RNA–Protein interactions for RNA: ENST00000493940.2

HSPG2-212, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-212ENST00000493940 PHF21AQ96BD5 680 aa9.92□□□□□ -0.82
HSPG2-212ENST00000493940 ARHGAP5-AS1Q96IT6 56 aa9.92□□□□□ -0.82
HSPG2-212ENST00000493940 NEDD4LQ96PU5 975 aa9.92□□□□□ -0.82
HSPG2-212ENST00000493940 S1PR3Q99500 378 aa9.92□□□□□ -0.82
HSPG2-212ENST00000493940 NABP2Q9BQ15 211 aa9.92□□□□□ -0.82
HSPG2-212ENST00000493940 MRPL20Q9BYC9 149 aaKnown RBP9.92□□□□□ -0.82
HSPG2-212ENST00000493940 ABCG5Q9H222 651 aa9.92□□□□□ -0.82
HSPG2-212ENST00000493940 KCNK7Q9Y2U2 307 aa9.92□□□□□ -0.82
HSPG2-212ENST00000493940 TSSC4Q9Y5U2 329 aaPredicted RBP9.92□□□□□ -0.82
HSPG2-212ENST00000493940 TNCP24821 2201 aa9.92□□□□□ -0.82
HSPG2-212ENST00000493940 NBEAL2Q6ZNJ1 2754 aa9.92□□□□□ -0.82
HSPG2-212ENST00000493940 IGKV1-6A0A0C4DH72 117 aa9.91□□□□□ -0.82
HSPG2-212ENST00000493940 TMEM272A0A1B0GTI8 110 aa9.91□□□□□ -0.82
HSPG2-212ENST00000493940 SERPINE3A8MV23 424 aa9.91□□□□□ -0.82
HSPG2-212ENST00000493940 ST8SIA5O15466 376 aa9.91□□□□□ -0.82
HSPG2-212ENST00000493940 LANCL1O43813 399 aa9.91□□□□□ -0.82
HSPG2-212ENST00000493940 YPEL1O60688 119 aa9.91□□□□□ -0.82
HSPG2-212ENST00000493940 MOSP00540 346 aa9.91□□□□□ -0.82
HSPG2-212ENST00000493940 SCTP09683 121 aa9.91□□□□□ -0.82
HSPG2-212ENST00000493940 GPR12P47775 334 aa9.91□□□□□ -0.82
HSPG2-212ENST00000493940 VEGFCP49767 419 aa9.91□□□□□ -0.82
HSPG2-212ENST00000493940 LINC00205P59089 165 aa9.91□□□□□ -0.82
HSPG2-212ENST00000493940 LSAMPQ13449 338 aa9.91□□□□□ -0.82
HSPG2-212ENST00000493940 TBCEQ15813 527 aaPredicted RBP9.91□□□□□ -0.82
HSPG2-212ENST00000493940 FOXB2Q5VYV0 432 aa9.91□□□□□ -0.82
HSPG2-212ENST00000493940 TRAT1Q6PIZ9 186 aa9.91□□□□□ -0.82
HSPG2-212ENST00000493940 CD200R1LQ6Q8B3 271 aa9.91□□□□□ -0.82
HSPG2-212ENST00000493940 SLC35E3Q7Z769 313 aa9.91□□□□□ -0.82
HSPG2-212ENST00000493940 STPG2Q8N412 459 aa9.91□□□□□ -0.82
HSPG2-212ENST00000493940 OR4F17Q8NGA8 305 aa9.91□□□□□ -0.82
HSPG2-212ENST00000493940 DUX3Q96PT4 197 aa9.91□□□□□ -0.82
HSPG2-212ENST00000493940 YPEL2Q96QA6 119 aa9.91□□□□□ -0.82
HSPG2-212ENST00000493940 OR4F4Q96R69 305 aa9.91□□□□□ -0.82
HSPG2-212ENST00000493940 ABHD14AQ9BUJ0 271 aa9.91□□□□□ -0.82
HSPG2-212ENST00000493940 IFI27L2Q9H2X8 130 aa9.91□□□□□ -0.82
HSPG2-212ENST00000493940 PLGRKTQ9HBL7 147 aa9.91□□□□□ -0.82
HSPG2-212ENST00000493940 OR1A1Q9P1Q5 309 aa9.91□□□□□ -0.82
HSPG2-212ENST00000493940 JPT1Q9UK76 154 aa9.91□□□□□ -0.82
HSPG2-212ENST00000493940 SAA2-SAA4A0A096LPE2 208 aa9.9□□□□□ -0.82
HSPG2-212ENST00000493940 SMIM30A4D0T7 59 aa9.9□□□□□ -0.82
HSPG2-212ENST00000493940 SAA2P0DJI9 122 aaPredicted RBP9.9□□□□□ -0.82
HSPG2-212ENST00000493940 ARSBP15848 533 aa9.9□□□□□ -0.82
HSPG2-212ENST00000493940 RAB11BQ15907 218 aa9.9□□□□□ -0.82
HSPG2-212ENST00000493940 RPL39P5Q59GN2 51 aa9.9□□□□□ -0.82
HSPG2-212ENST00000493940 LY6G6FQ5SQ64 297 aa9.9□□□□□ -0.82
HSPG2-212ENST00000493940 STEAP3Q658P3 488 aa9.9□□□□□ -0.82
HSPG2-212ENST00000493940 ZNF833PQ6ZTB9 187 aa9.9□□□□□ -0.82
HSPG2-212ENST00000493940 OR2W3Q7Z3T1 314 aa9.9□□□□□ -0.82
HSPG2-212ENST00000493940 ZNF554Q86TJ5 538 aa9.9□□□□□ -0.82
HSPG2-212ENST00000493940 OR4X2Q8NGF9 303 aa9.9□□□□□ -0.82
HSPG2-212ENST00000493940 IL1F10Q8WWZ1 152 aa9.9□□□□□ -0.82
HSPG2-212ENST00000493940 FAM3DQ96BQ1 224 aa9.9□□□□□ -0.82
HSPG2-212ENST00000493940 ABHD14BQ96IU4 210 aa9.9□□□□□ -0.82
HSPG2-212ENST00000493940 PECRQ9BY49 303 aa9.9□□□□□ -0.82
HSPG2-212ENST00000493940 PLEKHJ1Q9NW61 149 aa9.9□□□□□ -0.82
HSPG2-212ENST00000493940 KCNIP1Q9NZI2 227 aa9.9□□□□□ -0.82
HSPG2-212ENST00000493940 ELF5Q9UKW6 265 aaPredicted RBP9.9□□□□□ -0.82
HSPG2-212ENST00000493940 RAB26Q9ULW5 256 aa9.9□□□□□ -0.82
HSPG2-212ENST00000493940 V9GY05 133 aa9.9□□□□□ -0.82
HSPG2-212ENST00000493940 TRBV6-6A0A0A6YYG2 114 aa9.89□□□□□ -0.83
HSPG2-212ENST00000493940 ARL6IP5O75915 188 aa9.89□□□□□ -0.83
HSPG2-212ENST00000493940 RPLP1P05386 114 aaKnown RBP9.89□□□□□ -0.83
HSPG2-212ENST00000493940 CD3GP09693 182 aa9.89□□□□□ -0.83
HSPG2-212ENST00000493940 SLC2A2P11168 524 aaPredicted RBP9.89□□□□□ -0.83
HSPG2-212ENST00000493940 KRTAP10-11P60412 298 aa9.89□□□□□ -0.83
HSPG2-212ENST00000493940 RPL23AP62750 156 aaKnown RBP9.89□□□□□ -0.83
HSPG2-212ENST00000493940 CFHR3Q02985 330 aa9.89□□□□□ -0.83
HSPG2-212ENST00000493940 TRAM1Q15629 374 aa9.89□□□□□ -0.83
HSPG2-212ENST00000493940 TMEM30BQ3MIR4 351 aa9.89□□□□□ -0.83
HSPG2-212ENST00000493940 KHDC1LQ5JSQ8 128 aa9.89□□□□□ -0.83
HSPG2-212ENST00000493940 GLDNQ6ZMI3 551 aaPredicted RBP9.89□□□□□ -0.83
HSPG2-212ENST00000493940 C8orf86Q6ZUL3 223 aa9.89□□□□□ -0.83
HSPG2-212ENST00000493940 ZNF367Q7RTV3 350 aa9.89□□□□□ -0.83
HSPG2-212ENST00000493940 SPARTQ8N0X7 666 aa9.89□□□□□ -0.83
HSPG2-212ENST00000493940 LINC00482Q8N8I6 264 aa9.89□□□□□ -0.83
HSPG2-212ENST00000493940 SETD6Q8TBK2 473 aa9.89□□□□□ -0.83
HSPG2-212ENST00000493940 CHPT1Q8WUD6 406 aa9.89□□□□□ -0.83
HSPG2-212ENST00000493940 GALMQ96C23 342 aa9.89□□□□□ -0.83
HSPG2-212ENST00000493940 AGMATQ9BSE5 352 aa9.89□□□□□ -0.83
HSPG2-212ENST00000493940 Q9N2K0 584 aa9.89□□□□□ -0.83
HSPG2-212ENST00000493940 LIN7CQ9NUP9 197 aaKnown RBP9.89□□□□□ -0.83
HSPG2-212ENST00000493940 AURKAIP1Q9NWT8 199 aaPredicted RBP9.89□□□□□ -0.83
HSPG2-212ENST00000493940 NDUFB11Q9NX14 153 aa9.89□□□□□ -0.83
HSPG2-212ENST00000493940 ZNF107Q9UII5 783 aaPredicted RBP9.89□□□□□ -0.83
HSPG2-212ENST00000493940 CT45A6P0DMU7 189 aa9.88□□□□□ -0.83
HSPG2-212ENST00000493940 CT45A5P0DMU8 189 aa9.88□□□□□ -0.83
HSPG2-212ENST00000493940 CT45A7P0DMV0 189 aa9.88□□□□□ -0.83
HSPG2-212ENST00000493940 PF4V1P10720 104 aa9.88□□□□□ -0.83
HSPG2-212ENST00000493940 CD33P20138 364 aa9.88□□□□□ -0.83
HSPG2-212ENST00000493940 IL3RAP26951 378 aa9.88□□□□□ -0.83
HSPG2-212ENST00000493940 HSPA13P48723 471 aa9.88□□□□□ -0.83
HSPG2-212ENST00000493940 THBS3P49746 956 aa9.88□□□□□ -0.83
HSPG2-212ENST00000493940 KIAA0141Q14154 515 aaPredicted RBP9.88□□□□□ -0.83
HSPG2-212ENST00000493940 MRPL41Q8IXM3 137 aaKnown RBP9.88□□□□□ -0.83
HSPG2-212ENST00000493940 C11orf54Q9H0W9 315 aaPredicted RBP9.88□□□□□ -0.83
HSPG2-212ENST00000493940 VCX3BQ9H321 246 aa9.88□□□□□ -0.83
HSPG2-212ENST00000493940 STEAP1Q9UHE8 339 aa9.88□□□□□ -0.83
HSPG2-212ENST00000493940 RNF150Q9ULK6 438 aa9.88□□□□□ -0.83
HSPG2-212ENST00000493940 HSF4Q9ULV5 492 aa9.88□□□□□ -0.83
HSPG2-212ENST00000493940 FBXO7Q9Y3I1 522 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms