RNA–Protein interactions for RNA: ENSMUST00000108530.1

Nup88-202, Transcript of Nuclear pore complex protein Nup88, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Nup88, Length 2,389 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88-202ENSMUST00000108530 Olfr94Q6UAH0 386 aa12.63□□□□□ -0.39
Nup88-202ENSMUST00000108530 Olfr222Q7TS30 318 aa12.63□□□□□ -0.39
Nup88-202ENSMUST00000108530 Rell2Q8BRJ3 303 aa12.63□□□□□ -0.39
Nup88-202ENSMUST00000108530 Cnot4Q8BT14 575 aaKnown RBP12.63□□□□□ -0.39
Nup88-202ENSMUST00000108530 Gpr84Q8CIM5 396 aa12.63□□□□□ -0.39
Nup88-202ENSMUST00000108530 Olfr1342Q8VFY3 315 aa12.63□□□□□ -0.39
Nup88-202ENSMUST00000108530 Kcne4Q9WTW3 170 aa12.63□□□□□ -0.39
Nup88-202ENSMUST00000108530 Dnajc13D4AFX7 2248 aaKnown RBP12.62□□□□□ -0.39
Nup88-202ENSMUST00000108530 Ighv5-4A0A075B5P9 117 aa12.62□□□□□ -0.39
Nup88-202ENSMUST00000108530 Trav15d-1-dv6d-1A0A075B624 124 aa12.62□□□□□ -0.39
Nup88-202ENSMUST00000108530 Gm21294A0A087WS79 222 aa12.62□□□□□ -0.39
Nup88-202ENSMUST00000108530 Tmem185aA2AF53 350 aa12.62□□□□□ -0.39
Nup88-202ENSMUST00000108530 Scgb1b30A2BH64 92 aa12.62□□□□□ -0.39
Nup88-202ENSMUST00000108530 SiglechB7ZMQ6 332 aa12.62□□□□□ -0.39
Nup88-202ENSMUST00000108530 P01658 132 aa12.62□□□□□ -0.39
Nup88-202ENSMUST00000108530 P04946 108 aa12.62□□□□□ -0.39
Nup88-202ENSMUST00000108530 Pdcd6P12815 191 aaKnown RBP12.62□□□□□ -0.39
Nup88-202ENSMUST00000108530 Foxa2P35583 459 aa12.62□□□□□ -0.39
Nup88-202ENSMUST00000108530 RhodP97348 210 aa12.62□□□□□ -0.39
Nup88-202ENSMUST00000108530 Tcf7Q00417 419 aa12.62□□□□□ -0.39
Nup88-202ENSMUST00000108530 St3gal2Q11204 350 aa12.62□□□□□ -0.39
Nup88-202ENSMUST00000108530 Gm12258Q5NC63 627 aa12.62□□□□□ -0.39
Nup88-202ENSMUST00000108530 Glra1Q64018 457 aa12.62□□□□□ -0.39
Nup88-202ENSMUST00000108530 Rnd1Q8BLR7 232 aa12.62□□□□□ -0.39
Nup88-202ENSMUST00000108530 Mob3aQ8BSU7 217 aa12.62□□□□□ -0.39
Nup88-202ENSMUST00000108530 Q8CDS7 251 aa12.62□□□□□ -0.39
Nup88-202ENSMUST00000108530 Rnf113a1Q8R3P8 341 aa12.62□□□□□ -0.39
Nup88-202ENSMUST00000108530 Osr2Q91ZD1 312 aa12.62□□□□□ -0.39
Nup88-202ENSMUST00000108530 Cx3cr1Q9Z0D9 354 aa12.62□□□□□ -0.39
Nup88-202ENSMUST00000108530 TectbO08524 329 aa12.62□□□□□ -0.39
Nup88-202ENSMUST00000108530 CtsbP10605 339 aa12.62□□□□□ -0.39
Nup88-202ENSMUST00000108530 DaoP18894 345 aa12.62□□□□□ -0.39
Nup88-202ENSMUST00000108530 Mpc1P63030 109 aa12.62□□□□□ -0.39
Nup88-202ENSMUST00000108530 Gng3P63216 75 aa12.62□□□□□ -0.39
Nup88-202ENSMUST00000108530 BidP70444 195 aa12.62□□□□□ -0.39
Nup88-202ENSMUST00000108530 Lhfpl5Q4KL25 219 aa12.62□□□□□ -0.39
Nup88-202ENSMUST00000108530 Kctd9Q80UN1 339 aa12.62□□□□□ -0.39
Nup88-202ENSMUST00000108530 H2-M10.4Q85ZW8 331 aa12.62□□□□□ -0.39
Nup88-202ENSMUST00000108530 Sec22aQ8BH47 307 aa12.62□□□□□ -0.39
Nup88-202ENSMUST00000108530 Ankrd46Q8BTZ5 228 aa12.62□□□□□ -0.39
Nup88-202ENSMUST00000108530 Vmn1r37Q8R2E4 302 aa12.62□□□□□ -0.39
Nup88-202ENSMUST00000108530 Znf281Q99LI5 893 aa12.62□□□□□ -0.39
Nup88-202ENSMUST00000108530 NbeaQ9EPN1 2936 aa12.62□□□□□ -0.39
Nup88-202ENSMUST00000108530 Med12lQ8BQM9 2157 aa12.61□□□□□ -0.39
Nup88-202ENSMUST00000108530 Htra4A2RT60 483 aa12.61□□□□□ -0.39
Nup88-202ENSMUST00000108530 Gfra3O35118 397 aa12.61□□□□□ -0.39
Nup88-202ENSMUST00000108530 Csf3P09920 208 aa12.61□□□□□ -0.39
Nup88-202ENSMUST00000108530 Lcn12Q6JVL5 193 aa12.61□□□□□ -0.39
Nup88-202ENSMUST00000108530 ArsjQ8BM89 598 aa12.61□□□□□ -0.39
Nup88-202ENSMUST00000108530 Actrt3Q8BXF8 369 aa12.61□□□□□ -0.39
Nup88-202ENSMUST00000108530 Tmem230Q8CIB6 120 aa12.61□□□□□ -0.39
Nup88-202ENSMUST00000108530 Esco2Q8CIB9 592 aaKnown RBP12.61□□□□□ -0.39
Nup88-202ENSMUST00000108530 Olfr507Q8VG13 316 aa12.61□□□□□ -0.39
Nup88-202ENSMUST00000108530 Olfr354Q8VGJ8 317 aa12.61□□□□□ -0.39
Nup88-202ENSMUST00000108530 Cavin3Q91VJ2 260 aa12.61□□□□□ -0.39
Nup88-202ENSMUST00000108530 Dyrk3Q922Y0 586 aa12.61□□□□□ -0.39
Nup88-202ENSMUST00000108530 Ssmem1Q9D9Y8 244 aa12.61□□□□□ -0.39
Nup88-202ENSMUST00000108530 Gm14597A2CFG5 200 aa12.61□□□□□ -0.39
Nup88-202ENSMUST00000108530 Olfr417F8VQB1 309 aa12.61□□□□□ -0.39
Nup88-202ENSMUST00000108530 P01804 111 aa12.61□□□□□ -0.39
Nup88-202ENSMUST00000108530 Fgf12P61329 243 aa12.61□□□□□ -0.39
Nup88-202ENSMUST00000108530 Gal3st4Q3V1B8 480 aa12.61□□□□□ -0.39
Nup88-202ENSMUST00000108530 Bloc1s3Q5U5M8 195 aa12.61□□□□□ -0.39
Nup88-202ENSMUST00000108530 Fam122bQ6NZE7 255 aa12.61□□□□□ -0.39
Nup88-202ENSMUST00000108530 Zfp729bQ80VN4 1045 aa12.61□□□□□ -0.39
Nup88-202ENSMUST00000108530 Alkbh6Q8K2U2 238 aa12.61□□□□□ -0.39
Nup88-202ENSMUST00000108530 Tmem267Q8VDR5 215 aa12.61□□□□□ -0.39
Nup88-202ENSMUST00000108530 Olfr339Q8VGK8 309 aa12.61□□□□□ -0.39
Nup88-202ENSMUST00000108530 Olfr1270Q8VGP3 304 aa12.61□□□□□ -0.39
Nup88-202ENSMUST00000108530 Mfsd4b2Q9D8I5 366 aa12.61□□□□□ -0.39
Nup88-202ENSMUST00000108530 Myo9bQ9QY06 2114 aa12.6□□□□□ -0.39
Nup88-202ENSMUST00000108530 Prr19B2RW88 366 aa12.6□□□□□ -0.39
Nup88-202ENSMUST00000108530 Olfr251E9Q891 316 aa12.6□□□□□ -0.39
Nup88-202ENSMUST00000108530 Zfp58P16372 489 aa12.6□□□□□ -0.39
Nup88-202ENSMUST00000108530 Mpv17P19258 176 aa12.6□□□□□ -0.39
Nup88-202ENSMUST00000108530 Htr5aP30966 357 aa12.6□□□□□ -0.39
Nup88-202ENSMUST00000108530 Ceacam10Q61400 265 aa12.6□□□□□ -0.39
Nup88-202ENSMUST00000108530 Tgfbr2Q62312 592 aa12.6□□□□□ -0.39
Nup88-202ENSMUST00000108530 Snrnp40Q6PE01 358 aa12.6□□□□□ -0.39
Nup88-202ENSMUST00000108530 Pramel5Q7TPY4 500 aa12.6□□□□□ -0.39
Nup88-202ENSMUST00000108530 Asphd2Q80VP9 343 aa12.6□□□□□ -0.39
Nup88-202ENSMUST00000108530 Actbl2Q8BFZ3 376 aa12.6□□□□□ -0.39
Nup88-202ENSMUST00000108530 Zfp87Q8K2A4 540 aa12.6□□□□□ -0.39
Nup88-202ENSMUST00000108530 Vmn1r235Q8R297 328 aa12.6□□□□□ -0.39
Nup88-202ENSMUST00000108530 Olfr490Q8VFD2 314 aa12.6□□□□□ -0.39
Nup88-202ENSMUST00000108530 Lcn8Q924P3 175 aa12.6□□□□□ -0.39
Nup88-202ENSMUST00000108530 Fam219aQ9D772 157 aa12.6□□□□□ -0.39
Nup88-202ENSMUST00000108530 Kcnip1Q9JJ57 227 aa12.6□□□□□ -0.39
Nup88-202ENSMUST00000108530 Ackr1Q9QUI6 334 aa12.6□□□□□ -0.39
Nup88-202ENSMUST00000108530 Smg1Q8BKX6 3658 aaKnown RBP12.6□□□□□ -0.39
Nup88-202ENSMUST00000108530 Gm17655A0A1B0GT13 591 aa12.59□□□□□ -0.39
Nup88-202ENSMUST00000108530 Arxes1C0HK79 180 aa12.59□□□□□ -0.39
Nup88-202ENSMUST00000108530 Arxes2C0HK80 180 aa12.59□□□□□ -0.39
Nup88-202ENSMUST00000108530 Olfr1410E9PYK6 323 aa12.59□□□□□ -0.39
Nup88-202ENSMUST00000108530 Vmn2r82G3UWA2 865 aa12.59□□□□□ -0.39
Nup88-202ENSMUST00000108530 BC117090L7N257 96 aa12.59□□□□□ -0.39
Nup88-202ENSMUST00000108530 Prrt1O35449 306 aa12.59□□□□□ -0.39
Nup88-202ENSMUST00000108530 Wdr1O88342 606 aaKnown RBP12.59□□□□□ -0.39
Nup88-202ENSMUST00000108530 GrprP21729 384 aa12.59□□□□□ -0.39
Nup88-202ENSMUST00000108530 CxadrP97792 365 aa12.59□□□□□ -0.39
Retrieved 100 of 22,080 RNA–protein pairs in 107.2 ms