201ENST00000374879 PDE6DO43924 150 aa17.4■□□□□ 0.38
TMEFF1-201ENST00000374879 C3orf79P0CE67 100 aa17.4■□□□□ 0.38
TMEFF1-201ENST00000374879 TIMP3P35625 211 aa17.4■□□□□ 0.38
TMEFF1-201ENST00000374879 CFHR1Q03591 330 aa17.4■□□□□ 0.38
TMEFF1-201ENST00000374879 Q6ZS49 121 aa17.4■□□□□ 0.38
TMEFF1-201ENST00000374879 TMPRSS7Q7RTY8 843 aa17.4■□□□□ 0.38
TMEFF1-201ENST00000374879 CORO2AQ92828 525 aa17.4■□□□□ 0.38
TMEFF1-201ENST00000374879 NABP1Q96AH0 204 aa17.4■□□□□ 0.38
TMEFF1-201ENST00000374879 DMDP11532 3685 aa17.4■□□□□ 0.38
TMEFF1-201ENST00000374879 FAM166BA8MTA8 275 aa17.4■□□□□ 0.38
TMEFF1-201ENST00000374879 COX5AP20674 150 aa17.4■□□□□ 0.38
TMEFF1-201ENST00000374879 TFF3Q07654 80 aa17.4■□□□□ 0.38
TMEFF1-201ENST00000374879 HLA-DRB5Q30154 266 aa17.4■□□□□ 0.38
TMEFF1-201ENST00000374879 RCHY1Q96PM5 261 aa17.4■□□□□ 0.38
TMEFF1-201ENST00000374879 ASCC3Q8N3C0 2202 aaKnown RBP17.4■□□□□ 0.38
TMEFF1-201ENST00000374879 IGHV1OR21-1A0A087WYE8 117 aa17.39■□□□□ 0.37
TMEFF1-201ENST00000374879 IGHV2-26A0A0B4J1V2 119 aa17.39■□□□□ 0.37
TMEFF1-201ENST00000374879 A0A1W2PS18 150 aa17.39■□□□□ 0.37
TMEFF1-201ENST00000374879 IFI44Q8TCB0 444 aa17.39■□□□□ 0.37
TMEFF1-201ENST00000374879 NUDT11Q96G61 164 aa17.39■□□□□ 0.37
TMEFF1-201ENST00000374879 IGLC7A0M8Q6 106 aa17.39■□□□□ 0.37
TMEFF1-201ENST00000374879 GFRA1P56159 465 aa17.39■□□□□ 0.37
TMEFF1-201ENST00000374879 OCC1Q8TAD7 63 aa17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms