RNA–Protein interactions for RNA: ENST00000370966.9

DEPDC1-201, Transcript of DEP domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DEPDC1, Length 4,586 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-201ENST00000370966 J3QRE1 110 aa10.18□□□□□ -0.78
DEPDC1-201ENST00000370966 ZIC3O60481 467 aa10.18□□□□□ -0.78
DEPDC1-201ENST00000370966 SMIM17P0DL12 118 aa10.18□□□□□ -0.78
DEPDC1-201ENST00000370966 IGFBP3P17936 291 aaPredicted RBP10.18□□□□□ -0.78
DEPDC1-201ENST00000370966 NPBWR2P48146 333 aa10.18□□□□□ -0.78
DEPDC1-201ENST00000370966 CAMPP49913 170 aa10.18□□□□□ -0.78
DEPDC1-201ENST00000370966 HNRNPA3P51991 378 aaKnown RBP10.18□□□□□ -0.78
DEPDC1-201ENST00000370966 MEF2BQ02080 365 aaPredicted RBP10.18□□□□□ -0.78
DEPDC1-201ENST00000370966 NCMAPQ5T1S8 102 aa10.18□□□□□ -0.78
DEPDC1-201ENST00000370966 SPNS3Q6ZMD2 512 aa10.18□□□□□ -0.78
DEPDC1-201ENST00000370966 ZNF826PQ6ZT77 177 aa10.18□□□□□ -0.78
DEPDC1-201ENST00000370966 GALNT14Q96FL9 552 aa10.18□□□□□ -0.78
DEPDC1-201ENST00000370966 RSG1Q9BU20 258 aa10.18□□□□□ -0.78
DEPDC1-201ENST00000370966 ESPL1Q14674 2120 aa10.18□□□□□ -0.78
DEPDC1-201ENST00000370966 A0A1B0GTI1 187 aa10.17□□□□□ -0.78
DEPDC1-201ENST00000370966 hCG_38984A0A1B0GV85 526 aa10.17□□□□□ -0.78
DEPDC1-201ENST00000370966 LGALS7P47929 136 aa10.17□□□□□ -0.78
DEPDC1-201ENST00000370966 ASPHD2Q6ICH7 369 aa10.17□□□□□ -0.78
DEPDC1-201ENST00000370966 LINC00518Q8N0U6 118 aa10.17□□□□□ -0.78
DEPDC1-201ENST00000370966 PRSS3P2Q8NHM4 247 aa10.17□□□□□ -0.78
DEPDC1-201ENST00000370966 ITLN1Q8WWA0 313 aa10.17□□□□□ -0.78
DEPDC1-201ENST00000370966 ZNF714Q96N38 554 aa10.17□□□□□ -0.78
DEPDC1-201ENST00000370966 RASL11BQ9BPW5 248 aa10.17□□□□□ -0.78
DEPDC1-201ENST00000370966 MRPL13Q9BYD1 178 aaKnown RBP10.17□□□□□ -0.78
DEPDC1-201ENST00000370966 ZP1P60852 638 aa10.17□□□□□ -0.78
DEPDC1-201ENST00000370966 SELENOTP62341 195 aa10.17□□□□□ -0.78
DEPDC1-201ENST00000370966 TMEM30BQ3MIR4 351 aa10.17□□□□□ -0.78
DEPDC1-201ENST00000370966 CCDC144NLQ6NUI1 221 aa10.17□□□□□ -0.78
DEPDC1-201ENST00000370966 ZNF880Q6PDB4 577 aa10.17□□□□□ -0.78
DEPDC1-201ENST00000370966 OR1L1Q8NH94 360 aa10.17□□□□□ -0.78
DEPDC1-201ENST00000370966 ZNF596Q8TC21 504 aa10.17□□□□□ -0.78
DEPDC1-201ENST00000370966 P2RX4Q99571 388 aa10.17□□□□□ -0.78
DEPDC1-201ENST00000370966 IGSF23A1L1A6 192 aa10.17□□□□□ -0.78
DEPDC1-201ENST00000370966 FAM157AC9JC47 383 aa10.17□□□□□ -0.78
DEPDC1-201ENST00000370966 PTBP3O95758 552 aaKnown RBP10.17□□□□□ -0.78
DEPDC1-201ENST00000370966 CTSSP25774 331 aa10.17□□□□□ -0.78
DEPDC1-201ENST00000370966 CD81P60033 236 aa10.17□□□□□ -0.78
DEPDC1-201ENST00000370966 Q8WTZ3 238 aa10.17□□□□□ -0.78
DEPDC1-201ENST00000370966 TIMP4Q99727 224 aa10.17□□□□□ -0.78
DEPDC1-201ENST00000370966 ZNF703Q9H7S9 590 aaPredicted RBP10.17□□□□□ -0.78
DEPDC1-201ENST00000370966 ACACAQ13085 2346 aa10.17□□□□□ -0.78
DEPDC1-201ENST00000370966 LOC102723996A0A087X1L8 192 aa10.17□□□□□ -0.78
DEPDC1-201ENST00000370966 IFNL4K9M1U5 179 aa10.17□□□□□ -0.78
DEPDC1-201ENST00000370966 SYNGR3O43761 229 aa10.17□□□□□ -0.78
DEPDC1-201ENST00000370966 RFPL3SP0C7P2 107 aa10.17□□□□□ -0.78
DEPDC1-201ENST00000370966 ZNF708P17019 499 aa10.17□□□□□ -0.78
DEPDC1-201ENST00000370966 CCL13Q99616 98 aa10.17□□□□□ -0.78
DEPDC1-201ENST00000370966 VPS25Q9BRG1 176 aa10.17□□□□□ -0.78
DEPDC1-201ENST00000370966 MRPS18CQ9Y3D5 142 aaKnown RBP10.17□□□□□ -0.78
DEPDC1-201ENST00000370966 IGLV3-32A0A0A0MS00 114 aa10.16□□□□□ -0.78
DEPDC1-201ENST00000370966 NDUFA2O43678 99 aa10.16□□□□□ -0.78
DEPDC1-201ENST00000370966 F12P00748 615 aaPredicted RBP10.16□□□□□ -0.78
DEPDC1-201ENST00000370966 FCER1GP30273 86 aa10.16□□□□□ -0.78
DEPDC1-201ENST00000370966 Q6ZT83 130 aa10.16□□□□□ -0.78
DEPDC1-201ENST00000370966 TLNRD1Q9H1K6 362 aa10.16□□□□□ -0.78
DEPDC1-201ENST00000370966 AKIRIN1Q9H9L7 192 aaPredicted RBP10.16□□□□□ -0.78
DEPDC1-201ENST00000370966 JPT1Q9UK76 154 aa10.16□□□□□ -0.78
DEPDC1-201ENST00000370966 SPTBN1Q01082 2364 aaKnown RBP10.16□□□□□ -0.78
DEPDC1-201ENST00000370966 A0A0B4J293 547 aa10.16□□□□□ -0.78
DEPDC1-201ENST00000370966 SRSF10O75494 262 aaKnown RBP10.16□□□□□ -0.78
DEPDC1-201ENST00000370966 CYB5R3P00387 301 aaPredicted RBP10.16□□□□□ -0.78
DEPDC1-201ENST00000370966 GAS1P54826 345 aa10.16□□□□□ -0.78
DEPDC1-201ENST00000370966 C1QL2Q7Z5L3 287 aa10.16□□□□□ -0.78
DEPDC1-201ENST00000370966 OR4C12Q96R67 309 aa10.16□□□□□ -0.78
DEPDC1-201ENST00000370966 PXMP4Q9Y6I8 212 aa10.16□□□□□ -0.78
DEPDC1-201ENST00000370966 DANCRP0C864 163 aa10.16□□□□□ -0.78
DEPDC1-201ENST00000370966 SUCLG1P53597 346 aaKnown RBP10.16□□□□□ -0.78
DEPDC1-201ENST00000370966 FAM3BP58499 235 aaPredicted RBP10.16□□□□□ -0.78
DEPDC1-201ENST00000370966 OR52M1Q8NGK5 317 aa10.16□□□□□ -0.78
DEPDC1-201ENST00000370966 OR5P3Q8WZ94 311 aa10.16□□□□□ -0.78
DEPDC1-201ENST00000370966 LOC101059948A0A1B0GTJ6 334 aa10.16□□□□□ -0.78
DEPDC1-201ENST00000370966 P01737 135 aa10.16□□□□□ -0.78
DEPDC1-201ENST00000370966 HIST1H1EP10412 219 aaKnown RBP10.16□□□□□ -0.78
DEPDC1-201ENST00000370966 COL8A1P27658 744 aa10.16□□□□□ -0.78
DEPDC1-201ENST00000370966 TNFRSF9Q07011 255 aa10.16□□□□□ -0.78
DEPDC1-201ENST00000370966 PACRGQ96M98 296 aaPredicted RBP10.16□□□□□ -0.78
DEPDC1-201ENST00000370966 A0A1W2PPE3 182 aa10.15□□□□□ -0.78
DEPDC1-201ENST00000370966 CBY3A6NI87 242 aa10.15□□□□□ -0.78
DEPDC1-201ENST00000370966 HLA-DRB5Q30154 266 aa10.15□□□□□ -0.78
DEPDC1-201ENST00000370966 SSX7Q7RTT5 188 aa10.15□□□□□ -0.78
DEPDC1-201ENST00000370966 SMIM8Q96KF7 97 aa10.15□□□□□ -0.78
DEPDC1-201ENST00000370966 RBKSQ9H477 322 aa10.15□□□□□ -0.78
DEPDC1-201ENST00000370966 CALYQ9NYX4 217 aa10.15□□□□□ -0.78
DEPDC1-201ENST00000370966 FUT9Q9Y231 359 aa10.15□□□□□ -0.78
DEPDC1-201ENST00000370966 LNP1A1A4G5 178 aa10.15□□□□□ -0.78
DEPDC1-201ENST00000370966 RPL27AP46776 148 aaKnown RBP10.15□□□□□ -0.78
DEPDC1-201ENST00000370966 MMDQ15546 238 aa10.15□□□□□ -0.78
DEPDC1-201ENST00000370966 VAMP3Q15836 100 aa10.15□□□□□ -0.78
DEPDC1-201ENST00000370966 NSUN5P2Q63ZY6 315 aa10.15□□□□□ -0.78
DEPDC1-201ENST00000370966 PQLC2Q6ZP29 291 aa10.15□□□□□ -0.78
DEPDC1-201ENST00000370966 OR8I2Q8N0Y5 310 aa10.15□□□□□ -0.78
DEPDC1-201ENST00000370966 ASCL3Q9NQ33 180 aa10.15□□□□□ -0.78
DEPDC1-201ENST00000370966 AKAP6Q13023 2319 aa10.15□□□□□ -0.78
DEPDC1-201ENST00000370966 CORTO00230 105 aa10.15□□□□□ -0.79
DEPDC1-201ENST00000370966 GOSR1O95249 250 aa10.15□□□□□ -0.79
DEPDC1-201ENST00000370966 SFTPCP11686 197 aa10.15□□□□□ -0.79
DEPDC1-201ENST00000370966 USF1P22415 310 aaPredicted RBP10.15□□□□□ -0.79
DEPDC1-201ENST00000370966 HSPE1P61604 102 aaKnown RBP10.15□□□□□ -0.79
DEPDC1-201ENST00000370966 ZNF818PQ6ZRF7 136 aa10.15□□□□□ -0.79
DEPDC1-201ENST00000370966 PLSCR2Q9NRY7 297 aa10.15□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms