RNA–Protein interactions for RNA: ENST00000548825.6

PRPF40B-209, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS P2 TSL 5 BASIC

Gene PRPF40B, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-209ENST00000548825 ZGRF1Q86YA3 2104 aa11.63□□□□□ -0.55
PRPF40B-209ENST00000548825 NECAP1Q8NC96 275 aa11.63□□□□□ -0.55
PRPF40B-209ENST00000548825 LILRB1Q8NHL6 650 aaPredicted RBP11.63□□□□□ -0.55
PRPF40B-209ENST00000548825 PLPPR1Q8TBJ4 325 aa11.63□□□□□ -0.55
PRPF40B-209ENST00000548825 SLC25A31Q9H0C2 315 aa11.63□□□□□ -0.55
PRPF40B-209ENST00000548825 UBE2L5PA0A1B0GUS4 154 aa11.63□□□□□ -0.55
PRPF40B-209ENST00000548825 VDAC1P21796 283 aa11.63□□□□□ -0.55
PRPF40B-209ENST00000548825 OR8G1Q15617 311 aa11.63□□□□□ -0.55
PRPF40B-209ENST00000548825 DHRS7BQ6IAN0 325 aaPredicted RBP11.63□□□□□ -0.55
PRPF40B-209ENST00000548825 FIP1L1Q6UN15 594 aaKnown RBP11.63□□□□□ -0.55
PRPF40B-209ENST00000548825 ATP23Q9Y6H3 246 aa11.63□□□□□ -0.55
PRPF40B-209ENST00000548825 SMCO3A2RU48 225 aa11.62□□□□□ -0.55
PRPF40B-209ENST00000548825 TIMM8AO60220 97 aaPredicted RBP11.62□□□□□ -0.55
PRPF40B-209ENST00000548825 GAPDHP04406 335 aaKnown RBP11.62□□□□□ -0.55
PRPF40B-209ENST00000548825 F2RP25116 425 aa11.62□□□□□ -0.55
PRPF40B-209ENST00000548825 PPP1CBP62140 327 aa11.62□□□□□ -0.55
PRPF40B-209ENST00000548825 DAZAP2Q15038 168 aaPredicted RBP11.62□□□□□ -0.55
PRPF40B-209ENST00000548825 SCCPDHQ8NBX0 429 aa11.62□□□□□ -0.55
PRPF40B-209ENST00000548825 OR52L2PQ8NGH6 319 aa11.62□□□□□ -0.55
PRPF40B-209ENST00000548825 SDSLQ96GA7 329 aa11.62□□□□□ -0.55
PRPF40B-209ENST00000548825 SLC35B3Q9H1N7 401 aa11.62□□□□□ -0.55
PRPF40B-209ENST00000548825 VSIRQ9H7M9 311 aa11.62□□□□□ -0.55
PRPF40B-209ENST00000548825 SPRR3Q9UBC9 169 aa11.62□□□□□ -0.55
PRPF40B-209ENST00000548825 KLF13Q9Y2Y9 288 aaPredicted RBP11.62□□□□□ -0.55
PRPF40B-209ENST00000548825 G6PCP35575 357 aa11.62□□□□□ -0.55
PRPF40B-209ENST00000548825 OR1L1Q8NH94 360 aa11.62□□□□□ -0.55
PRPF40B-209ENST00000548825 MRPL30Q8TCC3 161 aaKnown RBP11.62□□□□□ -0.55
PRPF40B-209ENST00000548825 HIST1H2BAQ96A08 127 aa11.62□□□□□ -0.55
PRPF40B-209ENST00000548825 PSENENQ9NZ42 101 aa11.62□□□□□ -0.55
PRPF40B-209ENST00000548825 ZNF391Q9UJN7 358 aa11.62□□□□□ -0.55
PRPF40B-209ENST00000548825 OR2W1Q9Y3N9 320 aa11.62□□□□□ -0.55
PRPF40B-209ENST00000548825 SPENQ96T58 3664 aaKnown RBP11.62□□□□□ -0.55
PRPF40B-209ENST00000548825 CD5P06127 495 aa11.62□□□□□ -0.55
PRPF40B-209ENST00000548825 SEC11BP0C7V7 166 aa11.62□□□□□ -0.55
PRPF40B-209ENST00000548825 LYL1P12980 280 aa11.62□□□□□ -0.55
PRPF40B-209ENST00000548825 PMELP40967 661 aa11.62□□□□□ -0.55
PRPF40B-209ENST00000548825 FBXW9Q5XUX1 488 aa11.62□□□□□ -0.55
PRPF40B-209ENST00000548825 DEFB124Q8NES8 71 aa11.62□□□□□ -0.55
PRPF40B-209ENST00000548825 OR5A2Q8NGI9 324 aa11.62□□□□□ -0.55
PRPF40B-209ENST00000548825 NINJ1Q92982 152 aa11.62□□□□□ -0.55
PRPF40B-209ENST00000548825 ABHD14BQ96IU4 210 aa11.62□□□□□ -0.55
PRPF40B-209ENST00000548825 OR2D2Q9H210 308 aa11.62□□□□□ -0.55
PRPF40B-209ENST00000548825 ZNF665Q9H7R5 613 aa11.62□□□□□ -0.55
PRPF40B-209ENST00000548825 TACC2O95359 2948 aa11.61□□□□□ -0.55
PRPF40B-209ENST00000548825 RND3P61587 244 aa11.61□□□□□ -0.55
PRPF40B-209ENST00000548825 OR5P3Q8WZ94 311 aa11.61□□□□□ -0.55
PRPF40B-209ENST00000548825 HINT2Q9BX68 163 aa11.61□□□□□ -0.55
PRPF40B-209ENST00000548825 NIT2Q9NQR4 276 aa11.61□□□□□ -0.55
PRPF40B-209ENST00000548825 AURKAIP1Q9NWT8 199 aaPredicted RBP11.61□□□□□ -0.55
PRPF40B-209ENST00000548825 KALRNO60229 2985 aa11.61□□□□□ -0.55
PRPF40B-209ENST00000548825 RBFOX3A6NFN3 312 aa11.61□□□□□ -0.55
PRPF40B-209ENST00000548825 CEBPZOSA8MTT3 80 aa11.61□□□□□ -0.55
PRPF40B-209ENST00000548825 CD55P08174 381 aa11.61□□□□□ -0.55
PRPF40B-209ENST00000548825 SP9P0CG40 484 aa11.61□□□□□ -0.55
PRPF40B-209ENST00000548825 DEFB108BQ8NET1 73 aa11.61□□□□□ -0.55
PRPF40B-209ENST00000548825 OR4D5Q8NGN0 318 aa11.61□□□□□ -0.55
PRPF40B-209ENST00000548825 FER1L6-AS2Q96M78 137 aa11.61□□□□□ -0.55
PRPF40B-209ENST00000548825 COLCA2A8K830 154 aa11.6□□□□□ -0.55
PRPF40B-209ENST00000548825 MPV17P39210 176 aa11.6□□□□□ -0.55
PRPF40B-209ENST00000548825 NDUFA6P56556 154 aa11.6□□□□□ -0.55
PRPF40B-209ENST00000548825 CCDC54Q8NEL0 328 aa11.6□□□□□ -0.55
PRPF40B-209ENST00000548825 TCTEX1D2Q8WW35 142 aa11.6□□□□□ -0.55
PRPF40B-209ENST00000548825 NANOS1Q8WY41 292 aaKnown RBP11.6□□□□□ -0.55
PRPF40B-209ENST00000548825 WDYHV1Q96HA8 205 aa11.6□□□□□ -0.55
PRPF40B-209ENST00000548825 WSB1Q9Y6I7 421 aa11.6□□□□□ -0.55
PRPF40B-209ENST00000548825 TNCP24821 2201 aa11.6□□□□□ -0.55
PRPF40B-209ENST00000548825 CA11O75493 328 aa11.6□□□□□ -0.55
PRPF40B-209ENST00000548825 TDGF1P13385 188 aa11.6□□□□□ -0.55
PRPF40B-209ENST00000548825 PTAFRP25105 342 aa11.6□□□□□ -0.55
PRPF40B-209ENST00000548825 EDDM3BP56851 147 aa11.6□□□□□ -0.55
PRPF40B-209ENST00000548825 MRPL49Q13405 166 aaKnown RBP11.6□□□□□ -0.55
PRPF40B-209ENST00000548825 VWA1Q6PCB0 445 aa11.6□□□□□ -0.55
PRPF40B-209ENST00000548825 RTL8AQ9BWD3 113 aa11.6□□□□□ -0.55
PRPF40B-209ENST00000548825 CLN8Q9UBY8 286 aa11.6□□□□□ -0.55
PRPF40B-209ENST00000548825 AKAP13Q12802 2813 aa11.6□□□□□ -0.55
PRPF40B-209ENST00000548825 CHD3Q12873 2000 aaKnown RBP11.6□□□□□ -0.55
PRPF40B-209ENST00000548825 H3BQ15 152 aa11.6□□□□□ -0.55
PRPF40B-209ENST00000548825 CD59P13987 128 aa11.6□□□□□ -0.55
PRPF40B-209ENST00000548825 SSTR5P35346 364 aa11.6□□□□□ -0.55
PRPF40B-209ENST00000548825 SRPXP78539 464 aa11.6□□□□□ -0.55
PRPF40B-209ENST00000548825 ZNF528Q3MIS6 628 aa11.6□□□□□ -0.55
PRPF40B-209ENST00000548825 KCNIP1Q9NZI2 227 aa11.6□□□□□ -0.55
PRPF40B-209ENST00000548825 IGF2RP11717 2491 aa11.59□□□□□ -0.55
PRPF40B-209ENST00000548825 OR5H1A6NKK0 313 aa11.59□□□□□ -0.55
PRPF40B-209ENST00000548825 M0R296 226 aa11.59□□□□□ -0.55
PRPF40B-209ENST00000548825 CDX4O14627 284 aaPredicted RBP11.59□□□□□ -0.55
PRPF40B-209ENST00000548825 RAMP3O60896 148 aa11.59□□□□□ -0.55
PRPF40B-209ENST00000548825 YIF1AO95070 293 aa11.59□□□□□ -0.55
PRPF40B-209ENST00000548825 CDS2O95674 445 aa11.59□□□□□ -0.55
PRPF40B-209ENST00000548825 HEXAP06865 529 aa11.59□□□□□ -0.55
PRPF40B-209ENST00000548825 MMP9P14780 707 aa11.59□□□□□ -0.55
PRPF40B-209ENST00000548825 HLA-DRB3P79483 266 aa11.59□□□□□ -0.55
PRPF40B-209ENST00000548825 TGFBR3Q03167 851 aa11.59□□□□□ -0.55
PRPF40B-209ENST00000548825 FDCSPQ8NFU4 85 aa11.59□□□□□ -0.55
PRPF40B-209ENST00000548825 LYRM2Q9NU23 88 aaPredicted RBP11.59□□□□□ -0.55
PRPF40B-209ENST00000548825 IGHV3OR15-7A0A075B7D8 119 aa11.59□□□□□ -0.55
PRPF40B-209ENST00000548825 NAPSAO96009 420 aa11.59□□□□□ -0.55
PRPF40B-209ENST00000548825 HABP2Q14520 560 aaPredicted RBP11.59□□□□□ -0.55
PRPF40B-209ENST00000548825 DEFB109BQ30KR1 87 aa11.59□□□□□ -0.55
PRPF40B-209ENST00000548825 ZNF429Q86V71 674 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms