RNA–Protein interactions for RNA: ENST00000406019.1

HMGB1P13-201, Transcript of high mobility group box 1 pseudogene 13, humanhuman

BASIC

Gene HMGB1P13, Length 642 nt, Biotype processed pseudogene.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P13-201ENST00000406019 TBL1XR1Q9BZK7 514 aa3.14□□□□□ -1.91
HMGB1P13-201ENST00000406019 FGF23Q9GZV9 251 aaPredicted RBP3.14□□□□□ -1.91
HMGB1P13-201ENST00000406019 DSN1Q9H410 356 aa3.14□□□□□ -1.91
HMGB1P13-201ENST00000406019 GNG8Q9UK08 70 aa3.14□□□□□ -1.91
HMGB1P13-201ENST00000406019 ABCC10Q5T3U5 1492 aa3.14□□□□□ -1.91
HMGB1P13-201ENST00000406019 ARAP1Q96P48 1450 aa3.14□□□□□ -1.91
HMGB1P13-201ENST00000406019 IGHV3-72A0A0B4J1Y9 119 aa3.13□□□□□ -1.91
HMGB1P13-201ENST00000406019 LINC00862A6NCI5 91 aa3.13□□□□□ -1.91
HMGB1P13-201ENST00000406019 FAM159BA6NKW6 160 aa3.13□□□□□ -1.91
HMGB1P13-201ENST00000406019 CLDN24A6NM45 220 aa3.13□□□□□ -1.91
HMGB1P13-201ENST00000406019 ZNF705GA8MUZ8 300 aaPredicted RBP3.13□□□□□ -1.91
HMGB1P13-201ENST00000406019 NDUFC2-KCTD14E9PQ53 114 aa3.13□□□□□ -1.91
HMGB1P13-201ENST00000406019 MANBAO00462 879 aa3.13□□□□□ -1.91
HMGB1P13-201ENST00000406019 MYL12BO14950 172 aa3.13□□□□□ -1.91
HMGB1P13-201ENST00000406019 GYG2O15488 501 aa3.13□□□□□ -1.91
HMGB1P13-201ENST00000406019 ZNF207O43670 478 aaKnown RBP3.13□□□□□ -1.91
HMGB1P13-201ENST00000406019 PDE6DO43924 150 aa3.13□□□□□ -1.91
HMGB1P13-201ENST00000406019 BANF1O75531 89 aa3.13□□□□□ -1.91
HMGB1P13-201ENST00000406019 HAND1O96004 215 aa3.13□□□□□ -1.91
HMGB1P13-201ENST00000406019 PDYNP01213 254 aa3.13□□□□□ -1.91
HMGB1P13-201ENST00000406019 C8GP07360 202 aa3.13□□□□□ -1.91
HMGB1P13-201ENST00000406019 CELP19835 753 aa3.13□□□□□ -1.91
HMGB1P13-201ENST00000406019 SDC4P31431 198 aa3.13□□□□□ -1.91
HMGB1P13-201ENST00000406019 TAS2R31P59538 309 aa3.13□□□□□ -1.91
HMGB1P13-201ENST00000406019 DYNLL1P63167 89 aaKnown RBP3.13□□□□□ -1.91
HMGB1P13-201ENST00000406019 RUNX1Q01196 453 aa3.13□□□□□ -1.91
HMGB1P13-201ENST00000406019 OR2F1Q13607 317 aa3.13□□□□□ -1.91
HMGB1P13-201ENST00000406019 C16orf72Q14CZ0 275 aa3.13□□□□□ -1.91
HMGB1P13-201ENST00000406019 NEDD8Q15843 81 aa3.13□□□□□ -1.91
HMGB1P13-201ENST00000406019 LRRC75BQ2VPJ9 315 aa3.13□□□□□ -1.91
HMGB1P13-201ENST00000406019 CDNFQ49AH0 187 aa3.13□□□□□ -1.91
HMGB1P13-201ENST00000406019 CCSMST1Q4G0I0 132 aa3.13□□□□□ -1.91
HMGB1P13-201ENST00000406019 FAM78AQ5JUQ0 283 aa3.13□□□□□ -1.91
HMGB1P13-201ENST00000406019 OPN5Q6U736 354 aa3.13□□□□□ -1.91
HMGB1P13-201ENST00000406019 TMPPEQ6ZT21 453 aa3.13□□□□□ -1.91
HMGB1P13-201ENST00000406019 CPNE9Q8IYJ1 553 aa3.13□□□□□ -1.91
HMGB1P13-201ENST00000406019 GAPTQ8N292 157 aa3.13□□□□□ -1.91
HMGB1P13-201ENST00000406019 ZCCHC24Q8N2G6 241 aaKnown RBP3.13□□□□□ -1.91
HMGB1P13-201ENST00000406019 DRAM1Q8N682 238 aa3.13□□□□□ -1.91
HMGB1P13-201ENST00000406019 Q8N7P7 452 aa3.13□□□□□ -1.91
HMGB1P13-201ENST00000406019 OR10A6Q8NH74 314 aa3.13□□□□□ -1.91
HMGB1P13-201ENST00000406019 OR1S1Q8NH92 325 aa3.13□□□□□ -1.91
HMGB1P13-201ENST00000406019 FAM45AQ8TCE6 357 aa3.13□□□□□ -1.91
HMGB1P13-201ENST00000406019 Q8WTZ3 238 aa3.13□□□□□ -1.91
HMGB1P13-201ENST00000406019 CLDN23Q96B33 292 aa3.13□□□□□ -1.91
HMGB1P13-201ENST00000406019 PYURFQ96I23 114 aa3.13□□□□□ -1.91
HMGB1P13-201ENST00000406019 NARS2Q96I59 477 aaKnown RBP3.13□□□□□ -1.91
HMGB1P13-201ENST00000406019 PPP3R2Q96LZ3 170 aa3.13□□□□□ -1.91
HMGB1P13-201ENST00000406019 KRTAP4-3Q9BYR4 195 aa3.13□□□□□ -1.91
HMGB1P13-201ENST00000406019 DHX35Q9H5Z1 703 aaKnown RBP3.13□□□□□ -1.91
HMGB1P13-201ENST00000406019 PLEKHF2Q9H8W4 249 aa3.13□□□□□ -1.91
HMGB1P13-201ENST00000406019 C8orf17Q9NRJ1 99 aa3.13□□□□□ -1.91
HMGB1P13-201ENST00000406019 GLS2Q9UI32 602 aa3.13□□□□□ -1.91
HMGB1P13-201ENST00000406019 TBX21Q9UL17 535 aa3.13□□□□□ -1.91
HMGB1P13-201ENST00000406019 MED14O60244 1454 aa3.13□□□□□ -1.91
HMGB1P13-201ENST00000406019 NAV1Q8NEY1 1877 aa3.13□□□□□ -1.91
HMGB1P13-201ENST00000406019 SMARCA4P51532 1647 aa3.12□□□□□ -1.91
HMGB1P13-201ENST00000406019 OVOS2A0A0J9YW53 1432 aa3.12□□□□□ -1.91
HMGB1P13-201ENST00000406019 NOS1P29475 1434 aa3.12□□□□□ -1.91
HMGB1P13-201ENST00000406019 OVOS2Q6IE36 1432 aa3.12□□□□□ -1.91
HMGB1P13-201ENST00000406019 GAPVD1Q14C86 1478 aa3.12□□□□□ -1.91
HMGB1P13-201ENST00000406019 ARHGAP35Q9NRY4 1499 aa3.12□□□□□ -1.91
HMGB1P13-201ENST00000406019 A0A087WUJ7 227 aa3.12□□□□□ -1.91
HMGB1P13-201ENST00000406019 MEIKINA0A087WXM9 373 aa3.12□□□□□ -1.91
HMGB1P13-201ENST00000406019 TRAV8-6A0A0B4J262 113 aa3.12□□□□□ -1.91
HMGB1P13-201ENST00000406019 VPS37CA5D8V6 355 aaPredicted RBP3.12□□□□□ -1.91
HMGB1P13-201ENST00000406019 PPP5D1E7EU14 171 aa3.12□□□□□ -1.91
HMGB1P13-201ENST00000406019 H0YJW9 148 aa3.12□□□□□ -1.91
HMGB1P13-201ENST00000406019 SSNA1O43805 119 aa3.12□□□□□ -1.91
HMGB1P13-201ENST00000406019 CCNE2O96020 404 aa3.12□□□□□ -1.91
HMGB1P13-201ENST00000406019 IGLV2-8P01709 118 aa3.12□□□□□ -1.91
HMGB1P13-201ENST00000406019 APCSP02743 223 aa3.12□□□□□ -1.91
HMGB1P13-201ENST00000406019 RLN2P04090 185 aa3.12□□□□□ -1.91
HMGB1P13-201ENST00000406019 COPZ1P61923 177 aa3.12□□□□□ -1.91
HMGB1P13-201ENST00000406019 PKIAP61925 76 aa3.12□□□□□ -1.91
HMGB1P13-201ENST00000406019 BTN3A2P78410 334 aa3.12□□□□□ -1.91
HMGB1P13-201ENST00000406019 PSG4Q00888 419 aa3.12□□□□□ -1.91
HMGB1P13-201ENST00000406019 SPA17Q15506 151 aa3.12□□□□□ -1.91
HMGB1P13-201ENST00000406019 UBE2SQ16763 222 aa3.12□□□□□ -1.91
HMGB1P13-201ENST00000406019 DEFB116Q30KQ4 102 aa3.12□□□□□ -1.91
HMGB1P13-201ENST00000406019 CEACAM21Q3KPI0 293 aa3.12□□□□□ -1.91
HMGB1P13-201ENST00000406019 OCIAD2Q56VL3 154 aa3.12□□□□□ -1.91
HMGB1P13-201ENST00000406019 TTC32Q5I0X7 151 aa3.12□□□□□ -1.91
HMGB1P13-201ENST00000406019 PABPC1L2AQ5JQF8 200 aa3.12□□□□□ -1.91
HMGB1P13-201ENST00000406019 WDR86Q86TI4 376 aa3.12□□□□□ -1.91
HMGB1P13-201ENST00000406019 ZNF567Q8N184 647 aa3.12□□□□□ -1.91
HMGB1P13-201ENST00000406019 SPICQ8N5J4 248 aa3.12□□□□□ -1.91
HMGB1P13-201ENST00000406019 OR4K5Q8NGD3 323 aa3.12□□□□□ -1.91
HMGB1P13-201ENST00000406019 OR1J4Q8NGS1 313 aa3.12□□□□□ -1.91
HMGB1P13-201ENST00000406019 BIRC8Q96P09 236 aa3.12□□□□□ -1.91
HMGB1P13-201ENST00000406019 SIGMAR1Q99720 223 aa3.12□□□□□ -1.91
HMGB1P13-201ENST00000406019 SUCNR1Q9BXA5 334 aa3.12□□□□□ -1.91
HMGB1P13-201ENST00000406019 OR51I1Q9H343 314 aa3.12□□□□□ -1.91
HMGB1P13-201ENST00000406019 MAP1LC3AQ9H492 121 aa3.12□□□□□ -1.91
HMGB1P13-201ENST00000406019 TAS2R13Q9NYV9 303 aa3.12□□□□□ -1.91
HMGB1P13-201ENST00000406019 ZNRD1Q9P1U0 126 aa3.12□□□□□ -1.91
HMGB1P13-201ENST00000406019 ZNF222Q9UK12 451 aa3.12□□□□□ -1.91
HMGB1P13-201ENST00000406019 SSR3Q9UNL2 185 aa3.12□□□□□ -1.91
HMGB1P13-201ENST00000406019 UTP11Q9Y3A2 253 aaKnown RBP3.12□□□□□ -1.91
HMGB1P13-201ENST00000406019 HSPE1-MOB4S4R3N1 261 aa3.12□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms