RNA–Protein interactions for RNA: ENST00000593946.5

PNKP-203, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 1 (best)

Gene PNKP, Length 1,723 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-203ENST00000593946 C17orf58Q2M2W7 97 aa17.21■□□□□ 0.35
PNKP-203ENST00000593946 LPCAT3Q6P1A2 487 aa17.21■□□□□ 0.35
PNKP-203ENST00000593946 OR52L2PQ8NGH6 319 aa17.21■□□□□ 0.35
PNKP-203ENST00000593946 RFESDQ8TAC1 157 aa17.21■□□□□ 0.35
PNKP-203ENST00000593946 SECTM1Q8WVN6 248 aa17.21■□□□□ 0.35
PNKP-203ENST00000593946 PARP12Q9H0J9 701 aaKnown RBP17.21■□□□□ 0.35
PNKP-203ENST00000593946 SLC2A9Q9NRM0 540 aa17.21■□□□□ 0.35
PNKP-203ENST00000593946 LINC00312Q9Y6C7 94 aa17.21■□□□□ 0.35
PNKP-203ENST00000593946 MALRD1Q5VYJ5 2156 aa17.2■□□□□ 0.34
PNKP-203ENST00000593946 SPG11Q96JI7 2443 aa17.2■□□□□ 0.34
PNKP-203ENST00000593946 F2RL2O00254 374 aa17.2■□□□□ 0.34
PNKP-203ENST00000593946 PIGPP57054 158 aa17.2■□□□□ 0.34
PNKP-203ENST00000593946 GNMTQ14749 295 aa17.2■□□□□ 0.34
PNKP-203ENST00000593946 TMEM155Q4W5P6 130 aa17.2■□□□□ 0.34
PNKP-203ENST00000593946 CCL19Q99731 98 aa17.2■□□□□ 0.34
PNKP-203ENST00000593946 SLC5A7Q9GZV3 580 aa17.2■□□□□ 0.34
PNKP-203ENST00000593946 LINC00574Q9H8X3 128 aa17.2■□□□□ 0.34
PNKP-203ENST00000593946 KBTBD11-OT1A0A1B0GTJ5 212 aa17.19■□□□□ 0.34
PNKP-203ENST00000593946 hADV38S2A0JD32 116 aa17.19■□□□□ 0.34
PNKP-203ENST00000593946 CRYM-AS1A6NIL9 109 aa17.19■□□□□ 0.34
PNKP-203ENST00000593946 A8MV72 311 aaPredicted RBP17.19■□□□□ 0.34
PNKP-203ENST00000593946 DUS4LO95620 317 aaKnown RBP17.19■□□□□ 0.34
PNKP-203ENST00000593946 CXCL3P19876 107 aa17.19■□□□□ 0.34
PNKP-203ENST00000593946 RPL31P62899 125 aaKnown RBP17.19■□□□□ 0.34
PNKP-203ENST00000593946 ABCA11PQ4W5N1 156 aa17.19■□□□□ 0.34
PNKP-203ENST00000593946 ZNF295-AS1Q8N0V1 137 aa17.19■□□□□ 0.34
PNKP-203ENST00000593946 OR10V1Q8NGI7 309 aa17.19■□□□□ 0.34
PNKP-203ENST00000593946 MITD1Q8WV92 249 aa17.19■□□□□ 0.34
PNKP-203ENST00000593946 RAB9BQ9NP90 201 aa17.19■□□□□ 0.34
PNKP-203ENST00000593946 OR2S2Q9NQN1 319 aa17.19■□□□□ 0.34
PNKP-203ENST00000593946 C19orf12Q9NSK7 152 aa17.19■□□□□ 0.34
PNKP-203ENST00000593946 CLN8Q9UBY8 286 aa17.19■□□□□ 0.34
PNKP-203ENST00000593946 UBE2J1Q9Y385 318 aaPredicted RBP17.19■□□□□ 0.34
PNKP-203ENST00000593946 ARID1AO14497 2285 aa17.19■□□□□ 0.34
PNKP-203ENST00000593946 DOPEY2Q9Y3R5 2298 aa17.19■□□□□ 0.34
PNKP-203ENST00000593946 ZNF729A6NN14 1252 aaPredicted RBP17.18■□□□□ 0.34
PNKP-203ENST00000593946 SFT2D2O95562 160 aa17.18■□□□□ 0.34
PNKP-203ENST00000593946 CD83Q01151 205 aa17.18■□□□□ 0.34
PNKP-203ENST00000593946 PHLDA2Q53GA4 152 aa17.18■□□□□ 0.34
PNKP-203ENST00000593946 FAM53AQ6NSI3 398 aaPredicted RBP17.18■□□□□ 0.34
PNKP-203ENST00000593946 ZNF841Q6ZN19 808 aa17.18■□□□□ 0.34
PNKP-203ENST00000593946 ZNF818PQ6ZRF7 136 aa17.18■□□□□ 0.34
PNKP-203ENST00000593946 C12orf45Q8N5I9 185 aaPredicted RBP17.18■□□□□ 0.34
PNKP-203ENST00000593946 SPICQ8N5J4 248 aa17.18■□□□□ 0.34
PNKP-203ENST00000593946 NINJ1Q92982 152 aa17.18■□□□□ 0.34
PNKP-203ENST00000593946 LPAR3Q9UBY5 353 aa17.18■□□□□ 0.34
PNKP-203ENST00000593946 JPT1Q9UK76 154 aa17.18■□□□□ 0.34
PNKP-203ENST00000593946 CENPEQ02224 2701 aa17.18■□□□□ 0.34
PNKP-203ENST00000593946 PPP1CCP36873 323 aaKnown RBP17.18■□□□□ 0.34
PNKP-203ENST00000593946 LUMP51884 338 aaPredicted RBP17.18■□□□□ 0.34
PNKP-203ENST00000593946 LOXL3P58215 753 aa17.18■□□□□ 0.34
PNKP-203ENST00000593946 OR2AK2Q8NG84 335 aa17.18■□□□□ 0.34
PNKP-203ENST00000593946 RTN4IP1Q8WWV3 396 aaPredicted RBP17.18■□□□□ 0.34
PNKP-203ENST00000593946 RANGRFQ9HD47 186 aaPredicted RBP17.18■□□□□ 0.34
PNKP-203ENST00000593946 TAS2R3Q9NYW6 316 aa17.18■□□□□ 0.34
PNKP-203ENST00000593946 MIOXQ9UGB7 285 aa17.18■□□□□ 0.34
PNKP-203ENST00000593946 IGHV3-43A0A0B4J1X8 118 aa17.17■□□□□ 0.34
PNKP-203ENST00000593946 GPR31O00270 319 aa17.17■□□□□ 0.34
PNKP-203ENST00000593946 IGHV3-43DP0DP04 118 aa17.17■□□□□ 0.34
PNKP-203ENST00000593946 RND3P61587 244 aa17.17■□□□□ 0.34
PNKP-203ENST00000593946 ZNF273Q14593 569 aa17.17■□□□□ 0.34
PNKP-203ENST00000593946 SGPP2Q8IWX5 399 aa17.17■□□□□ 0.34
PNKP-203ENST00000593946 FAM185AQ8N0U4 392 aa17.17■□□□□ 0.34
PNKP-203ENST00000593946 CASTOR1Q8WTX7 329 aa17.17■□□□□ 0.34
PNKP-203ENST00000593946 H1FXQ92522 213 aaKnown RBP17.17■□□□□ 0.34
PNKP-203ENST00000593946 CCL28Q9NRJ3 127 aa17.17■□□□□ 0.34
PNKP-203ENST00000593946 CELSR2Q9HCU4 2923 aa17.16■□□□□ 0.34
PNKP-203ENST00000593946 BOLA2-SMG1P6H3BVE0 249 aa17.16■□□□□ 0.34
PNKP-203ENST00000593946 IGHV4-39P01824 125 aa17.16■□□□□ 0.34
PNKP-203ENST00000593946 HNRNPCP07910 306 aaKnown RBP eCLIP17.16■□□□□ 0.34
PNKP-203ENST00000593946 CD34P28906 385 aa17.16■□□□□ 0.34
PNKP-203ENST00000593946 TMEM200BQ69YZ2 307 aa17.16■□□□□ 0.34
PNKP-203ENST00000593946 CCDC71LQ8N9Z2 235 aa17.16■□□□□ 0.34
PNKP-203ENST00000593946 FAM210AQ96ND0 272 aa17.16■□□□□ 0.34
PNKP-203ENST00000593946 FYTTD1Q96QD9 318 aaKnown RBP17.16■□□□□ 0.34
PNKP-203ENST00000593946 PHB2Q99623 299 aa17.16■□□□□ 0.34
PNKP-203ENST00000593946 MGAT4CQ9UBM8 478 aa17.16■□□□□ 0.34
PNKP-203ENST00000593946 TEX13DA0A0J9YY54 714 aaPredicted RBP17.16■□□□□ 0.34
PNKP-203ENST00000593946 WNT2P09544 360 aa17.16■□□□□ 0.34
PNKP-203ENST00000593946 OR8U9P0C7N5 309 aa17.16■□□□□ 0.34
PNKP-203ENST00000593946 OMGP23515 440 aa17.16■□□□□ 0.34
PNKP-203ENST00000593946 GPR6P46095 362 aaPredicted RBP17.16■□□□□ 0.34
PNKP-203ENST00000593946 SLC9A3R2Q15599 337 aa17.16■□□□□ 0.34
PNKP-203ENST00000593946 LTC4SQ16873 150 aa17.16■□□□□ 0.34
PNKP-203ENST00000593946 C2orf68Q2NKX9 166 aa17.16■□□□□ 0.34
PNKP-203ENST00000593946 NLRC3Q7RTR2 1065 aa17.16■□□□□ 0.34
PNKP-203ENST00000593946 UXS1Q8NBZ7 420 aa17.16■□□□□ 0.34
PNKP-203ENST00000593946 BVESQ8NE79 360 aa17.16■□□□□ 0.34
PNKP-203ENST00000593946 OR8B3Q8NGG8 313 aa17.16■□□□□ 0.34
PNKP-203ENST00000593946 OR8U1Q8NH10 309 aa17.16■□□□□ 0.34
PNKP-203ENST00000593946 NEIL1Q96FI4 390 aaPredicted RBP17.16■□□□□ 0.34
PNKP-203ENST00000593946 GALNT14Q96FL9 552 aa17.16■□□□□ 0.34
PNKP-203ENST00000593946 OR8B2Q96RD0 313 aa17.16■□□□□ 0.34
PNKP-203ENST00000593946 NAA60Q9H7X0 242 aa17.16■□□□□ 0.34
PNKP-203ENST00000593946 GNG12Q9UBI6 72 aa17.16■□□□□ 0.34
PNKP-203ENST00000593946 FBN2P35556 2912 aa17.15■□□□□ 0.34
PNKP-203ENST00000593946 TRBV23-1A0A0A0MS06 115 aa17.15■□□□□ 0.34
PNKP-203ENST00000593946 HSD17B6O14756 317 aa17.15■□□□□ 0.34
PNKP-203ENST00000593946 GPR37O15354 613 aa17.15■□□□□ 0.34
PNKP-203ENST00000593946 YPEL1O60688 119 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms