RNA–Protein interactions for RNA: ENST00000548825.6

PRPF40B-209, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS P2 TSL 5 BASIC

Gene PRPF40B, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-209ENST00000548825 LEAP2Q969E1 77 aa11.59□□□□□ -0.55
PRPF40B-209ENST00000548825 RPUSD4Q96CM3 377 aaKnown RBP11.59□□□□□ -0.55
PRPF40B-209ENST00000548825 GINS3Q9BRX5 216 aa11.59□□□□□ -0.55
PRPF40B-209ENST00000548825 SLC25A22Q9H936 323 aa11.59□□□□□ -0.55
PRPF40B-209ENST00000548825 TMEM265A0A087WTH1 108 aa11.58□□□□□ -0.55
PRPF40B-209ENST00000548825 PSPNO60542 156 aa11.58□□□□□ -0.55
PRPF40B-209ENST00000548825 CYC1P08574 325 aa11.58□□□□□ -0.55
PRPF40B-209ENST00000548825 RAC2P15153 192 aa11.58□□□□□ -0.55
PRPF40B-209ENST00000548825 PRO3102Q9H379 93 aa11.58□□□□□ -0.55
PRPF40B-209ENST00000548825 TAAR3PQ9P1P4 343 aa11.58□□□□□ -0.55
PRPF40B-209ENST00000548825 KIAA1549Q9HCM3 1950 aa11.58□□□□□ -0.56
PRPF40B-209ENST00000548825 RELNP78509 3460 aa11.58□□□□□ -0.56
PRPF40B-209ENST00000548825 CLEC18AA5D8T8 446 aa11.58□□□□□ -0.56
PRPF40B-209ENST00000548825 NUDT19A8MXV4 375 aa11.58□□□□□ -0.56
PRPF40B-209ENST00000548825 ST8SIA5O15466 376 aa11.58□□□□□ -0.56
PRPF40B-209ENST00000548825 PSG7Q13046 419 aa11.58□□□□□ -0.56
PRPF40B-209ENST00000548825 RNPS1Q15287 305 aaKnown RBP11.58□□□□□ -0.56
PRPF40B-209ENST00000548825 FAM201AQ5SY85 155 aa11.58□□□□□ -0.56
PRPF40B-209ENST00000548825 PCSK4Q6UW60 755 aa11.58□□□□□ -0.56
PRPF40B-209ENST00000548825 ASCL4Q6XD76 172 aa11.58□□□□□ -0.56
PRPF40B-209ENST00000548825 WDR86Q86TI4 376 aa11.58□□□□□ -0.56
PRPF40B-209ENST00000548825 VKORC1L1Q8N0U8 176 aa11.58□□□□□ -0.56
PRPF40B-209ENST00000548825 CLEC18CQ8NCF0 446 aa11.58□□□□□ -0.56
PRPF40B-209ENST00000548825 RAB39BQ96DA2 213 aa11.58□□□□□ -0.56
PRPF40B-209ENST00000548825 PSG11Q9UQ72 335 aa11.58□□□□□ -0.56
PRPF40B-209ENST00000548825 YLPM1P49750 1951 aaKnown RBP11.58□□□□□ -0.56
PRPF40B-209ENST00000548825 DLK1P80370 383 aa11.58□□□□□ -0.56
PRPF40B-209ENST00000548825 KIAA0141Q14154 515 aaPredicted RBP11.58□□□□□ -0.56
PRPF40B-209ENST00000548825 SPSB4Q96A44 273 aa11.58□□□□□ -0.56
PRPF40B-209ENST00000548825 ZPBPQ9BS86 351 aa11.58□□□□□ -0.56
PRPF40B-209ENST00000548825 TMPRSS5Q9H3S3 457 aa11.58□□□□□ -0.56
PRPF40B-209ENST00000548825 RPRMQ9NS64 109 aa11.58□□□□□ -0.56
PRPF40B-209ENST00000548825 SH2D1BO14796 132 aa11.57□□□□□ -0.56
PRPF40B-209ENST00000548825 CYB5BO43169 146 aa11.57□□□□□ -0.56
PRPF40B-209ENST00000548825 SYNGR2O43760 224 aa11.57□□□□□ -0.56
PRPF40B-209ENST00000548825 RAB5AP20339 215 aa11.57□□□□□ -0.56
PRPF40B-209ENST00000548825 RAB2AP61019 212 aa11.57□□□□□ -0.56
PRPF40B-209ENST00000548825 ARL16Q0P5N6 197 aa11.57□□□□□ -0.56
PRPF40B-209ENST00000548825 TRIP6Q15654 476 aaKnown RBP11.57□□□□□ -0.56
PRPF40B-209ENST00000548825 Q3ZCU0 254 aa11.57□□□□□ -0.56
PRPF40B-209ENST00000548825 ZNF787Q6DD87 383 aa11.57□□□□□ -0.56
PRPF40B-209ENST00000548825 COLCA1Q6ZS62 124 aa11.57□□□□□ -0.56
PRPF40B-209ENST00000548825 OR2Z1Q8NG97 314 aa11.57□□□□□ -0.56
PRPF40B-209ENST00000548825 ZDHHC16Q969W1 377 aa11.57□□□□□ -0.56
PRPF40B-209ENST00000548825 NIPSNAP3BQ9BS92 247 aa11.57□□□□□ -0.56
PRPF40B-209ENST00000548825 GNG12Q9UBI6 72 aa11.57□□□□□ -0.56
PRPF40B-209ENST00000548825 METRNQ9UJH8 293 aa11.57□□□□□ -0.56
PRPF40B-209ENST00000548825 IGHV1-2P23083 117 aa11.57□□□□□ -0.56
PRPF40B-209ENST00000548825 HOXA6P31267 233 aa11.57□□□□□ -0.56
PRPF40B-209ENST00000548825 GLIPR1P48060 266 aa11.57□□□□□ -0.56
PRPF40B-209ENST00000548825 FOXF2Q12947 444 aa11.57□□□□□ -0.56
PRPF40B-209ENST00000548825 TECTBQ96PL2 329 aa11.57□□□□□ -0.56
PRPF40B-209ENST00000548825 TMEM204Q9BSN7 226 aa11.57□□□□□ -0.56
PRPF40B-209ENST00000548825 GPR87Q9BY21 358 aa11.57□□□□□ -0.56
PRPF40B-209ENST00000548825 DECR2Q9NUI1 292 aa11.57□□□□□ -0.56
PRPF40B-209ENST00000548825 IL36GQ9NZH8 169 aa11.57□□□□□ -0.56
PRPF40B-209ENST00000548825 J3QT63 122 aa11.57□□□□□ -0.56
PRPF40B-209ENST00000548825 IFNA17P01571 189 aa11.57□□□□□ -0.56
PRPF40B-209ENST00000548825 OPN1MWP04001 364 aa11.57□□□□□ -0.56
PRPF40B-209ENST00000548825 OPN1MW2P0DN77 364 aa11.57□□□□□ -0.56
PRPF40B-209ENST00000548825 OPN1MW3P0DN78 364 aa11.57□□□□□ -0.56
PRPF40B-209ENST00000548825 BAXQ07812 192 aa11.57□□□□□ -0.56
PRPF40B-209ENST00000548825 EIF3IQ13347 325 aaKnown RBP11.57□□□□□ -0.56
PRPF40B-209ENST00000548825 TMEM9BQ9NQ34 198 aa11.57□□□□□ -0.56
PRPF40B-209ENST00000548825 STRAPQ9Y3F4 350 aaKnown RBP11.57□□□□□ -0.56
PRPF40B-209ENST00000548825 MAP1AP78559 2803 aaPredicted RBP11.56□□□□□ -0.56
PRPF40B-209ENST00000548825 WNK2Q9Y3S1 2297 aa11.56□□□□□ -0.56
PRPF40B-209ENST00000548825 A0A0U1RQK1 487 aa11.56□□□□□ -0.56
PRPF40B-209ENST00000548825 HAND1O96004 215 aa11.56□□□□□ -0.56
PRPF40B-209ENST00000548825 ZNF83P51522 516 aa11.56□□□□□ -0.56
PRPF40B-209ENST00000548825 UCP3P55916 312 aa11.56□□□□□ -0.56
PRPF40B-209ENST00000548825 ADIRFQ15847 76 aa11.56□□□□□ -0.56
PRPF40B-209ENST00000548825 ZNF880Q6PDB4 577 aa11.56□□□□□ -0.56
PRPF40B-209ENST00000548825 FAM185AQ8N0U4 392 aa11.56□□□□□ -0.56
PRPF40B-209ENST00000548825 DRAM1Q8N682 238 aa11.56□□□□□ -0.56
PRPF40B-209ENST00000548825 KLF14Q8TD94 323 aaPredicted RBP11.56□□□□□ -0.56
PRPF40B-209ENST00000548825 TMEM45BQ96B21 275 aa11.56□□□□□ -0.56
PRPF40B-209ENST00000548825 OPN3Q9H1Y3 402 aaPredicted RBP11.56□□□□□ -0.56
PRPF40B-209ENST00000548825 TGIF2-C20orf24A0A0A6YYL0 155 aa11.56□□□□□ -0.56
PRPF40B-209ENST00000548825 K7N7A8 449 aa11.56□□□□□ -0.56
PRPF40B-209ENST00000548825 CTXN2P0C2S0 81 aa11.56□□□□□ -0.56
PRPF40B-209ENST00000548825 HNF1AP20823 631 aa11.56□□□□□ -0.56
PRPF40B-209ENST00000548825 UCP1P25874 307 aa11.56□□□□□ -0.56
PRPF40B-209ENST00000548825 MEOX2P50222 304 aa11.56□□□□□ -0.56
PRPF40B-209ENST00000548825 UBE2G2P60604 165 aa11.56□□□□□ -0.56
PRPF40B-209ENST00000548825 TLE4Q04727 773 aa11.56□□□□□ -0.56
PRPF40B-209ENST00000548825 FGFRL1Q8N441 504 aa11.56□□□□□ -0.56
PRPF40B-209ENST00000548825 TMEM178AQ8NBL3 297 aa11.56□□□□□ -0.56
PRPF40B-209ENST00000548825 MPC1Q9Y5U8 109 aa11.56□□□□□ -0.56
PRPF40B-209ENST00000548825 IGKV3D-15A0A087WSY6 115 aa11.55□□□□□ -0.56
PRPF40B-209ENST00000548825 TRBV23-1A0A0A0MS06 115 aa11.55□□□□□ -0.56
PRPF40B-209ENST00000548825 OR5B21A6NL26 309 aa11.55□□□□□ -0.56
PRPF40B-209ENST00000548825 EGR1P18146 543 aa11.55□□□□□ -0.56
PRPF40B-209ENST00000548825 GCH1P30793 250 aa11.55□□□□□ -0.56
PRPF40B-209ENST00000548825 UCP2P55851 309 aa11.55□□□□□ -0.56
PRPF40B-209ENST00000548825 NMSQ5H8A3 153 aa11.55□□□□□ -0.56
PRPF40B-209ENST00000548825 GTF3AQ92664 365 aaKnown RBP11.55□□□□□ -0.56
PRPF40B-209ENST00000548825 ATP5SQ99766 215 aa11.55□□□□□ -0.56
PRPF40B-209ENST00000548825 OR51I2Q9H344 312 aa11.55□□□□□ -0.56
PRPF40B-209ENST00000548825 SMPD2O60906 423 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms