RNA–Protein interactions for RNA: ENST00000361311.4

CLSTN1-201, Transcript of calsyntenin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLSTN1, Length 4,647 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-201ENST00000361311 Q6ZS52 159 aa13.82□□□□□ -0.2
CLSTN1-201ENST00000361311 SH2D2AQ9NP31 389 aa13.82□□□□□ -0.2
CLSTN1-201ENST00000361311 MED12Q93074 2177 aa13.82□□□□□ -0.2
CLSTN1-201ENST00000361311 RAB7AP51149 207 aa13.82□□□□□ -0.2
CLSTN1-201ENST00000361311 RAC3P60763 192 aa13.82□□□□□ -0.2
CLSTN1-201ENST00000361311 LEMD1Q68G75 181 aa13.82□□□□□ -0.2
CLSTN1-201ENST00000361311 WFDC1Q9HC57 220 aa13.82□□□□□ -0.2
CLSTN1-201ENST00000361311 TGFBR3LH3BV60 316 aa13.81□□□□□ -0.2
CLSTN1-201ENST00000361311 PGLYRP1O75594 196 aaPredicted RBP13.81□□□□□ -0.2
CLSTN1-201ENST00000361311 ASPHD2Q6ICH7 369 aa13.81□□□□□ -0.2
CLSTN1-201ENST00000361311 GSX1Q9H4S2 264 aaPredicted RBP13.81□□□□□ -0.2
CLSTN1-201ENST00000361311 PTPRDP23468 1912 aa13.81□□□□□ -0.2
CLSTN1-201ENST00000361311 K7ERU9 68 aa13.81□□□□□ -0.2
CLSTN1-201ENST00000361311 TNFRSF9Q07011 255 aa13.81□□□□□ -0.2
CLSTN1-201ENST00000361311 RTP5Q14D33 572 aa13.81□□□□□ -0.2
CLSTN1-201ENST00000361311 OR2M3Q8NG83 312 aa13.81□□□□□ -0.2
CLSTN1-201ENST00000361311 OCIAD1Q9NX40 245 aa13.81□□□□□ -0.2
CLSTN1-201ENST00000361311 FOXJ2Q9P0K8 574 aa13.81□□□□□ -0.2
CLSTN1-201ENST00000361311 PMELP40967 661 aa13.81□□□□□ -0.2
CLSTN1-201ENST00000361311 TFF2Q03403 129 aa13.81□□□□□ -0.2
CLSTN1-201ENST00000361311 FAM27BQ5VT28 67 aa13.81□□□□□ -0.2
CLSTN1-201ENST00000361311 BTNL3Q6UXE8 466 aa13.81□□□□□ -0.2
CLSTN1-201ENST00000361311 OR4P4Q8NGL7 312 aa13.81□□□□□ -0.2
CLSTN1-201ENST00000361311 MAFAQ8NHW3 353 aaPredicted RBP13.81□□□□□ -0.2
CLSTN1-201ENST00000361311 WASHC3Q9Y3C0 194 aa13.81□□□□□ -0.2
CLSTN1-201ENST00000361311 ASXL3Q9C0F0 2248 aa13.81□□□□□ -0.2
CLSTN1-201ENST00000361311 DBX1A6NMT0 343 aa13.81□□□□□ -0.2
CLSTN1-201ENST00000361311 LDLRAD4O15165 306 aa13.81□□□□□ -0.2
CLSTN1-201ENST00000361311 SELEP16581 610 aa13.81□□□□□ -0.2
CLSTN1-201ENST00000361311 CHRNB4P30926 498 aa13.81□□□□□ -0.2
CLSTN1-201ENST00000361311 TGIF2LYQ8IUE0 185 aa13.81□□□□□ -0.2
CLSTN1-201ENST00000361311 OR2H1Q9GZK4 316 aa13.81□□□□□ -0.2
CLSTN1-201ENST00000361311 OPN3Q9H1Y3 402 aaPredicted RBP13.81□□□□□ -0.2
CLSTN1-201ENST00000361311 IGHV3-43A0A0B4J1X8 118 aa13.8□□□□□ -0.2
CLSTN1-201ENST00000361311 LINC01565O15544 149 aa13.8□□□□□ -0.2
CLSTN1-201ENST00000361311 SRSF10O75494 262 aaKnown RBP13.8□□□□□ -0.2
CLSTN1-201ENST00000361311 IGHV3-43DP0DP04 118 aa13.8□□□□□ -0.2
CLSTN1-201ENST00000361311 ERVFRD-1P60508 538 aa13.8□□□□□ -0.2
CLSTN1-201ENST00000361311 SLC35B1P78383 322 aa13.8□□□□□ -0.2
CLSTN1-201ENST00000361311 IGFBP7Q16270 282 aa13.8□□□□□ -0.2
CLSTN1-201ENST00000361311 RHBDD2Q6NTF9 364 aa13.8□□□□□ -0.2
CLSTN1-201ENST00000361311 ZNF818PQ6ZRF7 136 aa13.8□□□□□ -0.2
CLSTN1-201ENST00000361311 OR10D3Q8NH80 312 aa13.8□□□□□ -0.2
CLSTN1-201ENST00000361311 COMMD5Q9GZQ3 224 aa13.8□□□□□ -0.2
CLSTN1-201ENST00000361311 TMEM191AQ9H0A3 160 aa13.8□□□□□ -0.2
CLSTN1-201ENST00000361311 MRPL18Q9H0U6 180 aaKnown RBP13.8□□□□□ -0.2
CLSTN1-201ENST00000361311 HELTA6NFD8 242 aa13.8□□□□□ -0.2
CLSTN1-201ENST00000361311 GALR2O43603 387 aaPredicted RBP13.8□□□□□ -0.2
CLSTN1-201ENST00000361311 COX7A2P2O60397 106 aa13.8□□□□□ -0.2
CLSTN1-201ENST00000361311 TNFSF4P23510 183 aa13.8□□□□□ -0.2
CLSTN1-201ENST00000361311 GMPPAQ96IJ6 420 aaPredicted RBP13.8□□□□□ -0.2
CLSTN1-201ENST00000361311 PSMG3Q9BT73 122 aaPredicted RBP13.8□□□□□ -0.2
CLSTN1-201ENST00000361311 A0A1W2PQF6 199 aa13.8□□□□□ -0.2
CLSTN1-201ENST00000361311 SUB1P53999 127 aaKnown RBP eCLIP13.8□□□□□ -0.2
CLSTN1-201ENST00000361311 CXorf67Q86X51 503 aaPredicted RBP13.8□□□□□ -0.2
CLSTN1-201ENST00000361311 TM2D1Q9BX74 207 aa13.8□□□□□ -0.2
CLSTN1-201ENST00000361311 NPIPB13A6NJU9 1138 aa13.79□□□□□ -0.2
CLSTN1-201ENST00000361311 NPIPB4C9JG80 1138 aa13.79□□□□□ -0.2
CLSTN1-201ENST00000361311 CXorf1O96002 111 aa13.79□□□□□ -0.2
CLSTN1-201ENST00000361311 BPIFB3P59826 476 aa13.79□□□□□ -0.2
CLSTN1-201ENST00000361311 PSG5Q15238 335 aa13.79□□□□□ -0.2
CLSTN1-201ENST00000361311 SNAI3Q3KNW1 292 aa13.79□□□□□ -0.2
CLSTN1-201ENST00000361311 C1orf53Q5VUE5 145 aa13.79□□□□□ -0.2
CLSTN1-201ENST00000361311 PARD6GQ9BYG4 376 aaPredicted RBP13.79□□□□□ -0.2
CLSTN1-201ENST00000361311 TMEM38BQ9NVV0 291 aa13.79□□□□□ -0.2
CLSTN1-201ENST00000361311 POU2F2P09086 479 aa13.79□□□□□ -0.2
CLSTN1-201ENST00000361311 FAM173AQ9BQD7 235 aa13.79□□□□□ -0.2
CLSTN1-201ENST00000361311 DNAJC4Q9NNZ3 241 aa13.79□□□□□ -0.2
CLSTN1-201ENST00000361311 TMEM167BQ9NRX6 74 aa13.79□□□□□ -0.2
CLSTN1-201ENST00000361311 MPC1Q9Y5U8 109 aa13.79□□□□□ -0.2
CLSTN1-201ENST00000361311 ATP23Q9Y6H3 246 aa13.79□□□□□ -0.2
CLSTN1-201ENST00000361311 CD46P15529 392 aa13.79□□□□□ -0.2
CLSTN1-201ENST00000361311 ERHP84090 104 aaKnown RBP13.79□□□□□ -0.2
CLSTN1-201ENST00000361311 DCAF12Q5T6F0 453 aa13.79□□□□□ -0.2
CLSTN1-201ENST00000361311 SPTBN2O15020 2390 aa13.79□□□□□ -0.2
CLSTN1-201ENST00000361311 ENSAO43768 121 aaKnown RBP13.79□□□□□ -0.2
CLSTN1-201ENST00000361311 EGR1P18146 543 aa13.79□□□□□ -0.2
CLSTN1-201ENST00000361311 MRGPRDQ8TDS7 321 aa13.79□□□□□ -0.2
CLSTN1-201ENST00000361311 ZNF835Q9Y2P0 537 aa13.79□□□□□ -0.2
CLSTN1-201ENST00000361311 AMBPP02760 352 aa13.78□□□□□ -0.2
CLSTN1-201ENST00000361311 NUTF2P61970 127 aaKnown RBP13.78□□□□□ -0.2
CLSTN1-201ENST00000361311 HLA-BQ31612 363 aa13.78□□□□□ -0.2
CLSTN1-201ENST00000361311 R3HDM4Q96D70 268 aa13.78□□□□□ -0.2
CLSTN1-201ENST00000361311 SF3B5Q9BWJ5 86 aaKnown RBP13.78□□□□□ -0.2
CLSTN1-201ENST00000361311 ARHGEF17Q96PE2 2063 aaPredicted RBP13.78□□□□□ -0.2
CLSTN1-201ENST00000361311 A0A0A6YYD4 124 aa13.78□□□□□ -0.2
CLSTN1-201ENST00000361311 SCGB2A1O75556 95 aa13.78□□□□□ -0.2
CLSTN1-201ENST00000361311 MT-ND6P03923 174 aa13.78□□□□□ -0.2
CLSTN1-201ENST00000361311 SMIM21Q3B7S5 101 aa13.78□□□□□ -0.2
CLSTN1-201ENST00000361311 LHFPL1Q86WI0 220 aa13.78□□□□□ -0.2
CLSTN1-201ENST00000361311 HSD17B10Q99714 261 aaKnown RBP13.78□□□□□ -0.2
CLSTN1-201ENST00000361311 SMOC1Q9H4F8 434 aa13.78□□□□□ -0.2
CLSTN1-201ENST00000361311 K7EQM0 130 aa13.78□□□□□ -0.2
CLSTN1-201ENST00000361311 FA2HQ7L5A8 372 aa13.78□□□□□ -0.2
CLSTN1-201ENST00000361311 SCARF2Q96GP6 870 aaPredicted RBP13.78□□□□□ -0.2
CLSTN1-201ENST00000361311 POM121L2Q96KW2 1035 aa13.78□□□□□ -0.2
CLSTN1-201ENST00000361311 C2orf88Q9BSF0 95 aa13.78□□□□□ -0.2
CLSTN1-201ENST00000361311 FCER1GP30273 86 aa13.78□□□□□ -0.2
CLSTN1-201ENST00000361311 LCN2P80188 198 aa13.78□□□□□ -0.2
CLSTN1-201ENST00000361311 CARFQ8N187 725 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 77.3 ms