RNA–Protein interactions for RNA: ENST00000289495.7

PPP1R9A-201, Transcript of protein phosphatase 1 regulatory subunit 9A, humanhuman

TSL 1 (best) BASIC

Gene PPP1R9A, Length 3,983 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R9A-201ENST00000289495 SERF2P84101 59 aa4.07□□□□□ -1.76
PPP1R9A-201ENST00000289495 TNFRSF9Q07011 255 aa4.07□□□□□ -1.76
PPP1R9A-201ENST00000289495 RNF212Q495C1 297 aa4.07□□□□□ -1.76
PPP1R9A-201ENST00000289495 ADAM5Q6NVV9 412 aa4.07□□□□□ -1.76
PPP1R9A-201ENST00000289495 VHLLQ6RSH7 139 aa4.07□□□□□ -1.76
PPP1R9A-201ENST00000289495 BTNL3Q6UXE8 466 aa4.07□□□□□ -1.76
PPP1R9A-201ENST00000289495 LINC00518Q8N0U6 118 aa4.07□□□□□ -1.76
PPP1R9A-201ENST00000289495 FAM24BQ8N5W8 94 aa4.07□□□□□ -1.76
PPP1R9A-201ENST00000289495 CYB561D1Q8N8Q1 229 aa4.07□□□□□ -1.76
PPP1R9A-201ENST00000289495 WDR31Q8NA23 367 aa4.07□□□□□ -1.76
PPP1R9A-201ENST00000289495 OR10P1Q8NGE3 313 aa4.07□□□□□ -1.76
PPP1R9A-201ENST00000289495 RFESDQ8TAC1 157 aa4.07□□□□□ -1.76
PPP1R9A-201ENST00000289495 HSD17B10Q99714 261 aaKnown RBP4.07□□□□□ -1.76
PPP1R9A-201ENST00000289495 MAP1LC3BQ9GZQ8 125 aa4.07□□□□□ -1.76
PPP1R9A-201ENST00000289495 TUBA4BQ9H853 241 aa4.07□□□□□ -1.76
PPP1R9A-201ENST00000289495 ASCL3Q9NQ33 180 aa4.07□□□□□ -1.76
PPP1R9A-201ENST00000289495 SLC39A9Q9NUM3 307 aa4.07□□□□□ -1.76
PPP1R9A-201ENST00000289495 COA4Q9NYJ1 87 aa4.07□□□□□ -1.76
PPP1R9A-201ENST00000289495 hCG_1809904A0A1W2PP81 198 aa4.07□□□□□ -1.76
PPP1R9A-201ENST00000289495 A0A1W2PR64 198 aa4.07□□□□□ -1.76
PPP1R9A-201ENST00000289495 A0A1W2PRV1 198 aa4.07□□□□□ -1.76
PPP1R9A-201ENST00000289495 MEX3AA1L020 520 aaKnown RBP4.07□□□□□ -1.76
PPP1R9A-201ENST00000289495 S1PR2O95136 353 aa4.07□□□□□ -1.76
PPP1R9A-201ENST00000289495 ADH4P08319 380 aa4.07□□□□□ -1.76
PPP1R9A-201ENST00000289495 SRP19P09132 144 aaKnown RBP4.07□□□□□ -1.76
PPP1R9A-201ENST00000289495 BCL2P10415 239 aa4.07□□□□□ -1.76
PPP1R9A-201ENST00000289495 RAB5AP20339 215 aa4.07□□□□□ -1.76
PPP1R9A-201ENST00000289495 SSTR5P35346 364 aa4.07□□□□□ -1.76
PPP1R9A-201ENST00000289495 GLIPR1P48060 266 aa4.07□□□□□ -1.76
PPP1R9A-201ENST00000289495 EDDM3BP56851 147 aa4.07□□□□□ -1.76
PPP1R9A-201ENST00000289495 ATP6V1FQ16864 119 aa4.07□□□□□ -1.76
PPP1R9A-201ENST00000289495 ZNF585BQ52M93 769 aa4.07□□□□□ -1.76
PPP1R9A-201ENST00000289495 TMEM41BQ5BJD5 291 aa4.07□□□□□ -1.76
PPP1R9A-201ENST00000289495 PRAMEF5Q5TYX0 476 aa4.07□□□□□ -1.76
PPP1R9A-201ENST00000289495 SPSB3Q6PJ21 355 aa4.07□□□□□ -1.76
PPP1R9A-201ENST00000289495 TREML4Q6UXN2 200 aa4.07□□□□□ -1.76
PPP1R9A-201ENST00000289495 RBMS3Q6XE24 437 aaKnown RBP4.07□□□□□ -1.76
PPP1R9A-201ENST00000289495 ZNF66Q6ZN08 573 aa4.07□□□□□ -1.76
PPP1R9A-201ENST00000289495 Q6ZRM9 215 aa4.07□□□□□ -1.76
PPP1R9A-201ENST00000289495 TPRX1Q8N7U7 411 aa4.07□□□□□ -1.76
PPP1R9A-201ENST00000289495 DTD1Q8TEA8 209 aa4.07□□□□□ -1.76
PPP1R9A-201ENST00000289495 RBKSQ9H477 322 aa4.07□□□□□ -1.76
PPP1R9A-201ENST00000289495 HES4Q9HCC6 221 aa4.07□□□□□ -1.76
PPP1R9A-201ENST00000289495 IGHV1-18A0A0C4DH31 117 aa4.07□□□□□ -1.76
PPP1R9A-201ENST00000289495 LOC102723971A0A1B0GUV8 181 aa4.07□□□□□ -1.76
PPP1R9A-201ENST00000289495 DEFB108AA8MXU0 73 aa4.07□□□□□ -1.76
PPP1R9A-201ENST00000289495 C17orf112F2Z3M2 114 aa4.07□□□□□ -1.76
PPP1R9A-201ENST00000289495 CLDN14O95500 239 aa4.07□□□□□ -1.76
PPP1R9A-201ENST00000289495 PTBP3O95758 552 aaKnown RBP4.07□□□□□ -1.76
PPP1R9A-201ENST00000289495 FGF7P21781 194 aa4.07□□□□□ -1.76
PPP1R9A-201ENST00000289495 RPS10P46783 165 aaKnown RBP4.07□□□□□ -1.76
PPP1R9A-201ENST00000289495 KLF3P57682 345 aaPredicted RBP4.07□□□□□ -1.76
PPP1R9A-201ENST00000289495 CCL20P78556 96 aa4.07□□□□□ -1.76
PPP1R9A-201ENST00000289495 FOXF2Q12947 444 aa4.07□□□□□ -1.76
PPP1R9A-201ENST00000289495 HNF4GQ14541 408 aa4.07□□□□□ -1.76
PPP1R9A-201ENST00000289495 ICAM4Q14773 271 aa4.07□□□□□ -1.76
PPP1R9A-201ENST00000289495 IGFL2Q6UWQ7 119 aa4.07□□□□□ -1.76
PPP1R9A-201ENST00000289495 LHX4Q969G2 390 aa4.07□□□□□ -1.76
PPP1R9A-201ENST00000289495 RAB39BQ96DA2 213 aa4.07□□□□□ -1.76
PPP1R9A-201ENST00000289495 COQ2Q96H96 371 aa4.07□□□□□ -1.76
PPP1R9A-201ENST00000289495 LURAP1Q96LR2 239 aa4.07□□□□□ -1.76
PPP1R9A-201ENST00000289495 C12orf57Q99622 126 aa4.07□□□□□ -1.76
PPP1R9A-201ENST00000289495 TCEAL7Q9BRU2 100 aa4.07□□□□□ -1.76
PPP1R9A-201ENST00000289495 WDR61Q9GZS3 305 aaKnown RBP4.07□□□□□ -1.76
PPP1R9A-201ENST00000289495 RPRMQ9NS64 109 aa4.07□□□□□ -1.76
PPP1R9A-201ENST00000289495 ODAMA1E959 279 aa4.06□□□□□ -1.76
PPP1R9A-201ENST00000289495 SMCO3A2RU48 225 aa4.06□□□□□ -1.76
PPP1R9A-201ENST00000289495 RAB29O14966 203 aa4.06□□□□□ -1.76
PPP1R9A-201ENST00000289495 NDUFA2O43678 99 aa4.06□□□□□ -1.76
PPP1R9A-201ENST00000289495 MBP02144 154 aa4.06□□□□□ -1.76
PPP1R9A-201ENST00000289495 OR8U8P0C7N1 319 aa4.06□□□□□ -1.76
PPP1R9A-201ENST00000289495 TNFSF4P23510 183 aa4.06□□□□□ -1.76
PPP1R9A-201ENST00000289495 LMO1P25800 156 aa4.06□□□□□ -1.76
PPP1R9A-201ENST00000289495 PRDX2P32119 198 aa4.06□□□□□ -1.76
PPP1R9A-201ENST00000289495 FGF8P55075 233 aaPredicted RBP4.06□□□□□ -1.76
PPP1R9A-201ENST00000289495 OR2B8PP59922 312 aa4.06□□□□□ -1.76
PPP1R9A-201ENST00000289495 RPP30P78346 268 aaKnown RBP4.06□□□□□ -1.76
PPP1R9A-201ENST00000289495 ZNF674Q2M3X9 581 aa4.06□□□□□ -1.76
PPP1R9A-201ENST00000289495 LRRC75BQ2VPJ9 315 aa4.06□□□□□ -1.76
PPP1R9A-201ENST00000289495 MBNL2Q5VZF2 373 aaKnown RBP4.06□□□□□ -1.76
PPP1R9A-201ENST00000289495 OR13A1Q8NGR1 328 aa4.06□□□□□ -1.76
PPP1R9A-201ENST00000289495 CLDND2Q8NHS1 167 aa4.06□□□□□ -1.76
PPP1R9A-201ENST00000289495 TAF15Q92804 592 aaKnown RBP eCLIP4.06□□□□□ -1.76
PPP1R9A-201ENST00000289495 R3HDM4Q96D70 268 aa4.06□□□□□ -1.76
PPP1R9A-201ENST00000289495 OR4C12Q96R67 309 aa4.06□□□□□ -1.76
PPP1R9A-201ENST00000289495 FAM234AQ9H0X4 552 aa4.06□□□□□ -1.76
PPP1R9A-201ENST00000289495 ZNF665Q9H7R5 613 aa4.06□□□□□ -1.76
PPP1R9A-201ENST00000289495 PARD6AQ9NPB6 346 aa4.06□□□□□ -1.76
PPP1R9A-201ENST00000289495 PLSCR4Q9NRQ2 329 aa4.06□□□□□ -1.76
PPP1R9A-201ENST00000289495 CLN8Q9UBY8 286 aa4.06□□□□□ -1.76
PPP1R9A-201ENST00000289495 FASNP49327 2511 aaKnown RBP4.06□□□□□ -1.76
PPP1R9A-201ENST00000289495 LRRC30A6NM36 301 aa4.06□□□□□ -1.76
PPP1R9A-201ENST00000289495 M0R1X1 148 aa4.06□□□□□ -1.76
PPP1R9A-201ENST00000289495 MGST3O14880 152 aa4.06□□□□□ -1.76
PPP1R9A-201ENST00000289495 S100A8P05109 93 aa4.06□□□□□ -1.76
PPP1R9A-201ENST00000289495 SNRPEP62304 92 aaKnown RBP4.06□□□□□ -1.76
PPP1R9A-201ENST00000289495 DLK1P80370 383 aa4.06□□□□□ -1.76
PPP1R9A-201ENST00000289495 PNRC1Q12796 327 aaPredicted RBP4.06□□□□□ -1.76
PPP1R9A-201ENST00000289495 GUSBP1Q15486 140 aa4.06□□□□□ -1.76
PPP1R9A-201ENST00000289495 OR4A16Q8NH70 328 aa4.06□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms