RNA–Protein interactions for RNA: ENST00000409470.5

USP39-203, Transcript of ubiquitin specific peptidase 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP39, Length 2,034 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-203ENST00000409470 CCL21O00585 134 aa17.22■□□□□ 0.35
USP39-203ENST00000409470 GYPAP02724 150 aa17.22■□□□□ 0.35
USP39-203ENST00000409470 CD55P08174 381 aa17.22■□□□□ 0.35
USP39-203ENST00000409470 RPL30P62888 115 aaKnown RBP17.22■□□□□ 0.35
USP39-203ENST00000409470 CR1LQ2VPA4 569 aa17.22■□□□□ 0.35
USP39-203ENST00000409470 TGIF2LYQ8IUE0 185 aa17.22■□□□□ 0.35
USP39-203ENST00000409470 MARC2Q969Z3 335 aa17.22■□□□□ 0.35
USP39-203ENST00000409470 JPT1Q9UK76 154 aa17.22■□□□□ 0.35
USP39-203ENST00000409470 FAM90A27PA6NNH2 459 aa17.21■□□□□ 0.35
USP39-203ENST00000409470 OMGP23515 440 aa17.21■□□□□ 0.35
USP39-203ENST00000409470 EIF4EBP1Q13541 118 aaPredicted RBP17.21■□□□□ 0.35
USP39-203ENST00000409470 TMEM252Q8N6L7 170 aa17.21■□□□□ 0.35
USP39-203ENST00000409470 PLPPR2Q96GM1 343 aa17.21■□□□□ 0.35
USP39-203ENST00000409470 CCL13Q99616 98 aa17.21■□□□□ 0.35
USP39-203ENST00000409470 ZNF665Q9H7R5 613 aa17.21■□□□□ 0.35
USP39-203ENST00000409470 DCAF16Q9NXF7 216 aa17.21■□□□□ 0.35
USP39-203ENST00000409470 DYSFO75923 2080 aa17.21■□□□□ 0.35
USP39-203ENST00000409470 RAMP3O60896 148 aa17.21■□□□□ 0.35
USP39-203ENST00000409470 MED6O75586 246 aa17.21■□□□□ 0.35
USP39-203ENST00000409470 CLDN1O95832 211 aa17.21■□□□□ 0.35
USP39-203ENST00000409470 C1QTNF9P0C862 333 aa17.21■□□□□ 0.35
USP39-203ENST00000409470 MUC1P15941 1255 aaPredicted RBP17.21■□□□□ 0.35
USP39-203ENST00000409470 ZNF816Q0VGE8 651 aaPredicted RBP17.21■□□□□ 0.35
USP39-203ENST00000409470 Q3ZCU0 254 aa17.21■□□□□ 0.35
USP39-203ENST00000409470 NCMAPQ5T1S8 102 aa17.21■□□□□ 0.35
USP39-203ENST00000409470 DUX4L9Q6RFH8 374 aaPredicted RBP17.21■□□□□ 0.35
USP39-203ENST00000409470 FGFRL1Q8N441 504 aa17.21■□□□□ 0.35
USP39-203ENST00000409470 GAFA1Q96PS6 74 aa17.21■□□□□ 0.35
USP39-203ENST00000409470 EGLN1Q9GZT9 426 aa17.21■□□□□ 0.35
USP39-203ENST00000409470 CALYQ9NYX4 217 aa17.21■□□□□ 0.35
USP39-203ENST00000409470 RNF115Q9Y4L5 304 aa17.21■□□□□ 0.35
USP39-203ENST00000409470 TMEM50AO95807 157 aa17.2■□□□□ 0.34
USP39-203ENST00000409470 MORN2Q502X0 79 aa17.2■□□□□ 0.34
USP39-203ENST00000409470 SPAG16Q8N0X2 631 aa17.2■□□□□ 0.34
USP39-203ENST00000409470 SAT2Q96F10 170 aaPredicted RBP17.2■□□□□ 0.34
USP39-203ENST00000409470 ARV1Q9H2C2 271 aa17.2■□□□□ 0.34
USP39-203ENST00000409470 DSCAMO60469 2012 aa17.2■□□□□ 0.34
USP39-203ENST00000409470 SHISA9B4DS77 424 aa17.2■□□□□ 0.34
USP39-203ENST00000409470 GPR12P47775 334 aa17.2■□□□□ 0.34
USP39-203ENST00000409470 SULT1A2P50226 295 aa17.2■□□□□ 0.34
USP39-203ENST00000409470 CLINT1Q14677 625 aa17.2■□□□□ 0.34
USP39-203ENST00000409470 ZNF66Q6ZN08 573 aa17.2■□□□□ 0.34
USP39-203ENST00000409470 AGMATQ9BSE5 352 aa17.2■□□□□ 0.34
USP39-203ENST00000409470 NCOR1P1Q9H4R4 102 aa17.2■□□□□ 0.34
USP39-203ENST00000409470 SAP30LQ9HAJ7 183 aa17.2■□□□□ 0.34
USP39-203ENST00000409470 B8ZZF3 427 aa17.19■□□□□ 0.34
USP39-203ENST00000409470 F2RL2O00254 374 aa17.19■□□□□ 0.34
USP39-203ENST00000409470 YPEL1O60688 119 aa17.19■□□□□ 0.34
USP39-203ENST00000409470 CHRNB4P30926 498 aa17.19■□□□□ 0.34
USP39-203ENST00000409470 RPL23AP62750 156 aaKnown RBP17.19■□□□□ 0.34
USP39-203ENST00000409470 TEX36Q5VZQ5 186 aa17.19■□□□□ 0.34
USP39-203ENST00000409470 YPEL2Q96QA6 119 aa17.19■□□□□ 0.34
USP39-203ENST00000409470 HSD17B10Q99714 261 aaKnown RBP17.19■□□□□ 0.34
USP39-203ENST00000409470 GINS3Q9BRX5 216 aa17.19■□□□□ 0.34
USP39-203ENST00000409470 RAB9BQ9NP90 201 aa17.19■□□□□ 0.34
USP39-203ENST00000409470 MMP24Q9Y5R2 645 aa17.19■□□□□ 0.34
USP39-203ENST00000409470 POLEQ07864 2286 aa17.18■□□□□ 0.34
USP39-203ENST00000409470 TRGV10A0A0A0MS01 117 aa17.18■□□□□ 0.34
USP39-203ENST00000409470 C17orf98A8MV24 154 aa17.18■□□□□ 0.34
USP39-203ENST00000409470 KIAA1324LA8MWY0 1029 aaPredicted RBP17.18■□□□□ 0.34
USP39-203ENST00000409470 E7EQL1 145 aa17.18■□□□□ 0.34
USP39-203ENST00000409470 CST7O76096 145 aa17.18■□□□□ 0.34
USP39-203ENST00000409470 FAM209AQ5JX71 171 aa17.18■□□□□ 0.34
USP39-203ENST00000409470 ZNF788Q6ZQV5 615 aa17.18■□□□□ 0.34
USP39-203ENST00000409470 FAM216BQ8N7L0 139 aa17.18■□□□□ 0.34
USP39-203ENST00000409470 NEUROG1Q92886 237 aa17.18■□□□□ 0.34
USP39-203ENST00000409470 SMIM8Q96KF7 97 aa17.18■□□□□ 0.34
USP39-203ENST00000409470 RAB40CQ96S21 281 aa17.18■□□□□ 0.34
USP39-203ENST00000409470 FAM234AQ9H0X4 552 aa17.18■□□□□ 0.34
USP39-203ENST00000409470 COQ3Q9NZJ6 369 aa17.18■□□□□ 0.34
USP39-203ENST00000409470 NDRG3Q9UGV2 375 aa17.18■□□□□ 0.34
USP39-203ENST00000409470 RAI1Q7Z5J4 1906 aaPredicted RBP17.18■□□□□ 0.34
USP39-203ENST00000409470 ATG12O94817 140 aa17.18■□□□□ 0.34
USP39-203ENST00000409470 KRASP01116 189 aa17.18■□□□□ 0.34
USP39-203ENST00000409470 CD3EP07766 207 aa17.18■□□□□ 0.34
USP39-203ENST00000409470 PAX9P55771 341 aa17.18■□□□□ 0.34
USP39-203ENST00000409470 BAXQ07812 192 aa17.18■□□□□ 0.34
USP39-203ENST00000409470 ZNF266Q14584 549 aa17.18■□□□□ 0.34
USP39-203ENST00000409470 PXDC1Q5TGL8 231 aa17.18■□□□□ 0.34
USP39-203ENST00000409470 DMRTC2Q8IXT2 367 aaPredicted RBP17.18■□□□□ 0.34
USP39-203ENST00000409470 TCTEX1D1Q8N7M0 179 aa17.18■□□□□ 0.34
USP39-203ENST00000409470 HSD17B11Q8NBQ5 300 aa17.18■□□□□ 0.34
USP39-203ENST00000409470 HRH4Q9H3N8 390 aa17.18■□□□□ 0.34
USP39-203ENST00000409470 DYNLRB1Q9NP97 96 aa17.18■□□□□ 0.34
USP39-203ENST00000409470 FAM212BQ9NTI7 297 aaPredicted RBP17.18■□□□□ 0.34
USP39-203ENST00000409470 ROS1P08922 2347 aa17.17■□□□□ 0.34
USP39-203ENST00000409470 RAB19A4D1S5 217 aa17.17■□□□□ 0.34
USP39-203ENST00000409470 NKX6-3A6NJ46 265 aa17.17■□□□□ 0.34
USP39-203ENST00000409470 SYNGR2O43760 224 aa17.17■□□□□ 0.34
USP39-203ENST00000409470 S1PR2O95136 353 aa17.17■□□□□ 0.34
USP39-203ENST00000409470 IGHV3-7P01780 117 aa17.17■□□□□ 0.34
USP39-203ENST00000409470 SEC11BP0C7V7 166 aa17.17■□□□□ 0.34
USP39-203ENST00000409470 G6PCP35575 357 aa17.17■□□□□ 0.34
USP39-203ENST00000409470 LOXL3P58215 753 aa17.17■□□□□ 0.34
USP39-203ENST00000409470 SWI5Q1ZZU3 235 aa17.17■□□□□ 0.34
USP39-203ENST00000409470 TUSC1Q2TAM9 212 aa17.17■□□□□ 0.34
USP39-203ENST00000409470 TMEM217Q8N7C4 229 aa17.17■□□□□ 0.34
USP39-203ENST00000409470 OR5C1Q8NGR4 320 aa17.17■□□□□ 0.34
USP39-203ENST00000409470 LINC01560Q8TB33 94 aa17.17■□□□□ 0.34
USP39-203ENST00000409470 RNASE6Q93091 150 aaKnown RBP17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms