RNA–Protein interactions for RNA: ENST00000611132.4

VPS36-207, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 1 (best) BASIC

Gene VPS36, Length 4,607 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-207ENST00000611132 NDUFB4O95168 129 aa12.64□□□□□ -0.39
VPS36-207ENST00000611132 LIFP15018 202 aa12.64□□□□□ -0.39
VPS36-207ENST00000611132 TCL1AP56279 114 aa12.64□□□□□ -0.39
VPS36-207ENST00000611132 WDR74Q6RFH5 385 aaPredicted RBP12.64□□□□□ -0.39
VPS36-207ENST00000611132 TIPARPQ7Z3E1 657 aaKnown RBP12.64□□□□□ -0.39
VPS36-207ENST00000611132 ZNF501Q96CX3 271 aaPredicted RBP12.64□□□□□ -0.39
VPS36-207ENST00000611132 LRFN3Q9BTN0 628 aa12.64□□□□□ -0.39
VPS36-207ENST00000611132 ABHD14AQ9BUJ0 271 aa12.64□□□□□ -0.39
VPS36-207ENST00000611132 COMMD5Q9GZQ3 224 aa12.64□□□□□ -0.39
VPS36-207ENST00000611132 SCN8AQ9UQD0 1980 aa12.64□□□□□ -0.39
VPS36-207ENST00000611132 GALR2O43603 387 aaPredicted RBP12.64□□□□□ -0.39
VPS36-207ENST00000611132 NPIPB7O75200 414 aa12.64□□□□□ -0.39
VPS36-207ENST00000611132 C6orf15Q6UXA7 325 aaPredicted RBP12.64□□□□□ -0.39
VPS36-207ENST00000611132 CXorf67Q86X51 503 aaPredicted RBP12.64□□□□□ -0.39
VPS36-207ENST00000611132 FAM89BQ8N5H3 189 aa12.64□□□□□ -0.39
VPS36-207ENST00000611132 WDR61Q9GZS3 305 aaKnown RBP12.64□□□□□ -0.39
VPS36-207ENST00000611132 MDC1Q14676 2089 aaKnown RBP12.64□□□□□ -0.39
VPS36-207ENST00000611132 MPLP40238 635 aa12.63□□□□□ -0.39
VPS36-207ENST00000611132 BTNL3Q6UXE8 466 aa12.63□□□□□ -0.39
VPS36-207ENST00000611132 SMIM15Q7Z3B0 74 aa12.63□□□□□ -0.39
VPS36-207ENST00000611132 LINC00596Q86U02 117 aa12.63□□□□□ -0.39
VPS36-207ENST00000611132 ZBTB34Q8NCN2 500 aa12.63□□□□□ -0.39
VPS36-207ENST00000611132 MRGPRDQ8TDS7 321 aa12.63□□□□□ -0.39
VPS36-207ENST00000611132 NDUFAF3Q9BU61 184 aa12.63□□□□□ -0.39
VPS36-207ENST00000611132 J3QT63 122 aa12.63□□□□□ -0.39
VPS36-207ENST00000611132 NDUFS6O75380 124 aaKnown RBP12.63□□□□□ -0.39
VPS36-207ENST00000611132 ERHP84090 104 aaKnown RBP12.63□□□□□ -0.39
VPS36-207ENST00000611132 RTL8BQ17RB0 113 aa12.63□□□□□ -0.39
VPS36-207ENST00000611132 PYY3Q5JQD4 70 aa12.63□□□□□ -0.39
VPS36-207ENST00000611132 WFIKKN1Q96NZ8 548 aa12.63□□□□□ -0.39
VPS36-207ENST00000611132 IGHV3-43A0A0B4J1X8 118 aa12.63□□□□□ -0.39
VPS36-207ENST00000611132 IGHV3-43DP0DP04 118 aa12.63□□□□□ -0.39
VPS36-207ENST00000611132 BPIFB3P59826 476 aa12.63□□□□□ -0.39
VPS36-207ENST00000611132 SCGB2A2Q13296 93 aa12.63□□□□□ -0.39
VPS36-207ENST00000611132 ICAM4Q14773 271 aa12.63□□□□□ -0.39
VPS36-207ENST00000611132 MST1LQ2TV78 715 aa12.63□□□□□ -0.39
VPS36-207ENST00000611132 ABLIM2Q6H8Q1 611 aa12.63□□□□□ -0.39
VPS36-207ENST00000611132 R3HDM4Q96D70 268 aa12.63□□□□□ -0.39
VPS36-207ENST00000611132 COL10A1Q03692 680 aa12.63□□□□□ -0.39
VPS36-207ENST00000611132 IL11RAQ14626 422 aa12.63□□□□□ -0.39
VPS36-207ENST00000611132 ZNF124Q15973 351 aa12.63□□□□□ -0.39
VPS36-207ENST00000611132 IZUMO4Q1ZYL8 232 aa12.63□□□□□ -0.39
VPS36-207ENST00000611132 CYP2G1PQ6ZSU1 146 aa12.63□□□□□ -0.39
VPS36-207ENST00000611132 WFDC1Q9HC57 220 aa12.63□□□□□ -0.39
VPS36-207ENST00000611132 BRS3P32247 399 aa12.62□□□□□ -0.39
VPS36-207ENST00000611132 CCL20P78556 96 aa12.62□□□□□ -0.39
VPS36-207ENST00000611132 SSMEM1Q8WWF3 244 aa12.62□□□□□ -0.39
VPS36-207ENST00000611132 POM121L2Q96KW2 1035 aa12.62□□□□□ -0.39
VPS36-207ENST00000611132 DEFB127Q9H1M4 99 aa12.62□□□□□ -0.39
VPS36-207ENST00000611132 SDF2L1Q9HCN8 221 aa12.62□□□□□ -0.39
VPS36-207ENST00000611132 SLC22A20A6NK97 555 aa12.62□□□□□ -0.39
VPS36-207ENST00000611132 CXorf1O96002 111 aa12.62□□□□□ -0.39
VPS36-207ENST00000611132 C11orf42Q8N5U0 333 aa12.62□□□□□ -0.39
VPS36-207ENST00000611132 ZNF488Q96MN9 340 aa12.62□□□□□ -0.39
VPS36-207ENST00000611132 RTN4RQ9BZR6 473 aa12.62□□□□□ -0.39
VPS36-207ENST00000611132 TANC1Q9C0D5 1861 aa12.62□□□□□ -0.39
VPS36-207ENST00000611132 SDK2Q58EX2 2172 aa12.62□□□□□ -0.39
VPS36-207ENST00000611132 IGKV1-9A0A0C4DH69 117 aa12.62□□□□□ -0.39
VPS36-207ENST00000611132 COX7A2P2O60397 106 aa12.62□□□□□ -0.39
VPS36-207ENST00000611132 ZNF718Q3SXZ3 478 aa12.62□□□□□ -0.39
VPS36-207ENST00000611132 TMEM178AQ8NBL3 297 aa12.62□□□□□ -0.39
VPS36-207ENST00000611132 FER1L6-AS2Q96M78 137 aa12.62□□□□□ -0.39
VPS36-207ENST00000611132 TMEM167BQ9NRX6 74 aa12.62□□□□□ -0.39
VPS36-207ENST00000611132 CACNA1DQ01668 2161 aa12.62□□□□□ -0.39
VPS36-207ENST00000611132 SIAH2O43255 324 aa12.61□□□□□ -0.39
VPS36-207ENST00000611132 ENSAO43768 121 aaKnown RBP12.61□□□□□ -0.39
VPS36-207ENST00000611132 S100A7AQ86SG5 101 aa12.61□□□□□ -0.39
VPS36-207ENST00000611132 SHISA5Q8N114 240 aa12.61□□□□□ -0.39
VPS36-207ENST00000611132 GMPPAQ96IJ6 420 aaPredicted RBP12.61□□□□□ -0.39
VPS36-207ENST00000611132 ATG101Q9BSB4 218 aa12.61□□□□□ -0.39
VPS36-207ENST00000611132 KLF13Q9Y2Y9 288 aaPredicted RBP12.61□□□□□ -0.39
VPS36-207ENST00000611132 CYB5R2Q6BCY4 276 aa12.61□□□□□ -0.39
VPS36-207ENST00000611132 HIST3H2BBQ8N257 126 aa12.61□□□□□ -0.39
VPS36-207ENST00000611132 OR5R1Q8NH85 324 aa12.61□□□□□ -0.39
VPS36-207ENST00000611132 ABHD3Q8WU67 409 aa12.61□□□□□ -0.39
VPS36-207ENST00000611132 FOXD3Q9UJU5 478 aaPredicted RBP12.61□□□□□ -0.39
VPS36-207ENST00000611132 SIT1Q9Y3P8 196 aa12.61□□□□□ -0.39
VPS36-207ENST00000611132 IGKV3D-11A0A0A0MRZ8 115 aa12.61□□□□□ -0.39
VPS36-207ENST00000611132 CTAG1AP78358 180 aa12.61□□□□□ -0.39
VPS36-207ENST00000611132 MRPL54Q6P161 138 aaKnown RBP12.61□□□□□ -0.39
VPS36-207ENST00000611132 ACSM6Q6P461 480 aa12.61□□□□□ -0.39
VPS36-207ENST00000611132 OR4P4Q8NGL7 312 aa12.61□□□□□ -0.39
VPS36-207ENST00000611132 OR4X1Q8NH49 305 aa12.61□□□□□ -0.39
VPS36-207ENST00000611132 FAM173AQ9BQD7 235 aa12.61□□□□□ -0.39
VPS36-207ENST00000611132 TXNDC17Q9BRA2 123 aa12.61□□□□□ -0.39
VPS36-207ENST00000611132 UCP1P25874 307 aa12.61□□□□□ -0.39
VPS36-207ENST00000611132 CFPP27918 469 aa12.61□□□□□ -0.39
VPS36-207ENST00000611132 CASP6P55212 293 aa12.61□□□□□ -0.39
VPS36-207ENST00000611132 CEACAM21Q3KPI0 293 aa12.61□□□□□ -0.39
VPS36-207ENST00000611132 DNM1P46Q6ZS02 220 aa12.61□□□□□ -0.39
VPS36-207ENST00000611132 OR4B1Q8NGF8 309 aa12.61□□□□□ -0.39
VPS36-207ENST00000611132 PHF7Q9BWX1 381 aaPredicted RBP12.61□□□□□ -0.39
VPS36-207ENST00000611132 MED12Q93074 2177 aa12.61□□□□□ -0.39
VPS36-207ENST00000611132 TGIF2LYQ8IUE0 185 aa12.6□□□□□ -0.39
VPS36-207ENST00000611132 K7EQM0 130 aa12.6□□□□□ -0.39
VPS36-207ENST00000611132 M0R2Z0 102 aa12.6□□□□□ -0.39
VPS36-207ENST00000611132 CDIPTO14735 213 aa12.6□□□□□ -0.39
VPS36-207ENST00000611132 SRSF10O75494 262 aaKnown RBP12.6□□□□□ -0.39
VPS36-207ENST00000611132 CXCL1P09341 107 aa12.6□□□□□ -0.39
VPS36-207ENST00000611132 CD1BP29016 333 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 939.3 ms