RNA–Protein interactions for RNA: ENST00000622697.4

GABRB3-215, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 5 BASIC

Gene GABRB3, Length 5,876 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-215ENST00000622697 DUXBA0A1W2PPF3 345 aa13.97□□□□□ -0.17
GABRB3-215ENST00000622697 OR2A4O95047 310 aa13.97□□□□□ -0.17
GABRB3-215ENST00000622697 OR2A7Q96R45 310 aa13.97□□□□□ -0.17
GABRB3-215ENST00000622697 FUT9Q9Y231 359 aa13.97□□□□□ -0.17
GABRB3-215ENST00000622697 PNRC1Q12796 327 aaPredicted RBP13.96□□□□□ -0.17
GABRB3-215ENST00000622697 DHRS7BQ6IAN0 325 aaPredicted RBP13.96□□□□□ -0.17
GABRB3-215ENST00000622697 GAL3ST2Q9H3Q3 398 aa13.96□□□□□ -0.17
GABRB3-215ENST00000622697 PITX3O75364 302 aa13.96□□□□□ -0.17
GABRB3-215ENST00000622697 LY86O95711 162 aa13.96□□□□□ -0.17
GABRB3-215ENST00000622697 FDX2Q6P4F2 183 aa13.96□□□□□ -0.17
GABRB3-215ENST00000622697 TMEM14DPA8MWL7 114 aa13.96□□□□□ -0.17
GABRB3-215ENST00000622697 FAM157AC9JC47 383 aa13.96□□□□□ -0.17
GABRB3-215ENST00000622697 COX6A1P12074 109 aa13.96□□□□□ -0.17
GABRB3-215ENST00000622697 IQCJQ1A5X6 159 aa13.96□□□□□ -0.17
GABRB3-215ENST00000622697 RND1Q92730 232 aa13.96□□□□□ -0.17
GABRB3-215ENST00000622697 MTCL1Q9Y4B5 1905 aaKnown RBP13.96□□□□□ -0.18
GABRB3-215ENST00000622697 FCER1GP30273 86 aa13.96□□□□□ -0.18
GABRB3-215ENST00000622697 HFEQ30201 348 aa13.96□□□□□ -0.18
GABRB3-215ENST00000622697 CDCP2Q5VXM1 449 aa13.96□□□□□ -0.18
GABRB3-215ENST00000622697 OR2T6Q8NHC8 308 aa13.96□□□□□ -0.18
GABRB3-215ENST00000622697 SDK2Q58EX2 2172 aa13.95□□□□□ -0.18
GABRB3-215ENST00000622697 TMEM265A0A087WTH1 108 aa13.95□□□□□ -0.18
GABRB3-215ENST00000622697 PRR32B1ATL7 298 aa13.95□□□□□ -0.18
GABRB3-215ENST00000622697 FOSL1P15407 271 aa13.95□□□□□ -0.18
GABRB3-215ENST00000622697 RPL29P47914 159 aaKnown RBP13.95□□□□□ -0.18
GABRB3-215ENST00000622697 UBE2L3P68036 154 aaKnown RBP13.95□□□□□ -0.18
GABRB3-215ENST00000622697 PCOLCEQ15113 449 aa13.95□□□□□ -0.18
GABRB3-215ENST00000622697 SLC35E3Q7Z769 313 aa13.95□□□□□ -0.18
GABRB3-215ENST00000622697 OR1B1Q8NGR6 318 aa13.95□□□□□ -0.18
GABRB3-215ENST00000622697 IER2Q9BTL4 223 aa13.95□□□□□ -0.18
GABRB3-215ENST00000622697 TMEM222Q9H0R3 208 aa13.95□□□□□ -0.18
GABRB3-215ENST00000622697 Q9N2K0 584 aa13.95□□□□□ -0.18
GABRB3-215ENST00000622697 MIOXQ9UGB7 285 aa13.95□□□□□ -0.18
GABRB3-215ENST00000622697 SEC14L6B5MCN3 397 aa13.95□□□□□ -0.18
GABRB3-215ENST00000622697 PPIHO43447 177 aaKnown RBP13.95□□□□□ -0.18
GABRB3-215ENST00000622697 FGF5P12034 268 aa13.95□□□□□ -0.18
GABRB3-215ENST00000622697 BTCP35070 178 aa13.95□□□□□ -0.18
GABRB3-215ENST00000622697 TGIF2LXQ8IUE1 241 aa13.95□□□□□ -0.18
GABRB3-215ENST00000622697 LOC102723971A0A1B0GUV8 181 aa13.95□□□□□ -0.18
GABRB3-215ENST00000622697 REG1BP48304 166 aa13.95□□□□□ -0.18
GABRB3-215ENST00000622697 TNXAQ16473 311 aa13.95□□□□□ -0.18
GABRB3-215ENST00000622697 RPEL1Q2QD12 228 aa13.95□□□□□ -0.18
GABRB3-215ENST00000622697 Q56UQ5 140 aa13.95□□□□□ -0.18
GABRB3-215ENST00000622697 LDLRAD3Q86YD5 345 aa13.95□□□□□ -0.18
GABRB3-215ENST00000622697 OR1L4Q8NGR5 311 aa13.95□□□□□ -0.18
GABRB3-215ENST00000622697 RARRES2Q99969 163 aa13.95□□□□□ -0.18
GABRB3-215ENST00000622697 GLRX2Q9NS18 164 aa13.95□□□□□ -0.18
GABRB3-215ENST00000622697 SRCAPQ6ZRS2 3230 aa13.95□□□□□ -0.18
GABRB3-215ENST00000622697 CD74P04233 296 aa13.95□□□□□ -0.18
GABRB3-215ENST00000622697 LINC00114Q6XXX2 140 aa13.95□□□□□ -0.18
GABRB3-215ENST00000622697 MRPL30Q8TCC3 161 aaKnown RBP13.95□□□□□ -0.18
GABRB3-215ENST00000622697 MANBALQ9NQG1 85 aa13.95□□□□□ -0.18
GABRB3-215ENST00000622697 OR2H2O95918 312 aa13.95□□□□□ -0.18
GABRB3-215ENST00000622697 PRF1P14222 555 aa13.95□□□□□ -0.18
GABRB3-215ENST00000622697 KIR2DS2P43631 304 aa13.95□□□□□ -0.18
GABRB3-215ENST00000622697 TGIF1Q15583 401 aa13.95□□□□□ -0.18
GABRB3-215ENST00000622697 NOL4LQ96MY1 436 aaPredicted RBP13.95□□□□□ -0.18
GABRB3-215ENST00000622697 GZMHP20718 246 aa13.94□□□□□ -0.18
GABRB3-215ENST00000622697 KHDC1LQ5JSQ8 128 aa13.94□□□□□ -0.18
GABRB3-215ENST00000622697 PACRGQ96M98 296 aaPredicted RBP13.94□□□□□ -0.18
GABRB3-215ENST00000622697 RTN4RQ9BZR6 473 aa13.94□□□□□ -0.18
GABRB3-215ENST00000622697 MRGPRGQ86SM5 289 aa13.94□□□□□ -0.18
GABRB3-215ENST00000622697 LRRC75AQ8NAA5 344 aa13.94□□□□□ -0.18
GABRB3-215ENST00000622697 OR10A7Q8NGE5 316 aa13.94□□□□□ -0.18
GABRB3-215ENST00000622697 ATP1A1-AS1Q5TC04 95 aa13.94□□□□□ -0.18
GABRB3-215ENST00000622697 BCL2L2Q92843 193 aaPredicted RBP13.94□□□□□ -0.18
GABRB3-215ENST00000622697 Q96M66 194 aa13.94□□□□□ -0.18
GABRB3-215ENST00000622697 MESP1Q9BRJ9 268 aa13.94□□□□□ -0.18
GABRB3-215ENST00000622697 IGHMP01871 453 aa13.94□□□□□ -0.18
GABRB3-215ENST00000622697 LYZP61626 148 aa13.94□□□□□ -0.18
GABRB3-215ENST00000622697 GMPPAQ96IJ6 420 aaPredicted RBP13.94□□□□□ -0.18
GABRB3-215ENST00000622697 NDFIP1Q9BT67 221 aa13.94□□□□□ -0.18
GABRB3-215ENST00000622697 ZDBF2Q9HCK1 2354 aa13.93□□□□□ -0.18
GABRB3-215ENST00000622697 OR10G8Q8NGN5 311 aa13.93□□□□□ -0.18
GABRB3-215ENST00000622697 CHRDL1Q9BU40 450 aa13.93□□□□□ -0.18
GABRB3-215ENST00000622697 COLQQ9Y215 455 aaPredicted RBP13.93□□□□□ -0.18
GABRB3-215ENST00000622697 RTTNQ86VV8 2226 aa13.93□□□□□ -0.18
GABRB3-215ENST00000622697 ZNF98A6NK75 572 aa13.93□□□□□ -0.18
GABRB3-215ENST00000622697 GATCO43716 136 aaKnown RBP13.93□□□□□ -0.18
GABRB3-215ENST00000622697 POM121Q96HA1 1249 aa13.93□□□□□ -0.18
GABRB3-215ENST00000622697 WNT5BQ9H1J7 359 aa13.93□□□□□ -0.18
GABRB3-215ENST00000622697 FKBP11Q9NYL4 201 aa13.93□□□□□ -0.18
GABRB3-215ENST00000622697 IGHV3-21A0A0B4J1V1 117 aa13.93□□□□□ -0.18
GABRB3-215ENST00000622697 RFPL3SP0C7P2 107 aa13.93□□□□□ -0.18
GABRB3-215ENST00000622697 UCP2P55851 309 aa13.93□□□□□ -0.18
GABRB3-215ENST00000622697 AQP10Q96PS8 301 aa13.93□□□□□ -0.18
GABRB3-215ENST00000622697 ZNF785A8K8V0 405 aa13.93□□□□□ -0.18
GABRB3-215ENST00000622697 B4E171 279 aa13.93□□□□□ -0.18
GABRB3-215ENST00000622697 PGLYRP1O75594 196 aaPredicted RBP13.93□□□□□ -0.18
GABRB3-215ENST00000622697 HBZP02008 142 aa13.93□□□□□ -0.18
GABRB3-215ENST00000622697 TSPAN7P41732 249 aa13.93□□□□□ -0.18
GABRB3-215ENST00000622697 B2MP61769 119 aa13.93□□□□□ -0.18
GABRB3-215ENST00000622697 INO80CQ6PI98 192 aaPredicted RBP13.93□□□□□ -0.18
GABRB3-215ENST00000622697 DNASE2BQ8WZ79 361 aa13.93□□□□□ -0.18
GABRB3-215ENST00000622697 OPN3Q9H1Y3 402 aaPredicted RBP13.93□□□□□ -0.18
GABRB3-215ENST00000622697 ZNF665Q9H7R5 613 aa13.93□□□□□ -0.18
GABRB3-215ENST00000622697 PRDM6Q9NQX0 595 aa13.93□□□□□ -0.18
GABRB3-215ENST00000622697 PILRBQ9UKJ0 227 aa13.93□□□□□ -0.18
GABRB3-215ENST00000622697 MSGN1A6NI15 193 aa13.92□□□□□ -0.18
GABRB3-215ENST00000622697 MPTX1A8MV57 137 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms