RNA–Protein interactions for RNA: ENST00000597968.1

TRIM28-211, Transcript of tripartite motif containing 28, humanhuman

TSL 2

Gene TRIM28, Length 504 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-211ENST00000597968 HTD2P86397 168 aa10.68□□□□□ -0.7
TRIM28-211ENST00000597968 FHL3Q13643 280 aa10.68□□□□□ -0.7
TRIM28-211ENST00000597968 RAB12Q6IQ22 244 aa10.68□□□□□ -0.7
TRIM28-211ENST00000597968 LAIR2Q6ISS4 152 aa10.68□□□□□ -0.7
TRIM28-211ENST00000597968 DHRSXQ8N5I4 330 aa10.68□□□□□ -0.7
TRIM28-211ENST00000597968 PACRGLQ8N7B6 248 aa10.68□□□□□ -0.7
TRIM28-211ENST00000597968 ZNF485Q8NCK3 441 aa10.68□□□□□ -0.7
TRIM28-211ENST00000597968 CCDC107Q8WV48 283 aa10.68□□□□□ -0.7
TRIM28-211ENST00000597968 C4orf3Q8WVX3 66 aa10.68□□□□□ -0.7
TRIM28-211ENST00000597968 RAX2Q96IS3 184 aa10.68□□□□□ -0.7
TRIM28-211ENST00000597968 PGLYRP3Q96LB9 341 aa10.68□□□□□ -0.7
TRIM28-211ENST00000597968 CNOT2Q9NZN8 540 aaKnown RBP10.68□□□□□ -0.7
TRIM28-211ENST00000597968 LINC00527Q9UJ94 153 aa10.68□□□□□ -0.7
TRIM28-211ENST00000597968 MRPS28Q9Y2Q9 187 aaKnown RBP10.68□□□□□ -0.7
TRIM28-211ENST00000597968 IGHV3-72A0A0B4J1Y9 119 aa10.67□□□□□ -0.7
TRIM28-211ENST00000597968 PNMA8CA0A1B0GUJ8 204 aa10.67□□□□□ -0.7
TRIM28-211ENST00000597968 A0A1W2PP11 408 aa10.67□□□□□ -0.7
TRIM28-211ENST00000597968 MAGEA13PA6NCF6 341 aa10.67□□□□□ -0.7
TRIM28-211ENST00000597968 RGS11O94810 467 aa10.67□□□□□ -0.7
TRIM28-211ENST00000597968 HBZP02008 142 aa10.67□□□□□ -0.7
TRIM28-211ENST00000597968 RPLP1P05386 114 aaKnown RBP10.67□□□□□ -0.7
TRIM28-211ENST00000597968 UBBP0CG47 229 aa10.67□□□□□ -0.7
TRIM28-211ENST00000597968 PSMB8P28062 276 aa10.67□□□□□ -0.7
TRIM28-211ENST00000597968 VHLP40337 213 aa10.67□□□□□ -0.7
TRIM28-211ENST00000597968 RUNX1Q01196 453 aa10.67□□□□□ -0.7
TRIM28-211ENST00000597968 ST3GAL4Q11206 333 aa10.67□□□□□ -0.7
TRIM28-211ENST00000597968 CT45A1Q5HYN5 189 aa10.67□□□□□ -0.7
TRIM28-211ENST00000597968 AWAT2Q6E213 333 aa10.67□□□□□ -0.7
TRIM28-211ENST00000597968 FAM71F2Q6NXP2 309 aa10.67□□□□□ -0.7
TRIM28-211ENST00000597968 GLIPR1L1Q6UWM5 242 aa10.67□□□□□ -0.7
TRIM28-211ENST00000597968 JAGN1Q8N5M9 183 aa10.67□□□□□ -0.7
TRIM28-211ENST00000597968 CT45A3Q8NHU0 189 aa10.67□□□□□ -0.7
TRIM28-211ENST00000597968 MYOZ3Q8TDC0 251 aa10.67□□□□□ -0.7
TRIM28-211ENST00000597968 UBE2E2Q96LR5 201 aa10.67□□□□□ -0.7
TRIM28-211ENST00000597968 CST11Q9H112 138 aa10.67□□□□□ -0.7
TRIM28-211ENST00000597968 GHITMQ9H3K2 345 aa10.67□□□□□ -0.7
TRIM28-211ENST00000597968 KCNIP1Q9NZI2 227 aa10.67□□□□□ -0.7
TRIM28-211ENST00000597968 PEX16Q9Y5Y5 336 aa10.67□□□□□ -0.7
TRIM28-211ENST00000597968 TRAV8-7A0A075B6U6 113 aa10.66□□□□□ -0.7
TRIM28-211ENST00000597968 EFCAB10A6NFE3 127 aa10.66□□□□□ -0.7
TRIM28-211ENST00000597968 LINC01548A6NM66 108 aa10.66□□□□□ -0.7
TRIM28-211ENST00000597968 YPEL1O60688 119 aa10.66□□□□□ -0.7
TRIM28-211ENST00000597968 HLA-DRB1P01911 266 aa10.66□□□□□ -0.7
TRIM28-211ENST00000597968 MGMTP16455 207 aa10.66□□□□□ -0.7
TRIM28-211ENST00000597968 ZNF134P52741 427 aa10.66□□□□□ -0.7
TRIM28-211ENST00000597968 LSAMPQ13449 338 aa10.66□□□□□ -0.7
TRIM28-211ENST00000597968 MORN2Q502X0 79 aa10.66□□□□□ -0.7
TRIM28-211ENST00000597968 LCNL1Q6ZST4 164 aa10.66□□□□□ -0.7
TRIM28-211ENST00000597968 C18orf65Q6ZTR6 163 aa10.66□□□□□ -0.7
TRIM28-211ENST00000597968 LYPD6Q86Y78 171 aa10.66□□□□□ -0.7
TRIM28-211ENST00000597968 Q96M66 194 aa10.66□□□□□ -0.7
TRIM28-211ENST00000597968 YPEL2Q96QA6 119 aa10.66□□□□□ -0.7
TRIM28-211ENST00000597968 TAF9BQ9HBM6 251 aa10.66□□□□□ -0.7
TRIM28-211ENST00000597968 OR2S2Q9NQN1 319 aa10.66□□□□□ -0.7
TRIM28-211ENST00000597968 ZNF107Q9UII5 783 aaPredicted RBP10.66□□□□□ -0.7
TRIM28-211ENST00000597968 LSM4Q9Y4Z0 139 aaKnown RBP10.66□□□□□ -0.7
TRIM28-211ENST00000597968 IGHV3-43A0A0B4J1X8 118 aa10.65□□□□□ -0.7
TRIM28-211ENST00000597968 PDCD6O75340 191 aa10.65□□□□□ -0.7
TRIM28-211ENST00000597968 IGHV3-43DP0DP04 118 aa10.65□□□□□ -0.7
TRIM28-211ENST00000597968 PPIFP30405 207 aaKnown RBP10.65□□□□□ -0.7
TRIM28-211ENST00000597968 F2RL1P55085 397 aa10.65□□□□□ -0.7
TRIM28-211ENST00000597968 FAM53AQ6NSI3 398 aaPredicted RBP10.65□□□□□ -0.7
TRIM28-211ENST00000597968 C11orf87Q6NUJ2 197 aa10.65□□□□□ -0.7
TRIM28-211ENST00000597968 OR4K15Q8NH41 348 aa10.65□□□□□ -0.7
TRIM28-211ENST00000597968 UBALD1Q8TB05 177 aa10.65□□□□□ -0.7
TRIM28-211ENST00000597968 MUL1Q969V5 352 aa10.65□□□□□ -0.7
TRIM28-211ENST00000597968 CYYR1Q96J86 154 aa10.65□□□□□ -0.7
TRIM28-211ENST00000597968 KCTD7Q96MP8 289 aa10.65□□□□□ -0.7
TRIM28-211ENST00000597968 DERL3Q96Q80 235 aa10.65□□□□□ -0.7
TRIM28-211ENST00000597968 OR14A2Q96R54 314 aa10.65□□□□□ -0.7
TRIM28-211ENST00000597968 ABHD14AQ9BUJ0 271 aa10.65□□□□□ -0.7
TRIM28-211ENST00000597968 SELENOIQ9C0D9 397 aa10.65□□□□□ -0.7
TRIM28-211ENST00000597968 ERGIC3Q9Y282 383 aa10.65□□□□□ -0.7
TRIM28-211ENST00000597968 SLC31A2O15432 143 aa10.64□□□□□ -0.71
TRIM28-211ENST00000597968 CRTAPO75718 401 aaPredicted RBP10.64□□□□□ -0.71
TRIM28-211ENST00000597968 OR8U8P0C7N1 319 aa10.64□□□□□ -0.71
TRIM28-211ENST00000597968 RCC1P18754 421 aaPredicted RBP10.64□□□□□ -0.71
TRIM28-211ENST00000597968 MMDQ15546 238 aa10.64□□□□□ -0.71
TRIM28-211ENST00000597968 OGFRL1Q5TC84 451 aaPredicted RBP10.64□□□□□ -0.71
TRIM28-211ENST00000597968 TMEM65Q6PI78 240 aa10.64□□□□□ -0.71
TRIM28-211ENST00000597968 AHSA2Q719I0 299 aa10.64□□□□□ -0.71
TRIM28-211ENST00000597968 MS4A15Q8N5U1 240 aa10.64□□□□□ -0.71
TRIM28-211ENST00000597968 TCTEX1D1Q8N7M0 179 aa10.64□□□□□ -0.71
TRIM28-211ENST00000597968 BPIFB6Q8NFQ5 453 aa10.64□□□□□ -0.71
TRIM28-211ENST00000597968 GALMQ96C23 342 aa10.64□□□□□ -0.71
TRIM28-211ENST00000597968 HSPB9Q9BQS6 159 aa10.64□□□□□ -0.71
TRIM28-211ENST00000597968 PLCXD1Q9NUJ7 323 aa10.64□□□□□ -0.71
TRIM28-211ENST00000597968 PIPOXQ9P0Z9 390 aa10.64□□□□□ -0.71
TRIM28-211ENST00000597968 ZNF736B4DX44 427 aaPredicted RBP10.63□□□□□ -0.71
TRIM28-211ENST00000597968 SEC14L6B5MCN3 397 aa10.63□□□□□ -0.71
TRIM28-211ENST00000597968 ITGB1BP1O14713 200 aa10.63□□□□□ -0.71
TRIM28-211ENST00000597968 MYL12BO14950 172 aa10.63□□□□□ -0.71
TRIM28-211ENST00000597968 IGLV1-40P01703 118 aa10.63□□□□□ -0.71
TRIM28-211ENST00000597968 MAS1P04201 325 aa10.63□□□□□ -0.71
TRIM28-211ENST00000597968 CELP19835 753 aa10.63□□□□□ -0.71
TRIM28-211ENST00000597968 RANBP1P43487 201 aa10.63□□□□□ -0.71
TRIM28-211ENST00000597968 WNT4P56705 351 aa10.63□□□□□ -0.71
TRIM28-211ENST00000597968 RAB25P57735 213 aa10.63□□□□□ -0.71
TRIM28-211ENST00000597968 C6orf141Q5SZD1 244 aa10.63□□□□□ -0.71
TRIM28-211ENST00000597968 RNLSQ5VYX0 342 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms