RNA–Protein interactions for RNA: ENST00000520948.5

VEGFA-222, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 1,199 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-222ENST00000520948 OR4P4Q8NGL7 312 aa14.69□□□□□ -0.06
VEGFA-222ENST00000520948 ZNF596Q8TC21 504 aa14.69□□□□□ -0.06
VEGFA-222ENST00000520948 C17orf50Q8WW18 174 aa14.69□□□□□ -0.06
VEGFA-222ENST00000520948 AP3S1Q92572 193 aa14.69□□□□□ -0.06
VEGFA-222ENST00000520948 CHMP1AQ9HD42 196 aaPredicted RBP14.69□□□□□ -0.06
VEGFA-222ENST00000520948 RAB9BQ9NP90 201 aa14.69□□□□□ -0.06
VEGFA-222ENST00000520948 GFOD1Q9NXC2 390 aa14.69□□□□□ -0.06
VEGFA-222ENST00000520948 MGAT4AQ9UM21 535 aa14.69□□□□□ -0.06
VEGFA-222ENST00000520948 PSG11Q9UQ72 335 aa14.69□□□□□ -0.06
VEGFA-222ENST00000520948 TBL2Q9Y4P3 447 aaKnown RBP14.69□□□□□ -0.06
VEGFA-222ENST00000520948 SMIM31A0A1B0GVY4 71 aa14.68□□□□□ -0.06
VEGFA-222ENST00000520948 MEIOCA2RUB1 952 aa14.68□□□□□ -0.06
VEGFA-222ENST00000520948 DPPA5A6NC42 116 aa14.68□□□□□ -0.06
VEGFA-222ENST00000520948 SSX5O60225 188 aa14.68□□□□□ -0.06
VEGFA-222ENST00000520948 HPGDSO60760 199 aa14.68□□□□□ -0.06
VEGFA-222ENST00000520948 ARG1P05089 322 aa14.68□□□□□ -0.06
VEGFA-222ENST00000520948 FCGR3AP08637 254 aa14.68□□□□□ -0.06
VEGFA-222ENST00000520948 ELK1P19419 428 aa14.68□□□□□ -0.06
VEGFA-222ENST00000520948 NFYBP25208 207 aa14.68□□□□□ -0.06
VEGFA-222ENST00000520948 FAM53AQ6NSI3 398 aaPredicted RBP14.68□□□□□ -0.06
VEGFA-222ENST00000520948 Q6YL49 198 aa14.68□□□□□ -0.06
VEGFA-222ENST00000520948 Q6ZS49 121 aa14.68□□□□□ -0.06
VEGFA-222ENST00000520948 LHFPL4Q7Z7J7 247 aa14.68□□□□□ -0.06
VEGFA-222ENST00000520948 C8orf31Q8N9H6 132 aa14.68□□□□□ -0.06
VEGFA-222ENST00000520948 BEND2Q8NDZ0 799 aa14.68□□□□□ -0.06
VEGFA-222ENST00000520948 OR9G1Q8NH87 305 aa14.68□□□□□ -0.06
VEGFA-222ENST00000520948 PHF21AQ96BD5 680 aa14.68□□□□□ -0.06
VEGFA-222ENST00000520948 SLIRPQ9GZT3 109 aaKnown RBP14.68□□□□□ -0.06
VEGFA-222ENST00000520948 MEGF9Q9H1U4 602 aa14.68□□□□□ -0.06
VEGFA-222ENST00000520948 AUNIPQ9H7T9 357 aa14.68□□□□□ -0.06
VEGFA-222ENST00000520948 NDUFA13Q9P0J0 144 aa14.68□□□□□ -0.06
VEGFA-222ENST00000520948 FAM172BPA6NC97 362 aa14.67□□□□□ -0.06
VEGFA-222ENST00000520948 TMEM235A6NFC5 223 aa14.67□□□□□ -0.06
VEGFA-222ENST00000520948 CLDN34H7C241 214 aa14.67□□□□□ -0.06
VEGFA-222ENST00000520948 J3QR06 171 aa14.67□□□□□ -0.06
VEGFA-222ENST00000520948 SDCBPO00560 298 aaPredicted RBP14.67□□□□□ -0.06
VEGFA-222ENST00000520948 DTYMKP23919 212 aa14.67□□□□□ -0.06
VEGFA-222ENST00000520948 PITPNAQ00169 270 aa14.67□□□□□ -0.06
VEGFA-222ENST00000520948 ARFRP1Q13795 201 aa14.67□□□□□ -0.06
VEGFA-222ENST00000520948 LTC4SQ16873 150 aa14.67□□□□□ -0.06
VEGFA-222ENST00000520948 HLA-DRB5Q30154 266 aa14.67□□□□□ -0.06
VEGFA-222ENST00000520948 LY6G6FQ5SQ64 297 aa14.67□□□□□ -0.06
VEGFA-222ENST00000520948 MINOS1Q5TGZ0 78 aa14.67□□□□□ -0.06
VEGFA-222ENST00000520948 DYNAPQ8N1N2 210 aa14.67□□□□□ -0.06
VEGFA-222ENST00000520948 LINC00311Q8N616 119 aa14.67□□□□□ -0.06
VEGFA-222ENST00000520948 ZNF439Q8NDP4 499 aa14.67□□□□□ -0.06
VEGFA-222ENST00000520948 GALMQ96C23 342 aa14.67□□□□□ -0.06
VEGFA-222ENST00000520948 MALSU1Q96EH3 234 aa14.67□□□□□ -0.06
VEGFA-222ENST00000520948 NXF2Q9GZY0 626 aaKnown RBP14.67□□□□□ -0.06
VEGFA-222ENST00000520948 MIXL1Q9H2W2 232 aa14.67□□□□□ -0.06
VEGFA-222ENST00000520948 MINOS1-NBL1R4GNA1 71 aa14.67□□□□□ -0.06
VEGFA-222ENST00000520948 IGHV3-43A0A0B4J1X8 118 aa14.66□□□□□ -0.06
VEGFA-222ENST00000520948 CCDC160A6NGH7 325 aa14.66□□□□□ -0.06
VEGFA-222ENST00000520948 TRDCB7Z8K6 153 aa14.66□□□□□ -0.06
VEGFA-222ENST00000520948 LY6LH3BQJ8 138 aa14.66□□□□□ -0.06
VEGFA-222ENST00000520948 CTDSP2O14595 271 aa14.66□□□□□ -0.06
VEGFA-222ENST00000520948 HLA-DQB1P01920 261 aa14.66□□□□□ -0.06
VEGFA-222ENST00000520948 SCTP09683 121 aa14.66□□□□□ -0.06
VEGFA-222ENST00000520948 IGHV3-43DP0DP04 118 aa14.66□□□□□ -0.06
VEGFA-222ENST00000520948 PRRX1P54821 245 aa14.66□□□□□ -0.06
VEGFA-222ENST00000520948 LGALS4P56470 323 aa14.66□□□□□ -0.06
VEGFA-222ENST00000520948 HLA-DRB3P79483 266 aa14.66□□□□□ -0.06
VEGFA-222ENST00000520948 MRPS15P82914 257 aaKnown RBP14.66□□□□□ -0.06
VEGFA-222ENST00000520948 MORN2Q502X0 79 aa14.66□□□□□ -0.06
VEGFA-222ENST00000520948 LDLRAD3Q86YD5 345 aa14.66□□□□□ -0.06
VEGFA-222ENST00000520948 IZUMO1Q8IYV9 350 aa14.66□□□□□ -0.06
VEGFA-222ENST00000520948 PRR18Q8N4B5 295 aa14.66□□□□□ -0.06
VEGFA-222ENST00000520948 DTX3Q8N9I9 347 aa14.66□□□□□ -0.06
VEGFA-222ENST00000520948 OR52L2PQ8NGH6 319 aa14.66□□□□□ -0.06
VEGFA-222ENST00000520948 SETD6Q8TBK2 473 aa14.66□□□□□ -0.06
VEGFA-222ENST00000520948 LEAP2Q969E1 77 aa14.66□□□□□ -0.06
VEGFA-222ENST00000520948 DGCR14Q96DF8 476 aaKnown RBP14.66□□□□□ -0.06
VEGFA-222ENST00000520948 TNFRSF19Q9NS68 423 aa14.66□□□□□ -0.06
VEGFA-222ENST00000520948 ZNF230Q9UIE0 474 aaPredicted RBP14.66□□□□□ -0.06
VEGFA-222ENST00000520948 IGKV1-6A0A0C4DH72 117 aa14.65□□□□□ -0.06
VEGFA-222ENST00000520948 BUB1B-PAK6H3BSN5 160 aa14.65□□□□□ -0.06
VEGFA-222ENST00000520948 HOXA3O43365 443 aaPredicted RBP14.65□□□□□ -0.06
VEGFA-222ENST00000520948 YPEL1O60688 119 aa14.65□□□□□ -0.06
VEGFA-222ENST00000520948 IGHV3-7P01780 117 aa14.65□□□□□ -0.06
VEGFA-222ENST00000520948 FBP1P09467 338 aa14.65□□□□□ -0.06
VEGFA-222ENST00000520948 PTHLHP12272 177 aa14.65□□□□□ -0.06
VEGFA-222ENST00000520948 ZNF134P52741 427 aa14.65□□□□□ -0.06
VEGFA-222ENST00000520948 SRSF4Q08170 494 aaKnown RBP14.65□□□□□ -0.06
VEGFA-222ENST00000520948 FOXB2Q5VYV0 432 aa14.65□□□□□ -0.06
VEGFA-222ENST00000520948 NUDCD2Q8WVJ2 157 aa14.65□□□□□ -0.06
VEGFA-222ENST00000520948 YPEL2Q96QA6 119 aa14.65□□□□□ -0.06
VEGFA-222ENST00000520948 OCSTAMPQ9BR26 566 aa14.65□□□□□ -0.06
VEGFA-222ENST00000520948 MMP28Q9H239 520 aa14.65□□□□□ -0.06
VEGFA-222ENST00000520948 OR2S2Q9NQN1 319 aa14.65□□□□□ -0.06
VEGFA-222ENST00000520948 ZNRD1Q9P1U0 126 aa14.65□□□□□ -0.06
VEGFA-222ENST00000520948 JPT1Q9UK76 154 aa14.65□□□□□ -0.06
VEGFA-222ENST00000520948 FAM96BQ9Y3D0 163 aa14.65□□□□□ -0.06
VEGFA-222ENST00000520948 IGKV1D-8A0A087WSZ0 117 aa14.64□□□□□ -0.07
VEGFA-222ENST00000520948 TOR1AO14656 332 aa14.64□□□□□ -0.07
VEGFA-222ENST00000520948 HTR1DP28221 377 aa14.64□□□□□ -0.07
VEGFA-222ENST00000520948 TALDO1P37837 337 aa14.64□□□□□ -0.07
VEGFA-222ENST00000520948 MNDAP41218 407 aa14.64□□□□□ -0.07
VEGFA-222ENST00000520948 IER3P46695 156 aa14.64□□□□□ -0.07
VEGFA-222ENST00000520948 TAS2R20P59543 309 aa14.64□□□□□ -0.07
VEGFA-222ENST00000520948 GNG2P59768 71 aa14.64□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 69.8 ms