RNA–Protein interactions for RNA: ENST00000395969.6

VPS41-203, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5 BASIC

Gene VPS41, Length 3,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-203ENST00000395969 SARAFQ96BY9 339 aa4.57□□□□□ -1.68
VPS41-203ENST00000395969 VPS25Q9BRG1 176 aa4.57□□□□□ -1.68
VPS41-203ENST00000395969 E5RGE8 158 aa4.56□□□□□ -1.68
VPS41-203ENST00000395969 GPR137BO60478 399 aa4.56□□□□□ -1.68
VPS41-203ENST00000395969 RPLP1P05386 114 aaKnown RBP4.56□□□□□ -1.68
VPS41-203ENST00000395969 PI3P19957 117 aa4.56□□□□□ -1.68
VPS41-203ENST00000395969 FUT3P21217 361 aa4.56□□□□□ -1.68
VPS41-203ENST00000395969 MAGEA5P43359 124 aa4.56□□□□□ -1.68
VPS41-203ENST00000395969 ACSF3Q4G176 576 aaPredicted RBP4.56□□□□□ -1.68
VPS41-203ENST00000395969 SAPCD1Q5SSQ6 148 aa4.56□□□□□ -1.68
VPS41-203ENST00000395969 C1orf194Q5T5A4 169 aa4.56□□□□□ -1.68
VPS41-203ENST00000395969 ZNF774Q6NX45 483 aa4.56□□□□□ -1.68
VPS41-203ENST00000395969 PLXDC2Q6UX71 529 aa4.56□□□□□ -1.68
VPS41-203ENST00000395969 OR52N4Q8NGI2 321 aa4.56□□□□□ -1.68
VPS41-203ENST00000395969 APH1AQ96BI3 265 aa4.56□□□□□ -1.68
VPS41-203ENST00000395969 FGGYQ96C11 551 aa4.56□□□□□ -1.68
VPS41-203ENST00000395969 ABHD14BQ96IU4 210 aa4.56□□□□□ -1.68
VPS41-203ENST00000395969 ATP6V0BQ99437 205 aa4.56□□□□□ -1.68
VPS41-203ENST00000395969 CITED2Q99967 270 aaPredicted RBP4.56□□□□□ -1.68
VPS41-203ENST00000395969 FAAP24Q9BTP7 215 aa4.56□□□□□ -1.68
VPS41-203ENST00000395969 VAX2Q9UIW0 290 aa4.56□□□□□ -1.68
VPS41-203ENST00000395969 RCL1Q9Y2P8 373 aaKnown RBP4.56□□□□□ -1.68
VPS41-203ENST00000395969 NSG2Q9Y328 171 aa4.56□□□□□ -1.68
VPS41-203ENST00000395969 CLEC18AA5D8T8 446 aa4.56□□□□□ -1.68
VPS41-203ENST00000395969 TRDCB7Z8K6 153 aa4.56□□□□□ -1.68
VPS41-203ENST00000395969 P2RY10O00398 339 aa4.56□□□□□ -1.68
VPS41-203ENST00000395969 SCGB1D1O95968 90 aa4.56□□□□□ -1.68
VPS41-203ENST00000395969 OR4A8P0C604 315 aa4.56□□□□□ -1.68
VPS41-203ENST00000395969 GLRA1P23415 457 aa4.56□□□□□ -1.68
VPS41-203ENST00000395969 UCNP55089 124 aa4.56□□□□□ -1.68
VPS41-203ENST00000395969 TAS2R46P59540 309 aa4.56□□□□□ -1.68
VPS41-203ENST00000395969 KISS1Q15726 138 aa4.56□□□□□ -1.68
VPS41-203ENST00000395969 TSPO2Q5TGU0 170 aa4.56□□□□□ -1.68
VPS41-203ENST00000395969 TEX38Q6PEX7 206 aa4.56□□□□□ -1.68
VPS41-203ENST00000395969 TMEM108Q6UXF1 575 aa4.56□□□□□ -1.68
VPS41-203ENST00000395969 FAM214BQ7L5A3 538 aa4.56□□□□□ -1.68
VPS41-203ENST00000395969 P4HA3Q7Z4N8 544 aa4.56□□□□□ -1.68
VPS41-203ENST00000395969 Q8IYB0 196 aa4.56□□□□□ -1.68
VPS41-203ENST00000395969 CLEC18CQ8NCF0 446 aa4.56□□□□□ -1.68
VPS41-203ENST00000395969 CHST4Q8NCG5 386 aa4.56□□□□□ -1.68
VPS41-203ENST00000395969 OR4X1Q8NH49 305 aa4.56□□□□□ -1.68
VPS41-203ENST00000395969 OR5P3Q8WZ94 311 aa4.56□□□□□ -1.68
VPS41-203ENST00000395969 EXTL1Q92935 676 aa4.56□□□□□ -1.68
VPS41-203ENST00000395969 EMG1Q92979 244 aaKnown RBP4.56□□□□□ -1.68
VPS41-203ENST00000395969 NIPSNAP3BQ9BS92 247 aa4.56□□□□□ -1.68
VPS41-203ENST00000395969 URM1Q9BTM9 101 aaKnown RBP4.56□□□□□ -1.68
VPS41-203ENST00000395969 EMC6Q9BV81 110 aa4.56□□□□□ -1.68
VPS41-203ENST00000395969 SFXN3Q9BWM7 321 aa4.56□□□□□ -1.68
VPS41-203ENST00000395969 LINC00574Q9H8X3 128 aa4.56□□□□□ -1.68
VPS41-203ENST00000395969 DOCK11Q5JSL3 2073 aa4.56□□□□□ -1.68
VPS41-203ENST00000395969 A0A1B0GU03 582 aa4.55□□□□□ -1.68
VPS41-203ENST00000395969 DUXBA0A1W2PPF3 345 aa4.55□□□□□ -1.68
VPS41-203ENST00000395969 MRPL33O75394 65 aaKnown RBP4.55□□□□□ -1.68
VPS41-203ENST00000395969 TNFSF13O75888 250 aa4.55□□□□□ -1.68
VPS41-203ENST00000395969 NAPSAO96009 420 aa4.55□□□□□ -1.68
VPS41-203ENST00000395969 HLA-DQA2P01906 255 aa4.55□□□□□ -1.68
VPS41-203ENST00000395969 ZNF32P17041 273 aa4.55□□□□□ -1.68
VPS41-203ENST00000395969 GUCA1AP43080 201 aaPredicted RBP4.55□□□□□ -1.68
VPS41-203ENST00000395969 TMEM50BP56557 158 aa4.55□□□□□ -1.68
VPS41-203ENST00000395969 HLA-DRB3P79483 266 aa4.55□□□□□ -1.68
VPS41-203ENST00000395969 HERPUD1Q15011 391 aa4.55□□□□□ -1.68
VPS41-203ENST00000395969 PLAC9Q5JTB6 97 aa4.55□□□□□ -1.68
VPS41-203ENST00000395969 YRDCQ86U90 279 aaKnown RBP4.55□□□□□ -1.68
VPS41-203ENST00000395969 SLC35G3Q8N808 338 aa4.55□□□□□ -1.68
VPS41-203ENST00000395969 CYB561D1Q8N8Q1 229 aa4.55□□□□□ -1.68
VPS41-203ENST00000395969 FNDC9Q8TBE3 224 aa4.55□□□□□ -1.68
VPS41-203ENST00000395969 FAM213BQ8TBF2 198 aa4.55□□□□□ -1.68
VPS41-203ENST00000395969 OR51E1Q8TCB6 317 aa4.55□□□□□ -1.68
VPS41-203ENST00000395969 PYGO2Q9BRQ0 406 aa4.55□□□□□ -1.68
VPS41-203ENST00000395969 PIMREGQ9BSJ6 248 aa4.55□□□□□ -1.68
VPS41-203ENST00000395969 CABLES2Q9BTV7 478 aa4.55□□□□□ -1.68
VPS41-203ENST00000395969 SRD5A3Q9H8P0 318 aa4.55□□□□□ -1.68
VPS41-203ENST00000395969 DNAJC4Q9NNZ3 241 aa4.55□□□□□ -1.68
VPS41-203ENST00000395969 SLC7A10Q9NS82 523 aa4.55□□□□□ -1.68
VPS41-203ENST00000395969 ELOVL5Q9NYP7 299 aa4.55□□□□□ -1.68
VPS41-203ENST00000395969 GAB2Q9UQC2 676 aa4.55□□□□□ -1.68
VPS41-203ENST00000395969 CACNA1GO43497 2377 aa4.55□□□□□ -1.68
VPS41-203ENST00000395969 ZNF705FA8MVS1 300 aaPredicted RBP4.55□□□□□ -1.68
VPS41-203ENST00000395969 CLDN34H7C241 214 aa4.55□□□□□ -1.68
VPS41-203ENST00000395969 ITGB1BP1O14713 200 aa4.55□□□□□ -1.68
VPS41-203ENST00000395969 LMX1BO60663 402 aa4.55□□□□□ -1.68
VPS41-203ENST00000395969 TRAPPC6AO75865 159 aa4.55□□□□□ -1.68
VPS41-203ENST00000395969 ZNF705DP0CH99 300 aaPredicted RBP4.55□□□□□ -1.68
VPS41-203ENST00000395969 ZNF705BP0CI00 300 aaPredicted RBP4.55□□□□□ -1.68
VPS41-203ENST00000395969 ZNF20P17024 532 aa4.55□□□□□ -1.68
VPS41-203ENST00000395969 SFTPDP35247 375 aa4.55□□□□□ -1.68
VPS41-203ENST00000395969 MDH2P40926 338 aaKnown RBP4.55□□□□□ -1.68
VPS41-203ENST00000395969 GATA4P43694 442 aa4.55□□□□□ -1.68
VPS41-203ENST00000395969 OR3A1P47881 315 aa4.55□□□□□ -1.68
VPS41-203ENST00000395969 ASCL1P50553 236 aa4.55□□□□□ -1.68
VPS41-203ENST00000395969 FGF12P61328 243 aa4.55□□□□□ -1.68
VPS41-203ENST00000395969 PNRC1Q12796 327 aaPredicted RBP4.55□□□□□ -1.68
VPS41-203ENST00000395969 CEACAM16Q2WEN9 425 aa4.55□□□□□ -1.68
VPS41-203ENST00000395969 SNAI3Q3KNW1 292 aa4.55□□□□□ -1.68
VPS41-203ENST00000395969 TMEM30BQ3MIR4 351 aa4.55□□□□□ -1.68
VPS41-203ENST00000395969 TMEM182Q6ZP80 229 aaPredicted RBP4.55□□□□□ -1.68
VPS41-203ENST00000395969 SGPP2Q8IWX5 399 aa4.55□□□□□ -1.68
VPS41-203ENST00000395969 WDR31Q8NA23 367 aa4.55□□□□□ -1.68
VPS41-203ENST00000395969 DEFB124Q8NES8 71 aa4.55□□□□□ -1.68
VPS41-203ENST00000395969 NUP37Q8NFH4 326 aa4.55□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 70.4 ms