RNA–Protein interactions for RNA: ENSMUST00000108530.1

Nup88-202, Transcript of Nuclear pore complex protein Nup88, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Nup88, Length 2,389 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88-202ENSMUST00000108530 Gm10375L7N286 184 aa12.65□□□□□ -0.38
Nup88-202ENSMUST00000108530 RrasP10833 218 aa12.65□□□□□ -0.38
Nup88-202ENSMUST00000108530 LplP11152 474 aa12.65□□□□□ -0.38
Nup88-202ENSMUST00000108530 Bdkrb2P32299 392 aa12.65□□□□□ -0.38
Nup88-202ENSMUST00000108530 Rab3cP62823 227 aa12.65□□□□□ -0.38
Nup88-202ENSMUST00000108530 SelenopP70274 380 aa12.65□□□□□ -0.38
Nup88-202ENSMUST00000108530 Gal3st2cQ3ULK5 396 aa12.65□□□□□ -0.38
Nup88-202ENSMUST00000108530 Tff3Q62395 81 aa12.65□□□□□ -0.38
Nup88-202ENSMUST00000108530 Btn1a1Q62556 524 aa12.65□□□□□ -0.38
Nup88-202ENSMUST00000108530 Nup62Q63850 526 aa12.65□□□□□ -0.38
Nup88-202ENSMUST00000108530 PnkdQ69ZP3 385 aa12.65□□□□□ -0.38
Nup88-202ENSMUST00000108530 Gm21093Q6GQS8 569 aa12.65□□□□□ -0.38
Nup88-202ENSMUST00000108530 1700001F09RikQ9DAR5 184 aa12.65□□□□□ -0.38
Nup88-202ENSMUST00000108530 Wdr31Q9JHB4 367 aa12.65□□□□□ -0.38
Nup88-202ENSMUST00000108530 Ntn3Q9R1A3 580 aa12.65□□□□□ -0.38
Nup88-202ENSMUST00000108530 Plp2Q9R1Q7 152 aa12.65□□□□□ -0.38
Nup88-202ENSMUST00000108530 Obp1bA2AEP0 171 aa12.65□□□□□ -0.38
Nup88-202ENSMUST00000108530 Gm14743A2BHD2 171 aa12.65□□□□□ -0.38
Nup88-202ENSMUST00000108530 Rbm24D3Z4I3 236 aaKnown RBP12.65□□□□□ -0.38
Nup88-202ENSMUST00000108530 Vmn1r173E9Q8V7 313 aa12.65□□□□□ -0.38
Nup88-202ENSMUST00000108530 Ifna9P09235 190 aa12.65□□□□□ -0.38
Nup88-202ENSMUST00000108530 AregP31955 248 aa12.65□□□□□ -0.38
Nup88-202ENSMUST00000108530 Ccr8P56484 353 aa12.65□□□□□ -0.38
Nup88-202ENSMUST00000108530 Zfp772Q3UQL6 416 aa12.65□□□□□ -0.38
Nup88-202ENSMUST00000108530 Rnase12Q5GAM8 145 aa12.65□□□□□ -0.38
Nup88-202ENSMUST00000108530 Trav6-2Q5R1I4 113 aa12.65□□□□□ -0.38
Nup88-202ENSMUST00000108530 Pld6Q5SWZ9 221 aa12.65□□□□□ -0.38
Nup88-202ENSMUST00000108530 Klk1b24Q61754 263 aa12.65□□□□□ -0.38
Nup88-202ENSMUST00000108530 Vamp1Q62442 118 aa12.65□□□□□ -0.38
Nup88-202ENSMUST00000108530 Tbr1Q64336 681 aa12.65□□□□□ -0.38
Nup88-202ENSMUST00000108530 Zfp455Q7M6X9 461 aa12.65□□□□□ -0.38
Nup88-202ENSMUST00000108530 Olfr453Q7TRV7 317 aa12.65□□□□□ -0.38
Nup88-202ENSMUST00000108530 Lhfpl2Q8BGA2 222 aa12.65□□□□□ -0.38
Nup88-202ENSMUST00000108530 Rab14Q91V41 215 aaKnown RBP12.65□□□□□ -0.38
Nup88-202ENSMUST00000108530 Sfxn3Q91V61 321 aa12.65□□□□□ -0.38
Nup88-202ENSMUST00000108530 Prss28Q924N9 274 aa12.65□□□□□ -0.38
Nup88-202ENSMUST00000108530 CsprsQ99388 208 aa12.65□□□□□ -0.38
Nup88-202ENSMUST00000108530 Abhd12Q99LR1 398 aaKnown RBP12.65□□□□□ -0.38
Nup88-202ENSMUST00000108530 Arl13aQ9D416 372 aa12.65□□□□□ -0.38
Nup88-202ENSMUST00000108530 Ighv1-34A0A075B5V2 117 aa12.64□□□□□ -0.39
Nup88-202ENSMUST00000108530 Olfr1335B2RVY8 335 aa12.64□□□□□ -0.39
Nup88-202ENSMUST00000108530 Gm5799E9Q2M1 201 aa12.64□□□□□ -0.39
Nup88-202ENSMUST00000108530 Lipo5F6QKH6 233 aa12.64□□□□□ -0.39
Nup88-202ENSMUST00000108530 Cd46O88174 365 aa12.64□□□□□ -0.39
Nup88-202ENSMUST00000108530 P18532 116 aa12.64□□□□□ -0.39
Nup88-202ENSMUST00000108530 P58686 83 aa12.64□□□□□ -0.39
Nup88-202ENSMUST00000108530 Vmn1r236Q05A06 334 aa12.64□□□□□ -0.39
Nup88-202ENSMUST00000108530 Lrrc52Q5M8M9 314 aa12.64□□□□□ -0.39
Nup88-202ENSMUST00000108530 Sox19Q62249 55 aa12.64□□□□□ -0.39
Nup88-202ENSMUST00000108530 Mgat4aQ812G0 535 aa12.64□□□□□ -0.39
Nup88-202ENSMUST00000108530 B3gnt8Q8R3I9 389 aa12.64□□□□□ -0.39
Nup88-202ENSMUST00000108530 Olfr1330Q8VEY6 315 aa12.64□□□□□ -0.39
Nup88-202ENSMUST00000108530 Olfr52Q8VFL0 319 aa12.64□□□□□ -0.39
Nup88-202ENSMUST00000108530 B3galnt1Q920V1 331 aa12.64□□□□□ -0.39
Nup88-202ENSMUST00000108530 Slc25a22Q9D6M3 323 aa12.64□□□□□ -0.39
Nup88-202ENSMUST00000108530 Psma1Q9R1P4 263 aa12.64□□□□□ -0.39
Nup88-202ENSMUST00000108530 Angpt4Q9WVH6 509 aa12.64□□□□□ -0.39
Nup88-202ENSMUST00000108530 Msl3l2G3X992 371 aa12.64□□□□□ -0.39
Nup88-202ENSMUST00000108530 OpcmlG5E8G3 345 aa12.64□□□□□ -0.39
Nup88-202ENSMUST00000108530 PhyhO35386 338 aa12.64□□□□□ -0.39
Nup88-202ENSMUST00000108530 Cd1d1P11609 336 aa12.64□□□□□ -0.39
Nup88-202ENSMUST00000108530 Cd1d2P11610 336 aa12.64□□□□□ -0.39
Nup88-202ENSMUST00000108530 Scd2P13011 358 aa12.64□□□□□ -0.39
Nup88-202ENSMUST00000108530 Spi1P17433 272 aa12.64□□□□□ -0.39
Nup88-202ENSMUST00000108530 MpzP27573 248 aa12.64□□□□□ -0.39
Nup88-202ENSMUST00000108530 Pax8Q00288 457 aa12.64□□□□□ -0.39
Nup88-202ENSMUST00000108530 Rpusd3Q14AI6 344 aa12.64□□□□□ -0.39
Nup88-202ENSMUST00000108530 Hand1Q64279 216 aa12.64□□□□□ -0.39
Nup88-202ENSMUST00000108530 Zfp677Q6PEP4 634 aa12.64□□□□□ -0.39
Nup88-202ENSMUST00000108530 C330021F23RikQ8C7T0 141 aa12.64□□□□□ -0.39
Nup88-202ENSMUST00000108530 Cuedc1Q8R3V6 388 aa12.64□□□□□ -0.39
Nup88-202ENSMUST00000108530 Mic13Q8R404 119 aaKnown RBP12.64□□□□□ -0.39
Nup88-202ENSMUST00000108530 Olfr360Q8VFP3 317 aa12.64□□□□□ -0.39
Nup88-202ENSMUST00000108530 Olfr1151Q8VFQ8 308 aa12.64□□□□□ -0.39
Nup88-202ENSMUST00000108530 Atp5sQ9CRA7 200 aa12.64□□□□□ -0.39
Nup88-202ENSMUST00000108530 Gpx8Q9D7B7 209 aa12.64□□□□□ -0.39
Nup88-202ENSMUST00000108530 Ndufa9Q9DC69 377 aaKnown RBP12.64□□□□□ -0.39
Nup88-202ENSMUST00000108530 Hs3st3b1Q9QZS6 390 aa12.64□□□□□ -0.39
Nup88-202ENSMUST00000108530 Suclg1Q9WUM5 346 aaKnown RBP12.64□□□□□ -0.39
Nup88-202ENSMUST00000108530 B3GNT2Q9Z222 397 aa12.64□□□□□ -0.39
Nup88-202ENSMUST00000108530 Sptbn2Q68FG2 2388 aa12.63□□□□□ -0.39
Nup88-202ENSMUST00000108530 Ntsr1O88319 424 aa12.63□□□□□ -0.39
Nup88-202ENSMUST00000108530 Lbx1P52955 282 aa12.63□□□□□ -0.39
Nup88-202ENSMUST00000108530 Vax1Q2NKI2 338 aa12.63□□□□□ -0.39
Nup88-202ENSMUST00000108530 Olfr324Q5NCC7 333 aa12.63□□□□□ -0.39
Nup88-202ENSMUST00000108530 Klf2Q60843 354 aaKnown RBP12.63□□□□□ -0.39
Nup88-202ENSMUST00000108530 Dmrta1Q8CFG4 490 aa12.63□□□□□ -0.39
Nup88-202ENSMUST00000108530 Vrk3Q8K3G5 453 aa12.63□□□□□ -0.39
Nup88-202ENSMUST00000108530 Ms4a4dQ99N05 225 aa12.63□□□□□ -0.39
Nup88-202ENSMUST00000108530 Vmn1r138D3YTY2 306 aa12.63□□□□□ -0.39
Nup88-202ENSMUST00000108530 Gm8693E9PW18 306 aa12.63□□□□□ -0.39
Nup88-202ENSMUST00000108530 Olfr69E9Q7C5 316 aa12.63□□□□□ -0.39
Nup88-202ENSMUST00000108530 Gm4498K9J7G4 306 aa12.63□□□□□ -0.39
Nup88-202ENSMUST00000108530 Vmn1r118L7N273 306 aa12.63□□□□□ -0.39
Nup88-202ENSMUST00000108530 Evx1P23683 416 aa12.63□□□□□ -0.39
Nup88-202ENSMUST00000108530 Htr2aP35363 471 aa12.63□□□□□ -0.39
Nup88-202ENSMUST00000108530 ArsbP50429 534 aa12.63□□□□□ -0.39
Nup88-202ENSMUST00000108530 Fabp2P55050 132 aa12.63□□□□□ -0.39
Nup88-202ENSMUST00000108530 Rtp3Q5QGU6 474 aa12.63□□□□□ -0.39
Nup88-202ENSMUST00000108530 Cbx5Q61686 191 aaKnown RBP12.63□□□□□ -0.39
Retrieved 100 of 22,080 RNA–protein pairs in 97 ms