RNA–Protein interactions for RNA: ENST00000225964.9

COL1A1-201, Transcript of collagen type I alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL1A1, Length 6,727 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-201ENST00000225964 ZNF501Q96CX3 271 aaPredicted RBP11.5□□□□□ -0.57
COL1A1-201ENST00000225964 PSG4Q00888 419 aa11.5□□□□□ -0.57
COL1A1-201ENST00000225964 KLF9Q13886 244 aaPredicted RBP11.5□□□□□ -0.57
COL1A1-201ENST00000225964 RAB37Q96AX2 223 aa11.5□□□□□ -0.57
COL1A1-201ENST00000225964 AURKAIP1Q9NWT8 199 aaPredicted RBP11.5□□□□□ -0.57
COL1A1-201ENST00000225964 hCG_38984A0A1B0GV85 526 aa11.5□□□□□ -0.57
COL1A1-201ENST00000225964 ARL6IP6Q8N6S5 226 aa11.5□□□□□ -0.57
COL1A1-201ENST00000225964 TMEM52Q8NDY8 209 aa11.5□□□□□ -0.57
COL1A1-201ENST00000225964 OR52M1Q8NGK5 317 aa11.5□□□□□ -0.57
COL1A1-201ENST00000225964 MS4A3Q96HJ5 214 aa11.5□□□□□ -0.57
COL1A1-201ENST00000225964 SLC25A33Q9BSK2 321 aa11.5□□□□□ -0.57
COL1A1-201ENST00000225964 A0A0J9YW62 118 aa11.5□□□□□ -0.57
COL1A1-201ENST00000225964 LEUTXA8MZ59 168 aa11.5□□□□□ -0.57
COL1A1-201ENST00000225964 XAF1Q6GPH4 301 aa11.5□□□□□ -0.57
COL1A1-201ENST00000225964 RSG1Q9BU20 258 aa11.5□□□□□ -0.57
COL1A1-201ENST00000225964 TUBA4BQ9H853 241 aa11.5□□□□□ -0.57
COL1A1-201ENST00000225964 ADAMTSL1Q8N6G6 1762 aa11.5□□□□□ -0.57
COL1A1-201ENST00000225964 NPIPB6E9PJ23 425 aa11.49□□□□□ -0.57
COL1A1-201ENST00000225964 AP4M1O00189 453 aa11.49□□□□□ -0.57
COL1A1-201ENST00000225964 HMGA2P52926 109 aa11.49□□□□□ -0.57
COL1A1-201ENST00000225964 RSPO4Q2I0M5 234 aaPredicted RBP11.49□□□□□ -0.57
COL1A1-201ENST00000225964 ATP1A1-AS1Q5TC04 95 aa11.49□□□□□ -0.57
COL1A1-201ENST00000225964 GCSAMQ8N6F7 178 aa11.49□□□□□ -0.57
COL1A1-201ENST00000225964 OR4C12Q96R67 309 aa11.49□□□□□ -0.57
COL1A1-201ENST00000225964 NEURL2Q9BR09 285 aa11.49□□□□□ -0.57
COL1A1-201ENST00000225964 DOCK5Q9H7D0 1870 aa11.49□□□□□ -0.57
COL1A1-201ENST00000225964 LOC105371242A0A075B767 164 aa11.49□□□□□ -0.57
COL1A1-201ENST00000225964 FOXS1O43638 330 aa11.49□□□□□ -0.57
COL1A1-201ENST00000225964 IL36RNQ9UBH0 155 aa11.49□□□□□ -0.57
COL1A1-201ENST00000225964 RNF115Q9Y4L5 304 aa11.49□□□□□ -0.57
COL1A1-201ENST00000225964 SNURFLB1AK76 121 aa11.49□□□□□ -0.57
COL1A1-201ENST00000225964 CEACAM21Q3KPI0 293 aa11.49□□□□□ -0.57
COL1A1-201ENST00000225964 PCSK4Q6UW60 755 aa11.49□□□□□ -0.57
COL1A1-201ENST00000225964 ZNF645Q8N7E2 425 aa11.49□□□□□ -0.57
COL1A1-201ENST00000225964 ABHD1Q96SE0 405 aa11.49□□□□□ -0.57
COL1A1-201ENST00000225964 CTDSPLO15194 276 aa11.49□□□□□ -0.57
COL1A1-201ENST00000225964 PNRC1Q12796 327 aaPredicted RBP11.49□□□□□ -0.57
COL1A1-201ENST00000225964 SPRED2Q7Z698 418 aa11.49□□□□□ -0.57
COL1A1-201ENST00000225964 SCN1AP35498 2009 aa11.49□□□□□ -0.57
COL1A1-201ENST00000225964 FAM106AQ4KMX7 169 aa11.49□□□□□ -0.57
COL1A1-201ENST00000225964 MIOXQ9UGB7 285 aa11.49□□□□□ -0.57
COL1A1-201ENST00000225964 FUT9Q9Y231 359 aa11.49□□□□□ -0.57
COL1A1-201ENST00000225964 M0R143 59 aa11.48□□□□□ -0.57
COL1A1-201ENST00000225964 GCGP01275 180 aa11.48□□□□□ -0.57
COL1A1-201ENST00000225964 CD81P60033 236 aa11.48□□□□□ -0.57
COL1A1-201ENST00000225964 IDI2-AS1Q9NZ38 188 aa11.48□□□□□ -0.57
COL1A1-201ENST00000225964 TMEM56-RWDD3S4R434 201 aa11.48□□□□□ -0.57
COL1A1-201ENST00000225964 PPIAL4CA0A0B4J2A2 164 aa11.48□□□□□ -0.57
COL1A1-201ENST00000225964 TMEM229AB2RXF0 380 aa11.48□□□□□ -0.57
COL1A1-201ENST00000225964 THY1P04216 161 aa11.48□□□□□ -0.57
COL1A1-201ENST00000225964 PPIAL4GP0DN37 164 aa11.48□□□□□ -0.57
COL1A1-201ENST00000225964 RPL24P83731 157 aaKnown RBP11.48□□□□□ -0.57
COL1A1-201ENST00000225964 RNF133Q8WVZ7 376 aa11.48□□□□□ -0.57
COL1A1-201ENST00000225964 PHYHIPLQ96FC7 376 aa11.48□□□□□ -0.57
COL1A1-201ENST00000225964 ATG101Q9BSB4 218 aa11.48□□□□□ -0.57
COL1A1-201ENST00000225964 SIRT7Q9NRC8 400 aa11.48□□□□□ -0.57
COL1A1-201ENST00000225964 LRP5O75197 1615 aa11.48□□□□□ -0.57
COL1A1-201ENST00000225964 TMEM262E9PQX1 116 aa11.48□□□□□ -0.57
COL1A1-201ENST00000225964 NMUP48645 174 aa11.48□□□□□ -0.57
COL1A1-201ENST00000225964 ZNF826PQ6ZT77 177 aa11.48□□□□□ -0.57
COL1A1-201ENST00000225964 RGP1Q92546 391 aaPredicted RBP11.48□□□□□ -0.57
COL1A1-201ENST00000225964 SCMH1Q96GD3 660 aa11.48□□□□□ -0.57
COL1A1-201ENST00000225964 OR2H2O95918 312 aa11.48□□□□□ -0.57
COL1A1-201ENST00000225964 PGA4P0DJD7 388 aa11.48□□□□□ -0.57
COL1A1-201ENST00000225964 PGA5P0DJD9 388 aa11.48□□□□□ -0.57
COL1A1-201ENST00000225964 SUCLG1P53597 346 aaKnown RBP11.48□□□□□ -0.57
COL1A1-201ENST00000225964 AWAT1Q58HT5 328 aa11.48□□□□□ -0.57
COL1A1-201ENST00000225964 SNX22Q96L94 193 aa11.48□□□□□ -0.57
COL1A1-201ENST00000225964 CD160O95971 181 aa11.48□□□□□ -0.57
COL1A1-201ENST00000225964 IGKV1D-16P01601 117 aa11.48□□□□□ -0.57
COL1A1-201ENST00000225964 FCGR2BP31994 310 aaPredicted RBP11.48□□□□□ -0.57
COL1A1-201ENST00000225964 P2RY6Q15077 328 aa11.48□□□□□ -0.57
COL1A1-201ENST00000225964 CA11O75493 328 aa11.47□□□□□ -0.57
COL1A1-201ENST00000225964 STAG3L2P0CL84 134 aa11.47□□□□□ -0.57
COL1A1-201ENST00000225964 MC5RP33032 325 aa11.47□□□□□ -0.57
COL1A1-201ENST00000225964 KLRB1Q12918 225 aa11.47□□□□□ -0.57
COL1A1-201ENST00000225964 MGST3O14880 152 aa11.47□□□□□ -0.57
COL1A1-201ENST00000225964 PLAUP00749 431 aa11.47□□□□□ -0.57
COL1A1-201ENST00000225964 ARF6P62330 175 aa11.47□□□□□ -0.57
COL1A1-201ENST00000225964 TGIF1Q15583 401 aa11.47□□□□□ -0.57
COL1A1-201ENST00000225964 ATG2BQ96BY7 2078 aa11.47□□□□□ -0.57
COL1A1-201ENST00000225964 TRAV8-7A0A075B6U6 113 aa11.47□□□□□ -0.57
COL1A1-201ENST00000225964 CXorf66Q5JRM2 361 aaPredicted RBP11.47□□□□□ -0.57
COL1A1-201ENST00000225964 SCNM1Q9BWG6 230 aa11.47□□□□□ -0.57
COL1A1-201ENST00000225964 PILRBQ9UKJ0 227 aa11.47□□□□□ -0.57
COL1A1-201ENST00000225964 PXMP4Q9Y6I8 212 aa11.47□□□□□ -0.57
COL1A1-201ENST00000225964 STPG3Q8N7X2 389 aa11.47□□□□□ -0.57
COL1A1-201ENST00000225964 TLNRD1Q9H1K6 362 aa11.47□□□□□ -0.57
COL1A1-201ENST00000225964 SHANK3Q9BYB0 1731 aa11.47□□□□□ -0.57
COL1A1-201ENST00000225964 IFNL4K9M1U5 179 aa11.46□□□□□ -0.57
COL1A1-201ENST00000225964 REG1AP05451 166 aa11.46□□□□□ -0.57
COL1A1-201ENST00000225964 UNQ9370/PRO34162Q6UXP9 181 aa11.46□□□□□ -0.57
COL1A1-201ENST00000225964 OR5AU1Q8NGC0 362 aa11.46□□□□□ -0.57
COL1A1-201ENST00000225964 LINC01560Q8TB33 94 aa11.46□□□□□ -0.57
COL1A1-201ENST00000225964 TDRD15B5MCY1 1934 aaKnown RBP11.46□□□□□ -0.57
COL1A1-201ENST00000225964 HMSDA8MTL9 139 aa11.46□□□□□ -0.57
COL1A1-201ENST00000225964 PITX3O75364 302 aa11.46□□□□□ -0.57
COL1A1-201ENST00000225964 FCGR3AP08637 254 aa11.46□□□□□ -0.57
COL1A1-201ENST00000225964 VSIG8P0DPA2 414 aa11.46□□□□□ -0.57
COL1A1-201ENST00000225964 MMP9P14780 707 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 78.8 ms