RNA–Protein interactions for RNA: ENST00000265735.11

SGCE-201, Transcript of sarcoglycan epsilon, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGCE, Length 1,694 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-201ENST00000265735 KIRREL1Q96J84 757 aa10.39□□□□□ -0.75
SGCE-201ENST00000265735 SLC5A7Q9GZV3 580 aa10.39□□□□□ -0.75
SGCE-201ENST00000265735 SEBOXQ9HB31 216 aaPredicted RBP10.39□□□□□ -0.75
SGCE-201ENST00000265735 KCNIP1Q9NZI2 227 aa10.39□□□□□ -0.75
SGCE-201ENST00000265735 UBQLN2Q9UHD9 624 aa10.39□□□□□ -0.75
SGCE-201ENST00000265735 RPUSD1Q9UJJ7 312 aaKnown RBP10.39□□□□□ -0.75
SGCE-201ENST00000265735 TNFSF18Q9UNG2 199 aa10.39□□□□□ -0.75
SGCE-201ENST00000265735 NKX6-3A6NJ46 265 aa10.38□□□□□ -0.75
SGCE-201ENST00000265735 MPPED1O15442 326 aa10.38□□□□□ -0.75
SGCE-201ENST00000265735 PET100P0DJ07 73 aa10.38□□□□□ -0.75
SGCE-201ENST00000265735 LRRC10Q5BKY1 277 aa10.38□□□□□ -0.75
SGCE-201ENST00000265735 LIAT1Q6ZQX7 453 aa10.38□□□□□ -0.75
SGCE-201ENST00000265735 H1FOOQ8IZA3 346 aaPredicted RBP10.38□□□□□ -0.75
SGCE-201ENST00000265735 LGI3Q8N145 548 aa10.38□□□□□ -0.75
SGCE-201ENST00000265735 CD177Q8N6Q3 437 aa10.38□□□□□ -0.75
SGCE-201ENST00000265735 LRTM2Q8N967 370 aa10.38□□□□□ -0.75
SGCE-201ENST00000265735 INO80EQ8NBZ0 244 aaPredicted RBP10.38□□□□□ -0.75
SGCE-201ENST00000265735 C8orf46Q8TAG6 207 aa10.38□□□□□ -0.75
SGCE-201ENST00000265735 SECTM1Q8WVN6 248 aa10.38□□□□□ -0.75
SGCE-201ENST00000265735 MBNL3Q9NUK0 354 aaKnown RBP10.38□□□□□ -0.75
SGCE-201ENST00000265735 OR2W1Q9Y3N9 320 aa10.38□□□□□ -0.75
SGCE-201ENST00000265735 C3orf85A0A1B0GTC6 90 aa10.38□□□□□ -0.75
SGCE-201ENST00000265735 MMP9P14780 707 aa10.38□□□□□ -0.75
SGCE-201ENST00000265735 EPHA1P21709 976 aa10.38□□□□□ -0.75
SGCE-201ENST00000265735 GNRHRP30968 328 aa10.38□□□□□ -0.75
SGCE-201ENST00000265735 PRDX2P32119 198 aa10.38□□□□□ -0.75
SGCE-201ENST00000265735 GABRA2P47869 451 aa10.38□□□□□ -0.75
SGCE-201ENST00000265735 CEBPDP49716 269 aaPredicted RBP10.38□□□□□ -0.75
SGCE-201ENST00000265735 SCGB2A2Q13296 93 aa10.38□□□□□ -0.75
SGCE-201ENST00000265735 EXOSC2Q13868 293 aaKnown RBP10.38□□□□□ -0.75
SGCE-201ENST00000265735 HMGN3Q15651 99 aa10.38□□□□□ -0.75
SGCE-201ENST00000265735 ACOT7LQ6ZUV0 252 aa10.38□□□□□ -0.75
SGCE-201ENST00000265735 CMTM1Q8IZ96 169 aa10.38□□□□□ -0.75
SGCE-201ENST00000265735 ZNF561Q8N587 486 aa10.38□□□□□ -0.75
SGCE-201ENST00000265735 KCNRGQ8N5I3 272 aa10.38□□□□□ -0.75
SGCE-201ENST00000265735 ZNRF1Q8ND25 227 aa10.38□□□□□ -0.75
SGCE-201ENST00000265735 OR10C1Q96KK4 312 aa10.38□□□□□ -0.75
SGCE-201ENST00000265735 FAM210AQ96ND0 272 aa10.38□□□□□ -0.75
SGCE-201ENST00000265735 DCTN5Q9BTE1 182 aa10.38□□□□□ -0.75
SGCE-201ENST00000265735 MBD2Q9UBB5 411 aa10.38□□□□□ -0.75
SGCE-201ENST00000265735 SLC25A10Q9UBX3 287 aaPredicted RBP10.38□□□□□ -0.75
SGCE-201ENST00000265735 NUP50Q9UKX7 468 aa10.38□□□□□ -0.75
SGCE-201ENST00000265735 PSPNO60542 156 aa10.37□□□□□ -0.75
SGCE-201ENST00000265735 S100A1P23297 94 aa10.37□□□□□ -0.75
SGCE-201ENST00000265735 NUP62P37198 522 aaPredicted RBP10.37□□□□□ -0.75
SGCE-201ENST00000265735 COL10A1Q03692 680 aa10.37□□□□□ -0.75
SGCE-201ENST00000265735 IAH1Q2TAA2 248 aaPredicted RBP10.37□□□□□ -0.75
SGCE-201ENST00000265735 SP6Q3SY56 376 aa10.37□□□□□ -0.75
SGCE-201ENST00000265735 GGNBP1Q5YKI7 109 aa10.37□□□□□ -0.75
SGCE-201ENST00000265735 C5orf24Q7Z6I8 188 aa10.37□□□□□ -0.75
SGCE-201ENST00000265735 LDLRAD3Q86YD5 345 aa10.37□□□□□ -0.75
SGCE-201ENST00000265735 PPP1R35Q8TAP8 253 aa10.37□□□□□ -0.75
SGCE-201ENST00000265735 IL1F10Q8WWZ1 152 aa10.37□□□□□ -0.75
SGCE-201ENST00000265735 SIRPDQ9H106 197 aa10.37□□□□□ -0.75
SGCE-201ENST00000265735 FBN1P35555 2871 aaKnown RBP10.37□□□□□ -0.75
SGCE-201ENST00000265735 PIGBOS1A0A0B4J2F0 54 aa10.36□□□□□ -0.75
SGCE-201ENST00000265735 KANTRA0A1W2PQU2 76 aa10.36□□□□□ -0.75
SGCE-201ENST00000265735 HSPA12AO43301 675 aa10.36□□□□□ -0.75
SGCE-201ENST00000265735 LYL1P12980 280 aa10.36□□□□□ -0.75
SGCE-201ENST00000265735 LUMP51884 338 aaPredicted RBP10.36□□□□□ -0.75
SGCE-201ENST00000265735 AP2S1P53680 142 aaPredicted RBP10.36□□□□□ -0.75
SGCE-201ENST00000265735 C6orf183Q5T699 404 aa10.36□□□□□ -0.75
SGCE-201ENST00000265735 PRSS54Q6PEW0 395 aa10.36□□□□□ -0.75
SGCE-201ENST00000265735 TRAT1Q6PIZ9 186 aa10.36□□□□□ -0.75
SGCE-201ENST00000265735 ZNF818PQ6ZRF7 136 aa10.36□□□□□ -0.75
SGCE-201ENST00000265735 TBC1D26Q86UD7 250 aa10.36□□□□□ -0.75
SGCE-201ENST00000265735 SLC51BQ86UW2 128 aa10.36□□□□□ -0.75
SGCE-201ENST00000265735 OR8H3Q8N146 312 aa10.36□□□□□ -0.75
SGCE-201ENST00000265735 GLYATL2Q8WU03 294 aa10.36□□□□□ -0.75
SGCE-201ENST00000265735 DCUN1D4Q92564 292 aa10.36□□□□□ -0.75
SGCE-201ENST00000265735 TAF9BQ9HBM6 251 aa10.36□□□□□ -0.75
SGCE-201ENST00000265735 GSKIPQ9P0R6 139 aa10.36□□□□□ -0.75
SGCE-201ENST00000265735 IGKV1D-13A0A0B4J2D9 117 aa10.35□□□□□ -0.75
SGCE-201ENST00000265735 MPTX1A8MV57 137 aa10.35□□□□□ -0.75
SGCE-201ENST00000265735 HSD17B6O14756 317 aa10.35□□□□□ -0.75
SGCE-201ENST00000265735 TCF21O43680 179 aa10.35□□□□□ -0.75
SGCE-201ENST00000265735 B3GALNT1O75752 331 aa10.35□□□□□ -0.75
SGCE-201ENST00000265735 IGHV4-38-2P0DP08 117 aa10.35□□□□□ -0.75
SGCE-201ENST00000265735 IGKV1-13P0DP09 117 aa10.35□□□□□ -0.75
SGCE-201ENST00000265735 OR3A1P47881 315 aa10.35□□□□□ -0.75
SGCE-201ENST00000265735 RAB14P61106 215 aa10.35□□□□□ -0.75
SGCE-201ENST00000265735 PAX5Q02548 391 aa10.35□□□□□ -0.75
SGCE-201ENST00000265735 IL15RAQ13261 267 aa10.35□□□□□ -0.75
SGCE-201ENST00000265735 C9orf139Q6ZV77 190 aa10.35□□□□□ -0.75
SGCE-201ENST00000265735 PRR18Q8N4B5 295 aa10.35□□□□□ -0.75
SGCE-201ENST00000265735 OR10V1Q8NGI7 309 aa10.35□□□□□ -0.75
SGCE-201ENST00000265735 TBX15Q96SF7 602 aa10.35□□□□□ -0.75
SGCE-201ENST00000265735 RNF126Q9BV68 326 aa10.35□□□□□ -0.75
SGCE-201ENST00000265735 TMEM222Q9H0R3 208 aa10.35□□□□□ -0.75
SGCE-201ENST00000265735 FAM234AQ9H0X4 552 aa10.35□□□□□ -0.75
SGCE-201ENST00000265735 CCL28Q9NRJ3 127 aa10.35□□□□□ -0.75
SGCE-201ENST00000265735 KIF25Q9UIL4 384 aa10.35□□□□□ -0.75
SGCE-201ENST00000265735 UBE2J1Q9Y385 318 aaPredicted RBP10.35□□□□□ -0.75
SGCE-201ENST00000265735 TMED3Q9Y3Q3 217 aa10.35□□□□□ -0.75
SGCE-201ENST00000265735 KPTNQ9Y664 436 aa10.35□□□□□ -0.75
SGCE-201ENST00000265735 TRAV39A0A0B4J263 110 aa10.34□□□□□ -0.75
SGCE-201ENST00000265735 RNF222A6NCQ9 220 aa10.34□□□□□ -0.75
SGCE-201ENST00000265735 K7N7A8 449 aa10.34□□□□□ -0.75
SGCE-201ENST00000265735 BCL2L11O43521 198 aa10.34□□□□□ -0.75
SGCE-201ENST00000265735 ZNF737O75373 536 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms