RNA–Protein interactions for RNA: ENST00000520857.5

TRAPPC9-208, Transcript of trafficking protein particle complex 9, humanhuman

TSL 1 (best)

Gene TRAPPC9, Length 3,693 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-208ENST00000520857 PLA2G5P39877 138 aa10.98□□□□□ -0.65
TRAPPC9-208ENST00000520857 CLDN15P56746 228 aa10.98□□□□□ -0.65
TRAPPC9-208ENST00000520857 TMEM38BQ9NVV0 291 aa10.98□□□□□ -0.65
TRAPPC9-208ENST00000520857 TAAR3PQ9P1P4 343 aa10.98□□□□□ -0.65
TRAPPC9-208ENST00000520857 TP53TG5Q9Y2B4 290 aa10.98□□□□□ -0.65
TRAPPC9-208ENST00000520857 LAMA1P25391 3075 aa10.98□□□□□ -0.65
TRAPPC9-208ENST00000520857 BCAT2O15382 392 aaPredicted RBP10.98□□□□□ -0.65
TRAPPC9-208ENST00000520857 SERPINA7P05543 415 aa10.98□□□□□ -0.65
TRAPPC9-208ENST00000520857 DEFA4P12838 97 aa10.98□□□□□ -0.65
TRAPPC9-208ENST00000520857 EXT1Q16394 746 aa10.98□□□□□ -0.65
TRAPPC9-208ENST00000520857 ACOT6Q3I5F7 207 aaPredicted RBP10.98□□□□□ -0.65
TRAPPC9-208ENST00000520857 SLC25A53Q5H9E4 307 aa10.98□□□□□ -0.65
TRAPPC9-208ENST00000520857 ZNF808Q8N4W9 903 aaPredicted RBP10.98□□□□□ -0.65
TRAPPC9-208ENST00000520857 GATAD1Q8WUU5 269 aa10.98□□□□□ -0.65
TRAPPC9-208ENST00000520857 RP1L1Q8IWN7 2480 aaPredicted RBP10.98□□□□□ -0.65
TRAPPC9-208ENST00000520857 FER1L5A0AVI2 2057 aa10.98□□□□□ -0.65
TRAPPC9-208ENST00000520857 MYO15AQ9UKN7 3530 aa10.98□□□□□ -0.65
TRAPPC9-208ENST00000520857 H0Y980 276 aa10.98□□□□□ -0.65
TRAPPC9-208ENST00000520857 SYNGR3O43761 229 aa10.98□□□□□ -0.65
TRAPPC9-208ENST00000520857 GYPAP02724 150 aa10.98□□□□□ -0.65
TRAPPC9-208ENST00000520857 SSR4P51571 173 aa10.98□□□□□ -0.65
TRAPPC9-208ENST00000520857 FFAR4Q5NUL3 377 aa10.98□□□□□ -0.65
TRAPPC9-208ENST00000520857 FBXO46Q6PJ61 603 aaPredicted RBP10.98□□□□□ -0.65
TRAPPC9-208ENST00000520857 PNPLA5Q7Z6Z6 429 aaPredicted RBP10.98□□□□□ -0.65
TRAPPC9-208ENST00000520857 OR5D13Q8NGL4 314 aa10.98□□□□□ -0.65
TRAPPC9-208ENST00000520857 OR10G4Q8NGN3 311 aa10.98□□□□□ -0.65
TRAPPC9-208ENST00000520857 OR10G9Q8NGN4 311 aa10.98□□□□□ -0.65
TRAPPC9-208ENST00000520857 OR10G7Q8NGN6 311 aa10.98□□□□□ -0.65
TRAPPC9-208ENST00000520857 HLA-CQ95604 372 aa10.98□□□□□ -0.65
TRAPPC9-208ENST00000520857 TMEM54Q969K7 222 aa10.98□□□□□ -0.65
TRAPPC9-208ENST00000520857 HS3ST6Q96QI5 342 aa10.98□□□□□ -0.65
TRAPPC9-208ENST00000520857 SAMD10Q9BYL1 202 aa10.98□□□□□ -0.65
TRAPPC9-208ENST00000520857 SRXN1Q9BYN0 137 aa10.98□□□□□ -0.65
TRAPPC9-208ENST00000520857 OR2H1Q9GZK4 316 aa10.98□□□□□ -0.65
TRAPPC9-208ENST00000520857 CHD3Q12873 2000 aaKnown RBP10.98□□□□□ -0.65
TRAPPC9-208ENST00000520857 GJE1A6NN92 205 aa10.97□□□□□ -0.65
TRAPPC9-208ENST00000520857 C2CD4DB7Z1M9 353 aa10.97□□□□□ -0.65
TRAPPC9-208ENST00000520857 SIRPB1O00241 398 aa10.97□□□□□ -0.65
TRAPPC9-208ENST00000520857 HRASP01112 189 aa10.97□□□□□ -0.65
TRAPPC9-208ENST00000520857 P04436 131 aa10.97□□□□□ -0.65
TRAPPC9-208ENST00000520857 CD33P20138 364 aa10.97□□□□□ -0.65
TRAPPC9-208ENST00000520857 OTX1P32242 354 aaPredicted RBP10.97□□□□□ -0.65
TRAPPC9-208ENST00000520857 RND2P52198 227 aa10.97□□□□□ -0.65
TRAPPC9-208ENST00000520857 NUBP1P53384 320 aa10.97□□□□□ -0.65
TRAPPC9-208ENST00000520857 NUTF2P61970 127 aaKnown RBP10.97□□□□□ -0.65
TRAPPC9-208ENST00000520857 SSX7Q7RTT5 188 aa10.97□□□□□ -0.65
TRAPPC9-208ENST00000520857 FGFBP3Q8TAT2 258 aa10.97□□□□□ -0.65
TRAPPC9-208ENST00000520857 CHRNA10Q9GZZ6 450 aa10.97□□□□□ -0.65
TRAPPC9-208ENST00000520857 MSL2Q9HCI7 577 aa10.97□□□□□ -0.65
TRAPPC9-208ENST00000520857 PRUNE2Q8WUY3 3088 aa10.97□□□□□ -0.65
TRAPPC9-208ENST00000520857 USF3Q68DE3 2245 aa10.97□□□□□ -0.65
TRAPPC9-208ENST00000520857 FGF5P12034 268 aa10.97□□□□□ -0.65
TRAPPC9-208ENST00000520857 PAX9P55771 341 aa10.97□□□□□ -0.65
TRAPPC9-208ENST00000520857 DSCR4P56555 118 aaPredicted RBP10.97□□□□□ -0.65
TRAPPC9-208ENST00000520857 NXPH1P58417 271 aa10.97□□□□□ -0.65
TRAPPC9-208ENST00000520857 RPL23P62829 140 aaKnown RBP10.97□□□□□ -0.65
TRAPPC9-208ENST00000520857 ARL16Q0P5N6 197 aa10.97□□□□□ -0.65
TRAPPC9-208ENST00000520857 CACNA1EQ15878 2313 aa10.97□□□□□ -0.65
TRAPPC9-208ENST00000520857 RPS19BP1Q86WX3 136 aaKnown RBP10.97□□□□□ -0.65
TRAPPC9-208ENST00000520857 ZDHHC23Q8IYP9 409 aa10.97□□□□□ -0.65
TRAPPC9-208ENST00000520857 ABHD14BQ96IU4 210 aa10.97□□□□□ -0.65
TRAPPC9-208ENST00000520857 OR2W1Q9Y3N9 320 aa10.97□□□□□ -0.65
TRAPPC9-208ENST00000520857 A0A1W2PR77 199 aa10.97□□□□□ -0.65
TRAPPC9-208ENST00000520857 KBTBD11O94819 623 aa10.97□□□□□ -0.65
TRAPPC9-208ENST00000520857 CNN1P51911 297 aaKnown RBP10.97□□□□□ -0.65
TRAPPC9-208ENST00000520857 ZNF816Q0VGE8 651 aaPredicted RBP10.97□□□□□ -0.65
TRAPPC9-208ENST00000520857 ZNF525Q8N782 197 aa10.97□□□□□ -0.65
TRAPPC9-208ENST00000520857 TAF15Q92804 592 aaKnown RBP eCLIP10.97□□□□□ -0.65
TRAPPC9-208ENST00000520857 TBX15Q96SF7 602 aa10.97□□□□□ -0.65
TRAPPC9-208ENST00000520857 P2RX4Q99571 388 aa10.97□□□□□ -0.65
TRAPPC9-208ENST00000520857 MRPL37Q9BZE1 423 aaKnown RBP10.97□□□□□ -0.65
TRAPPC9-208ENST00000520857 hCG_38984A0A1B0GV85 526 aa10.96□□□□□ -0.65
TRAPPC9-208ENST00000520857 SYNGR1O43759 233 aa10.96□□□□□ -0.65
TRAPPC9-208ENST00000520857 MRPL33O75394 65 aaKnown RBP10.96□□□□□ -0.65
TRAPPC9-208ENST00000520857 IGLV3-1P01715 115 aa10.96□□□□□ -0.65
TRAPPC9-208ENST00000520857 WNT5AP41221 380 aa10.96□□□□□ -0.65
TRAPPC9-208ENST00000520857 TNFRSF9Q07011 255 aa10.96□□□□□ -0.65
TRAPPC9-208ENST00000520857 ZNF726P1Q15940 193 aa10.96□□□□□ -0.65
TRAPPC9-208ENST00000520857 Q6ZRM9 215 aa10.96□□□□□ -0.65
TRAPPC9-208ENST00000520857 CYP2G1PQ6ZSU1 146 aa10.96□□□□□ -0.65
TRAPPC9-208ENST00000520857 PARD6AQ9NPB6 346 aa10.96□□□□□ -0.65
TRAPPC9-208ENST00000520857 OR1A1Q9P1Q5 309 aa10.96□□□□□ -0.65
TRAPPC9-208ENST00000520857 CHCHD2Q9Y6H1 151 aaPredicted RBP10.96□□□□□ -0.65
TRAPPC9-208ENST00000520857 FREM1Q5H8C1 2179 aa10.96□□□□□ -0.65
TRAPPC9-208ENST00000520857 A0A1B0GUS0 222 aa10.96□□□□□ -0.65
TRAPPC9-208ENST00000520857 DUXBA0A1W2PPF3 345 aa10.96□□□□□ -0.65
TRAPPC9-208ENST00000520857 A0A1W2PPV4 95 aa10.96□□□□□ -0.65
TRAPPC9-208ENST00000520857 GDF9O60383 454 aa10.96□□□□□ -0.65
TRAPPC9-208ENST00000520857 CRYGSP22914 178 aa10.96□□□□□ -0.65
TRAPPC9-208ENST00000520857 PPP1CBP62140 327 aa10.96□□□□□ -0.65
TRAPPC9-208ENST00000520857 SERF2P84101 59 aa10.96□□□□□ -0.65
TRAPPC9-208ENST00000520857 VASH2Q86V25 355 aa10.96□□□□□ -0.65
TRAPPC9-208ENST00000520857 ACTR3CQ9C0K3 210 aaPredicted RBP10.96□□□□□ -0.65
TRAPPC9-208ENST00000520857 TUBG2Q9NRH3 451 aa10.96□□□□□ -0.65
TRAPPC9-208ENST00000520857 PLSCR2Q9NRY7 297 aa10.96□□□□□ -0.65
TRAPPC9-208ENST00000520857 TMEM242Q9NWH2 141 aa10.96□□□□□ -0.65
TRAPPC9-208ENST00000520857 PAM16Q9Y3D7 125 aa10.96□□□□□ -0.65
TRAPPC9-208ENST00000520857 DEGS1O15121 323 aa10.96□□□□□ -0.66
TRAPPC9-208ENST00000520857 CEACAM1P13688 526 aa10.96□□□□□ -0.66
TRAPPC9-208ENST00000520857 GZMHP20718 246 aa10.96□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms