RNA–Protein interactions for RNA: ENST00000303406.4

HOXC4-201, Transcript of homeobox C4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC4, Length 1,524 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4-201ENST00000303406 ZNF16P17020 682 aaPredicted RBP16.15■□□□□ 0.18
HOXC4-201ENST00000303406 PAX9P55771 341 aa16.15■□□□□ 0.18
HOXC4-201ENST00000303406 TAS2R30P59541 319 aa16.15■□□□□ 0.18
HOXC4-201ENST00000303406 GAFA1Q96PS6 74 aa16.15■□□□□ 0.18
HOXC4-201ENST00000303406 RNF150Q9ULK6 438 aa16.15■□□□□ 0.18
HOXC4-201ENST00000303406 TOR1AO14656 332 aa16.14■□□□□ 0.18
HOXC4-201ENST00000303406 MORN2Q502X0 79 aa16.14■□□□□ 0.18
HOXC4-201ENST00000303406 Q6ZRM9 215 aa16.14■□□□□ 0.18
HOXC4-201ENST00000303406 FGFRL1Q8N441 504 aa16.14■□□□□ 0.18
HOXC4-201ENST00000303406 ZNRF1Q8ND25 227 aa16.14■□□□□ 0.18
HOXC4-201ENST00000303406 CD300LFQ8TDQ1 290 aa16.14■□□□□ 0.18
HOXC4-201ENST00000303406 DCTN5Q9BTE1 182 aa16.14■□□□□ 0.18
HOXC4-201ENST00000303406 EGLN1Q9GZT9 426 aa16.14■□□□□ 0.18
HOXC4-201ENST00000303406 MAGT1Q9H0U3 335 aa16.14■□□□□ 0.18
HOXC4-201ENST00000303406 CALYQ9NYX4 217 aa16.14■□□□□ 0.18
HOXC4-201ENST00000303406 PTPRQQ9UMZ3 2332 aa16.14■□□□□ 0.17
HOXC4-201ENST00000303406 SIGLEC5O15389 551 aa16.14■□□□□ 0.17
HOXC4-201ENST00000303406 TMEM50AO95807 157 aa16.14■□□□□ 0.17
HOXC4-201ENST00000303406 CLDN1O95832 211 aa16.14■□□□□ 0.17
HOXC4-201ENST00000303406 EPHA1P21709 976 aa16.14■□□□□ 0.17
HOXC4-201ENST00000303406 LOXL3P58215 753 aa16.14■□□□□ 0.17
HOXC4-201ENST00000303406 RPL30P62888 115 aaKnown RBP16.14■□□□□ 0.17
HOXC4-201ENST00000303406 PJVKQ0ZLH3 352 aa16.14■□□□□ 0.17
HOXC4-201ENST00000303406 RFESDQ8TAC1 157 aa16.14■□□□□ 0.17
HOXC4-201ENST00000303406 CORO2AQ92828 525 aa16.14■□□□□ 0.17
HOXC4-201ENST00000303406 LINC00574Q9H8X3 128 aa16.14■□□□□ 0.17
HOXC4-201ENST00000303406 STRAPQ9Y3F4 350 aaKnown RBP16.14■□□□□ 0.17
HOXC4-201ENST00000303406 CFAP47Q6ZTR5 3102 aa16.13■□□□□ 0.17
HOXC4-201ENST00000303406 SHISA9B4DS77 424 aa16.13■□□□□ 0.17
HOXC4-201ENST00000303406 LGALS8O00214 317 aa16.13■□□□□ 0.17
HOXC4-201ENST00000303406 TXNL1O43396 289 aa16.13■□□□□ 0.17
HOXC4-201ENST00000303406 SYNGR2O43760 224 aa16.13■□□□□ 0.17
HOXC4-201ENST00000303406 MED6O75586 246 aa16.13■□□□□ 0.17
HOXC4-201ENST00000303406 CRYZL1O95825 349 aa16.13■□□□□ 0.17
HOXC4-201ENST00000303406 CYB5R3P00387 301 aaPredicted RBP16.13■□□□□ 0.17
HOXC4-201ENST00000303406 SWI5Q1ZZU3 235 aa16.13■□□□□ 0.17
HOXC4-201ENST00000303406 KIAA2026Q5HYC2 2103 aa16.13■□□□□ 0.17
HOXC4-201ENST00000303406 PXDC1Q5TGL8 231 aa16.13■□□□□ 0.17
HOXC4-201ENST00000303406 ODF3L1Q8IXM7 274 aa16.13■□□□□ 0.17
HOXC4-201ENST00000303406 C1orf87Q8N0U7 546 aa16.13■□□□□ 0.17
HOXC4-201ENST00000303406 ZNF808Q8N4W9 903 aaPredicted RBP16.13■□□□□ 0.17
HOXC4-201ENST00000303406 KDF1Q8NAX2 398 aaPredicted RBP16.13■□□□□ 0.17
HOXC4-201ENST00000303406 LYPD6BQ8NI32 183 aa16.13■□□□□ 0.17
HOXC4-201ENST00000303406 TCTEX1D2Q8WW35 142 aa16.13■□□□□ 0.17
HOXC4-201ENST00000303406 RNASE6Q93091 150 aaKnown RBP16.13■□□□□ 0.17
HOXC4-201ENST00000303406 PLA2G2EQ9NZK7 142 aa16.13■□□□□ 0.17
HOXC4-201ENST00000303406 GNG12Q9UBI6 72 aa16.13■□□□□ 0.17
HOXC4-201ENST00000303406 PSG11Q9UQ72 335 aa16.13■□□□□ 0.17
HOXC4-201ENST00000303406 IGHV3-43A0A0B4J1X8 118 aa16.12■□□□□ 0.17
HOXC4-201ENST00000303406 NKX6-3A6NJ46 265 aa16.12■□□□□ 0.17
HOXC4-201ENST00000303406 RAB29O14966 203 aa16.12■□□□□ 0.17
HOXC4-201ENST00000303406 FBXO24O75426 580 aa16.12■□□□□ 0.17
HOXC4-201ENST00000303406 CLDN14O95500 239 aa16.12■□□□□ 0.17
HOXC4-201ENST00000303406 DANCRP0C864 163 aa16.12■□□□□ 0.17
HOXC4-201ENST00000303406 IGHV3-43DP0DP04 118 aa16.12■□□□□ 0.17
HOXC4-201ENST00000303406 M6PRP20645 277 aa16.12■□□□□ 0.17
HOXC4-201ENST00000303406 CHRNB4P30926 498 aa16.12■□□□□ 0.17
HOXC4-201ENST00000303406 RAB7AP51149 207 aa16.12■□□□□ 0.17
HOXC4-201ENST00000303406 ARHGDIBP52566 201 aa16.12■□□□□ 0.17
HOXC4-201ENST00000303406 F2RL1P55085 397 aa16.12■□□□□ 0.17
HOXC4-201ENST00000303406 EDDM3BP56851 147 aa16.12■□□□□ 0.17
HOXC4-201ENST00000303406 TLE1Q04724 770 aa16.12■□□□□ 0.17
HOXC4-201ENST00000303406 EFNB3Q15768 340 aa16.12■□□□□ 0.17
HOXC4-201ENST00000303406 TUSC1Q2TAM9 212 aa16.12■□□□□ 0.17
HOXC4-201ENST00000303406 BTNL8Q6UX41 500 aa16.12■□□□□ 0.17
HOXC4-201ENST00000303406 CLEC9AQ6UXN8 241 aa16.12■□□□□ 0.17
HOXC4-201ENST00000303406 STX12Q86Y82 276 aa16.12■□□□□ 0.17
HOXC4-201ENST00000303406 SPAG16Q8N0X2 631 aa16.12■□□□□ 0.17
HOXC4-201ENST00000303406 PRRC2CQ9Y520 2896 aaKnown RBP16.12■□□□□ 0.17
HOXC4-201ENST00000303406 CADP27708 2225 aa16.12■□□□□ 0.17
HOXC4-201ENST00000303406 TRGV10A0A0A0MS01 117 aa16.11■□□□□ 0.17
HOXC4-201ENST00000303406 TRAV38-1A0A0B4J264 116 aa16.11■□□□□ 0.17
HOXC4-201ENST00000303406 KBTBD11-OT1A0A1B0GTJ5 212 aa16.11■□□□□ 0.17
HOXC4-201ENST00000303406 ZNF729A6NN14 1252 aaPredicted RBP16.11■□□□□ 0.17
HOXC4-201ENST00000303406 ST8SIA5O15466 376 aa16.11■□□□□ 0.17
HOXC4-201ENST00000303406 DFFBO76075 338 aa16.11■□□□□ 0.17
HOXC4-201ENST00000303406 GPR12P47775 334 aa16.11■□□□□ 0.17
HOXC4-201ENST00000303406 SULT1A1P50225 295 aa16.11■□□□□ 0.17
HOXC4-201ENST00000303406 C17orf58Q2M2W7 97 aa16.11■□□□□ 0.17
HOXC4-201ENST00000303406 FAM201AQ5SY85 155 aa16.11■□□□□ 0.17
HOXC4-201ENST00000303406 FAM53AQ6NSI3 398 aaPredicted RBP16.11■□□□□ 0.17
HOXC4-201ENST00000303406 ADAM5Q6NVV9 412 aa16.11■□□□□ 0.17
HOXC4-201ENST00000303406 DMRTC2Q8IXT2 367 aaPredicted RBP16.11■□□□□ 0.17
HOXC4-201ENST00000303406 ZNF295-AS1Q8N0V1 137 aa16.11■□□□□ 0.17
HOXC4-201ENST00000303406 ZNF436-AS1Q8NC38 126 aaPredicted RBP16.11■□□□□ 0.17
HOXC4-201ENST00000303406 TSNAXQ99598 290 aaKnown RBP16.11■□□□□ 0.17
HOXC4-201ENST00000303406 GFOD1Q9NXC2 390 aa16.11■□□□□ 0.17
HOXC4-201ENST00000303406 CLN8Q9UBY8 286 aa16.11■□□□□ 0.17
HOXC4-201ENST00000303406 C17orf98A8MV24 154 aa16.1■□□□□ 0.17
HOXC4-201ENST00000303406 TRIM77I1YAP6 450 aa16.1■□□□□ 0.17
HOXC4-201ENST00000303406 RBFOX2O43251 390 aaKnown RBP eCLIP16.1■□□□□ 0.17
HOXC4-201ENST00000303406 DUTP33316 252 aaKnown RBP16.1■□□□□ 0.17
HOXC4-201ENST00000303406 BRWD1-AS2P59051 145 aa16.1■□□□□ 0.17
HOXC4-201ENST00000303406 Q3ZCU0 254 aa16.1■□□□□ 0.17
HOXC4-201ENST00000303406 MIDNQ504T8 468 aa16.1■□□□□ 0.17
HOXC4-201ENST00000303406 COMMD1Q8N668 190 aa16.1■□□□□ 0.17
HOXC4-201ENST00000303406 BPIFCQ8NFQ6 507 aa16.1■□□□□ 0.17
HOXC4-201ENST00000303406 NARFLQ9H6Q4 476 aa16.1■□□□□ 0.17
HOXC4-201ENST00000303406 HSPB7Q9UBY9 170 aa16.1■□□□□ 0.17
HOXC4-201ENST00000303406 BSNQ9UPA5 3926 aa16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms