RNA–Protein interactions for RNA: ENST00000542817.1

NPIPB3-210, Transcript of nuclear pore complex interacting protein family member B3, humanhuman

TSL 5 BASIC

Gene NPIPB3, Length 1,342 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3-210ENST00000542817 RBP4P02753 201 aa8.72□□□□□ -1.01
NPIPB3-210ENST00000542817 SCTP09683 121 aa8.72□□□□□ -1.01
NPIPB3-210ENST00000542817 IGHV1-8P0DP01 117 aa8.72□□□□□ -1.01
NPIPB3-210ENST00000542817 GATA3P23771 443 aa8.72□□□□□ -1.01
NPIPB3-210ENST00000542817 DTYMKP23919 212 aa8.72□□□□□ -1.01
NPIPB3-210ENST00000542817 PRTN3P24158 256 aa8.72□□□□□ -1.01
NPIPB3-210ENST00000542817 GLP1RP43220 463 aa8.72□□□□□ -1.01
NPIPB3-210ENST00000542817 SRSF7Q16629 238 aaKnown RBP eCLIP8.72□□□□□ -1.01
NPIPB3-210ENST00000542817 TUSC1Q2TAM9 212 aa8.72□□□□□ -1.01
NPIPB3-210ENST00000542817 LDLRAD2Q5SZI1 272 aa8.72□□□□□ -1.01
NPIPB3-210ENST00000542817 PRAMEF5Q5TYX0 476 aa8.72□□□□□ -1.01
NPIPB3-210ENST00000542817 ZNF565Q8N9K5 539 aa8.72□□□□□ -1.01
NPIPB3-210ENST00000542817 RFESDQ8TAC1 157 aa8.72□□□□□ -1.01
NPIPB3-210ENST00000542817 UPRTQ96BW1 309 aa8.72□□□□□ -1.01
NPIPB3-210ENST00000542817 DIRAS2Q96HU8 199 aa8.72□□□□□ -1.01
NPIPB3-210ENST00000542817 KIRREL1Q96J84 757 aa8.72□□□□□ -1.01
NPIPB3-210ENST00000542817 SRRQ9GZT4 340 aa8.72□□□□□ -1.01
NPIPB3-210ENST00000542817 RIMS4Q9H426 269 aaPredicted RBP8.72□□□□□ -1.01
NPIPB3-210ENST00000542817 C7orf69Q9H7B7 122 aa8.72□□□□□ -1.01
NPIPB3-210ENST00000542817 TAF9BQ9HBM6 251 aa8.72□□□□□ -1.01
NPIPB3-210ENST00000542817 SIRT7Q9NRC8 400 aa8.72□□□□□ -1.01
NPIPB3-210ENST00000542817 ONECUT1Q9UBC0 465 aa8.72□□□□□ -1.01
NPIPB3-210ENST00000542817 TRAPPC2LQ9UL33 140 aa8.72□□□□□ -1.01
NPIPB3-210ENST00000542817 MRPS7Q9Y2R9 242 aaKnown RBP8.72□□□□□ -1.01
NPIPB3-210ENST00000542817 LINC00862A6NCI5 91 aa8.71□□□□□ -1.02
NPIPB3-210ENST00000542817 CTDSPLO15194 276 aa8.71□□□□□ -1.02
NPIPB3-210ENST00000542817 CD3GP09693 182 aa8.71□□□□□ -1.02
NPIPB3-210ENST00000542817 IGHV4-38-2P0DP08 117 aa8.71□□□□□ -1.02
NPIPB3-210ENST00000542817 HOXB4P17483 251 aaPredicted RBP8.71□□□□□ -1.02
NPIPB3-210ENST00000542817 NAT1P18440 290 aa8.71□□□□□ -1.02
NPIPB3-210ENST00000542817 GZMHP20718 246 aa8.71□□□□□ -1.02
NPIPB3-210ENST00000542817 DGCR2P98153 550 aa8.71□□□□□ -1.02
NPIPB3-210ENST00000542817 BAMBIQ13145 260 aa8.71□□□□□ -1.02
NPIPB3-210ENST00000542817 KLRD1Q13241 179 aa8.71□□□□□ -1.02
NPIPB3-210ENST00000542817 ARFRP1Q13795 201 aa8.71□□□□□ -1.02
NPIPB3-210ENST00000542817 ARL6IP1Q15041 203 aa8.71□□□□□ -1.02
NPIPB3-210ENST00000542817 FAHD2BQ6P2I3 314 aaPredicted RBP8.71□□□□□ -1.02
NPIPB3-210ENST00000542817 BTNL3Q6UXE8 466 aa8.71□□□□□ -1.02
NPIPB3-210ENST00000542817 ZNF782Q6ZMW2 699 aaPredicted RBP8.71□□□□□ -1.02
NPIPB3-210ENST00000542817 VMO1Q7Z5L0 202 aa8.71□□□□□ -1.02
NPIPB3-210ENST00000542817 HOGA1Q86XE5 327 aa8.71□□□□□ -1.02
NPIPB3-210ENST00000542817 LDLRAD3Q86YD5 345 aa8.71□□□□□ -1.02
NPIPB3-210ENST00000542817 OR52I2Q8NH67 350 aa8.71□□□□□ -1.02
NPIPB3-210ENST00000542817 ARL11Q969Q4 196 aa8.71□□□□□ -1.02
NPIPB3-210ENST00000542817 FAHD2AQ96GK7 314 aa8.71□□□□□ -1.02
NPIPB3-210ENST00000542817 TOLLIPQ9H0E2 274 aa8.71□□□□□ -1.02
NPIPB3-210ENST00000542817 PARP12Q9H0J9 701 aaKnown RBP8.71□□□□□ -1.02
NPIPB3-210ENST00000542817 METTL8Q9H825 291 aaKnown RBP8.71□□□□□ -1.02
NPIPB3-210ENST00000542817 SOX21Q9Y651 276 aaPredicted RBP8.71□□□□□ -1.02
NPIPB3-210ENST00000542817 CENPVL3A0A0U1RRI6 287 aa8.7□□□□□ -1.02
NPIPB3-210ENST00000542817 FABP12A6NFH5 140 aa8.7□□□□□ -1.02
NPIPB3-210ENST00000542817 TRDCB7Z8K6 153 aa8.7□□□□□ -1.02
NPIPB3-210ENST00000542817 SNAPC5O75971 98 aa8.7□□□□□ -1.02
NPIPB3-210ENST00000542817 TOX4O94842 621 aa8.7□□□□□ -1.02
NPIPB3-210ENST00000542817 PRSS3P35030 304 aa8.7□□□□□ -1.02
NPIPB3-210ENST00000542817 ZNF134P52741 427 aa8.7□□□□□ -1.02
NPIPB3-210ENST00000542817 HLA-DRB3P79483 266 aa8.7□□□□□ -1.02
NPIPB3-210ENST00000542817 PITPNAQ00169 270 aa8.7□□□□□ -1.02
NPIPB3-210ENST00000542817 TAGLNQ01995 201 aaKnown RBP8.7□□□□□ -1.02
NPIPB3-210ENST00000542817 GNMTQ14749 295 aa8.7□□□□□ -1.02
NPIPB3-210ENST00000542817 PYHIN1Q6K0P9 492 aa8.7□□□□□ -1.02
NPIPB3-210ENST00000542817 MOB1BQ7L9L4 216 aa8.7□□□□□ -1.02
NPIPB3-210ENST00000542817 TRAPPC6BQ86SZ2 158 aa8.7□□□□□ -1.02
NPIPB3-210ENST00000542817 PNKDQ8N490 385 aa8.7□□□□□ -1.02
NPIPB3-210ENST00000542817 PIP4P2Q8N4L2 257 aa8.7□□□□□ -1.02
NPIPB3-210ENST00000542817 ZNF439Q8NDP4 499 aa8.7□□□□□ -1.02
NPIPB3-210ENST00000542817 OR52L2PQ8NGH6 319 aa8.7□□□□□ -1.02
NPIPB3-210ENST00000542817 SMIM4Q8WVI0 70 aa8.7□□□□□ -1.02
NPIPB3-210ENST00000542817 LEAP2Q969E1 77 aa8.7□□□□□ -1.02
NPIPB3-210ENST00000542817 PCGF1Q9BSM1 259 aa8.7□□□□□ -1.02
NPIPB3-210ENST00000542817 CABLES2Q9BTV7 478 aa8.7□□□□□ -1.02
NPIPB3-210ENST00000542817 ZNF286AQ9HBT8 521 aa8.7□□□□□ -1.02
NPIPB3-210ENST00000542817 GFOD1Q9NXC2 390 aa8.7□□□□□ -1.02
NPIPB3-210ENST00000542817 IDI2-AS1Q9NZ38 188 aa8.7□□□□□ -1.02
NPIPB3-210ENST00000542817 ZNRD1Q9P1U0 126 aa8.7□□□□□ -1.02
NPIPB3-210ENST00000542817 KLK11Q9UBX7 282 aa8.7□□□□□ -1.02
NPIPB3-210ENST00000542817 PRELID1Q9Y255 219 aa8.7□□□□□ -1.02
NPIPB3-210ENST00000542817 SESN1Q9Y6P5 492 aa8.7□□□□□ -1.02
NPIPB3-210ENST00000542817 JMJD1CQ15652 2540 aa8.69□□□□□ -1.02
NPIPB3-210ENST00000542817 IGHV3-43A0A0B4J1X8 118 aa8.69□□□□□ -1.02
NPIPB3-210ENST00000542817 A8MV72 311 aaPredicted RBP8.69□□□□□ -1.02
NPIPB3-210ENST00000542817 ODF3BA8MYP8 253 aa8.69□□□□□ -1.02
NPIPB3-210ENST00000542817 GABARAPH6UMI1 98 aa8.69□□□□□ -1.02
NPIPB3-210ENST00000542817 SULT1C2O00338 296 aa8.69□□□□□ -1.02
NPIPB3-210ENST00000542817 SLC31A2O15432 143 aa8.69□□□□□ -1.02
NPIPB3-210ENST00000542817 FABP7O15540 132 aa8.69□□□□□ -1.02
NPIPB3-210ENST00000542817 GSTZ1O43708 216 aaPredicted RBP8.69□□□□□ -1.02
NPIPB3-210ENST00000542817 IGLV1-47P01700 117 aa8.69□□□□□ -1.02
NPIPB3-210ENST00000542817 FCER2P06734 321 aa8.69□□□□□ -1.02
NPIPB3-210ENST00000542817 LPLP06858 475 aa8.69□□□□□ -1.02
NPIPB3-210ENST00000542817 IGHV3-43DP0DP04 118 aa8.69□□□□□ -1.02
NPIPB3-210ENST00000542817 FPR2P25090 351 aa8.69□□□□□ -1.02
NPIPB3-210ENST00000542817 CD34P28906 385 aa8.69□□□□□ -1.02
NPIPB3-210ENST00000542817 HTD2P86397 168 aa8.69□□□□□ -1.02
NPIPB3-210ENST00000542817 Q5BKY6 102 aa8.69□□□□□ -1.02
NPIPB3-210ENST00000542817 IGSF11Q5DX21 431 aa8.69□□□□□ -1.02
NPIPB3-210ENST00000542817 FAM120AOSQ5T036 256 aa8.69□□□□□ -1.02
NPIPB3-210ENST00000542817 METTL11BQ5VVY1 283 aa8.69□□□□□ -1.02
NPIPB3-210ENST00000542817 OR52W1Q6IF63 320 aa8.69□□□□□ -1.02
NPIPB3-210ENST00000542817 CLEC9AQ6UXN8 241 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms