RNA–Protein interactions for RNA: ENST00000373327.4

TRAF3IP1-201, Transcript of TRAF3 interacting protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRAF3IP1, Length 4,279 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1-201ENST00000373327 FAM157CP0CG43 387 aa14.99□□□□□ -0.01
TRAF3IP1-201ENST00000373327 TAAR6Q96RI8 345 aa14.99□□□□□ -0.01
TRAF3IP1-201ENST00000373327 C12orf77C9JDV5 145 aa14.99□□□□□ -0.01
TRAF3IP1-201ENST00000373327 SCGB1D1O95968 90 aa14.99□□□□□ -0.01
TRAF3IP1-201ENST00000373327 IGHV3-48P01763 117 aa14.99□□□□□ -0.01
TRAF3IP1-201ENST00000373327 FOXF2Q12947 444 aa14.99□□□□□ -0.01
TRAF3IP1-201ENST00000373327 RBKSQ9H477 322 aa14.99□□□□□ -0.01
TRAF3IP1-201ENST00000373327 TUBD1Q9UJT1 453 aa14.99□□□□□ -0.01
TRAF3IP1-201ENST00000373327 ZNF320A2RRD8 509 aa14.98□□□□□ -0.01
TRAF3IP1-201ENST00000373327 SMPD2O60906 423 aa14.98□□□□□ -0.01
TRAF3IP1-201ENST00000373327 MPZP25189 248 aa14.98□□□□□ -0.01
TRAF3IP1-201ENST00000373327 ACOT6Q3I5F7 207 aaPredicted RBP14.98□□□□□ -0.01
TRAF3IP1-201ENST00000373327 ZNF66Q6ZN08 573 aa14.98□□□□□ -0.01
TRAF3IP1-201ENST00000373327 ITLN1Q8WWA0 313 aa14.98□□□□□ -0.01
TRAF3IP1-201ENST00000373327 CCL13Q99616 98 aa14.98□□□□□ -0.01
TRAF3IP1-201ENST00000373327 TCEAL7Q9BRU2 100 aa14.98□□□□□ -0.01
TRAF3IP1-201ENST00000373327 TGIF2-C20orf24A0A0A6YYL0 155 aa14.98□□□□□ -0.01
TRAF3IP1-201ENST00000373327 HFEQ30201 348 aa14.98□□□□□ -0.01
TRAF3IP1-201ENST00000373327 INO80CQ6PI98 192 aaPredicted RBP14.98□□□□□ -0.01
TRAF3IP1-201ENST00000373327 BCL2L2Q92843 193 aaPredicted RBP14.98□□□□□ -0.01
TRAF3IP1-201ENST00000373327 WDYHV1Q96HA8 205 aa14.98□□□□□ -0.01
TRAF3IP1-201ENST00000373327 RAMP3O60896 148 aa14.98□□□□□ -0.01
TRAF3IP1-201ENST00000373327 C9orf152Q5JTZ5 239 aa14.98□□□□□ -0.01
TRAF3IP1-201ENST00000373327 LRP11Q86VZ4 500 aa14.98□□□□□ -0.01
TRAF3IP1-201ENST00000373327 EIF4E3Q8N5X7 224 aaKnown RBP14.98□□□□□ -0.01
TRAF3IP1-201ENST00000373327 TRAV38-1A0A0B4J264 116 aa14.97□□□□□ -0.01
TRAF3IP1-201ENST00000373327 BTBD17A6NE02 478 aa14.97□□□□□ -0.01
TRAF3IP1-201ENST00000373327 CLDN34H7C241 214 aa14.97□□□□□ -0.01
TRAF3IP1-201ENST00000373327 PHOX2AO14813 284 aa14.97□□□□□ -0.01
TRAF3IP1-201ENST00000373327 IL18BPO95998 194 aa14.97□□□□□ -0.01
TRAF3IP1-201ENST00000373327 CECR9P0C854 216 aa14.97□□□□□ -0.01
TRAF3IP1-201ENST00000373327 RPS2P15880 293 aaKnown RBP14.97□□□□□ -0.01
TRAF3IP1-201ENST00000373327 GFRALQ6UXV0 394 aa14.97□□□□□ -0.01
TRAF3IP1-201ENST00000373327 OR5D13Q8NGL4 314 aa14.97□□□□□ -0.01
TRAF3IP1-201ENST00000373327 TOLLIPQ9H0E2 274 aa14.97□□□□□ -0.01
TRAF3IP1-201ENST00000373327 USP34Q70CQ2 3546 aa14.97□□□□□ -0.01
TRAF3IP1-201ENST00000373327 A0A1W2PRD5 423 aa14.97□□□□□ -0.01
TRAF3IP1-201ENST00000373327 A0A1W2PRF3 423 aa14.97□□□□□ -0.01
TRAF3IP1-201ENST00000373327 A0A1W2PRM7 423 aa14.97□□□□□ -0.01
TRAF3IP1-201ENST00000373327 ETV2O00321 342 aaPredicted RBP14.97□□□□□ -0.01
TRAF3IP1-201ENST00000373327 OR5G3P0C626 314 aa14.97□□□□□ -0.01
TRAF3IP1-201ENST00000373327 CDC34P49427 236 aaPredicted RBP14.97□□□□□ -0.01
TRAF3IP1-201ENST00000373327 C9orf106Q8NAJ2 232 aa14.97□□□□□ -0.01
TRAF3IP1-201ENST00000373327 C17orf98A8MV24 154 aa14.97□□□□□ -0.01
TRAF3IP1-201ENST00000373327 TRGC2P03986 189 aa14.97□□□□□ -0.01
TRAF3IP1-201ENST00000373327 TNFSF10P50591 281 aa14.97□□□□□ -0.01
TRAF3IP1-201ENST00000373327 PRB3Q04118 309 aaPredicted RBP14.97□□□□□ -0.01
TRAF3IP1-201ENST00000373327 TMEM45BQ96B21 275 aa14.97□□□□□ -0.01
TRAF3IP1-201ENST00000373327 C18orf12Q96KH6 178 aa14.97□□□□□ -0.01
TRAF3IP1-201ENST00000373327 CIB3Q96Q77 187 aaPredicted RBP14.97□□□□□ -0.01
TRAF3IP1-201ENST00000373327 GAR1Q9NY12 217 aaKnown RBP14.97□□□□□ -0.01
TRAF3IP1-201ENST00000373327 MKRN2OSH3BPM6 223 aa14.97□□□□□ -0.01
TRAF3IP1-201ENST00000373327 UCP3P55916 312 aa14.97□□□□□ -0.01
TRAF3IP1-201ENST00000373327 TMEM241Q24JQ0 296 aa14.97□□□□□ -0.01
TRAF3IP1-201ENST00000373327 KIAA1456Q9P272 454 aa14.97□□□□□ -0.01
TRAF3IP1-201ENST00000373327 RALYQ9UKM9 306 aaKnown RBP14.97□□□□□ -0.01
TRAF3IP1-201ENST00000373327 A0A0G2JRQ6 117 aa14.96□□□□□ -0.01
TRAF3IP1-201ENST00000373327 UCP1P25874 307 aa14.96□□□□□ -0.01
TRAF3IP1-201ENST00000373327 RPL39P5Q59GN2 51 aa14.96□□□□□ -0.01
TRAF3IP1-201ENST00000373327 KCNIP4Q6PIL6 250 aa14.96□□□□□ -0.01
TRAF3IP1-201ENST00000373327 SAMD10Q9BYL1 202 aa14.96□□□□□ -0.01
TRAF3IP1-201ENST00000373327 LINC00470Q9BZP3 86 aa14.96□□□□□ -0.01
TRAF3IP1-201ENST00000373327 COMMD5Q9GZQ3 224 aa14.96□□□□□ -0.01
TRAF3IP1-201ENST00000373327 WIPI2Q9Y4P8 454 aa14.96□□□□□ -0.01
TRAF3IP1-201ENST00000373327 PRR27Q6MZM9 219 aa14.96□□□□□ -0.01
TRAF3IP1-201ENST00000373327 VSIRQ9H7M9 311 aa14.96□□□□□ -0.01
TRAF3IP1-201ENST00000373327 GYPAP02724 150 aa14.96□□□□□ -0.02
TRAF3IP1-201ENST00000373327 HERPUD1Q15011 391 aa14.96□□□□□ -0.02
TRAF3IP1-201ENST00000373327 STUMQ69YW2 141 aa14.96□□□□□ -0.02
TRAF3IP1-201ENST00000373327 OR13A1Q8NGR1 328 aa14.96□□□□□ -0.02
TRAF3IP1-201ENST00000373327 TMEM171Q8WVE6 324 aa14.96□□□□□ -0.02
TRAF3IP1-201ENST00000373327 AUP1Q9Y679 476 aa14.96□□□□□ -0.02
TRAF3IP1-201ENST00000373327 CFPP27918 469 aa14.95□□□□□ -0.02
TRAF3IP1-201ENST00000373327 MRPS11P82912 194 aaKnown RBP14.95□□□□□ -0.02
TRAF3IP1-201ENST00000373327 ABHD12Q8N2K0 398 aa14.95□□□□□ -0.02
TRAF3IP1-201ENST00000373327 TMEM147Q9BVK8 224 aa14.95□□□□□ -0.02
TRAF3IP1-201ENST00000373327 FRYLO94915 3013 aa14.95□□□□□ -0.02
TRAF3IP1-201ENST00000373327 TRBV6-7A0A0A0MS04 114 aa14.95□□□□□ -0.02
TRAF3IP1-201ENST00000373327 IGHV3-21A0A0B4J1V1 117 aa14.95□□□□□ -0.02
TRAF3IP1-201ENST00000373327 LRRC30A6NM36 301 aa14.95□□□□□ -0.02
TRAF3IP1-201ENST00000373327 CYB5R3P00387 301 aaPredicted RBP14.95□□□□□ -0.02
TRAF3IP1-201ENST00000373327 ACSM6Q6P461 480 aa14.95□□□□□ -0.02
TRAF3IP1-201ENST00000373327 OR8G5Q8NG78 346 aa14.95□□□□□ -0.02
TRAF3IP1-201ENST00000373327 UHRF2Q96PU4 802 aa14.95□□□□□ -0.02
TRAF3IP1-201ENST00000373327 AP4M1O00189 453 aa14.95□□□□□ -0.02
TRAF3IP1-201ENST00000373327 FABP1P07148 127 aa14.95□□□□□ -0.02
TRAF3IP1-201ENST00000373327 SELLP14151 372 aa14.95□□□□□ -0.02
TRAF3IP1-201ENST00000373327 HIST1H3AP68431 136 aa14.95□□□□□ -0.02
TRAF3IP1-201ENST00000373327 DEFA6Q01524 100 aa14.95□□□□□ -0.02
TRAF3IP1-201ENST00000373327 RBMXL3Q8N7X1 1067 aaKnown RBP14.95□□□□□ -0.02
TRAF3IP1-201ENST00000373327 PSPNO60542 156 aa14.95□□□□□ -0.02
TRAF3IP1-201ENST00000373327 LY86O95711 162 aa14.95□□□□□ -0.02
TRAF3IP1-201ENST00000373327 LYPD6Q86Y78 171 aa14.95□□□□□ -0.02
TRAF3IP1-201ENST00000373327 LINC00518Q8N0U6 118 aa14.95□□□□□ -0.02
TRAF3IP1-201ENST00000373327 MIOXQ9UGB7 285 aa14.95□□□□□ -0.02
TRAF3IP1-201ENST00000373327 NKX6-3A6NJ46 265 aa14.94□□□□□ -0.02
TRAF3IP1-201ENST00000373327 BSXQ3C1V8 233 aa14.94□□□□□ -0.02
TRAF3IP1-201ENST00000373327 DHRS7BQ6IAN0 325 aaPredicted RBP14.94□□□□□ -0.02
TRAF3IP1-201ENST00000373327 WFIKKN1Q96NZ8 548 aa14.94□□□□□ -0.02
TRAF3IP1-201ENST00000373327 GINS3Q9BRX5 216 aa14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms