RNA–Protein interactions for RNA: ENST00000467885.6

USP39-213, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 5

Gene USP39, Length 338 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-213ENST00000467885 ASAH1Q13510 395 aa4.87□□□□□ -1.63
USP39-213ENST00000467885 DCTN2Q13561 401 aaKnown RBP4.87□□□□□ -1.63
USP39-213ENST00000467885 KIR2DS1Q14954 304 aa4.87□□□□□ -1.63
USP39-213ENST00000467885 CDK10Q15131 360 aa4.87□□□□□ -1.63
USP39-213ENST00000467885 CHRFAM7AQ494W8 412 aa4.87□□□□□ -1.63
USP39-213ENST00000467885 PLA1AQ53H76 456 aa4.87□□□□□ -1.63
USP39-213ENST00000467885 ESCO2Q56NI9 601 aa4.87□□□□□ -1.63
USP39-213ENST00000467885 CT45A1Q5HYN5 189 aa4.87□□□□□ -1.63
USP39-213ENST00000467885 AADACL3Q5VUY0 350 aa4.87□□□□□ -1.63
USP39-213ENST00000467885 ZNF57Q68EA5 555 aaPredicted RBP4.87□□□□□ -1.63
USP39-213ENST00000467885 HCP5Q6MZN7 132 aa4.87□□□□□ -1.63
USP39-213ENST00000467885 LHFPL1Q86WI0 220 aa4.87□□□□□ -1.63
USP39-213ENST00000467885 H1FOOQ8IZA3 346 aaPredicted RBP4.87□□□□□ -1.63
USP39-213ENST00000467885 MAPK1IP1LQ8NDC0 245 aa4.87□□□□□ -1.63
USP39-213ENST00000467885 OR4C16Q8NGL9 310 aa4.87□□□□□ -1.63
USP39-213ENST00000467885 OR13C8Q8NGS7 320 aa4.87□□□□□ -1.63
USP39-213ENST00000467885 OR6F1Q8NGZ6 308 aa4.87□□□□□ -1.63
USP39-213ENST00000467885 CT45A3Q8NHU0 189 aa4.87□□□□□ -1.63
USP39-213ENST00000467885 DEDD2Q8WXF8 326 aa4.87□□□□□ -1.63
USP39-213ENST00000467885 MSI2Q96DH6 328 aaKnown RBP4.87□□□□□ -1.63
USP39-213ENST00000467885 KIRREL1Q96J84 757 aa4.87□□□□□ -1.63
USP39-213ENST00000467885 COX4I2Q96KJ9 171 aa4.87□□□□□ -1.63
USP39-213ENST00000467885 YPEL2Q96QA6 119 aa4.87□□□□□ -1.63
USP39-213ENST00000467885 AGMATQ9BSE5 352 aa4.87□□□□□ -1.63
USP39-213ENST00000467885 CABLES2Q9BTV7 478 aa4.87□□□□□ -1.63
USP39-213ENST00000467885 PARP12Q9H0J9 701 aaKnown RBP4.87□□□□□ -1.63
USP39-213ENST00000467885 C11orf54Q9H0W9 315 aaPredicted RBP4.87□□□□□ -1.63
USP39-213ENST00000467885 SIRPDQ9H106 197 aa4.87□□□□□ -1.63
USP39-213ENST00000467885 UNKLQ9H9P5 680 aaKnown RBP4.87□□□□□ -1.63
USP39-213ENST00000467885 ZNF286AQ9HBT8 521 aa4.87□□□□□ -1.63
USP39-213ENST00000467885 PALMDQ9NP74 551 aa4.87□□□□□ -1.63
USP39-213ENST00000467885 IFT46Q9NQC8 304 aa4.87□□□□□ -1.63
USP39-213ENST00000467885 OR2S2Q9NQN1 319 aa4.87□□□□□ -1.63
USP39-213ENST00000467885 NECAP2Q9NVZ3 263 aa4.87□□□□□ -1.63
USP39-213ENST00000467885 CALYQ9NYX4 217 aa4.87□□□□□ -1.63
USP39-213ENST00000467885 IDI2-AS1Q9NZ38 188 aa4.87□□□□□ -1.63
USP39-213ENST00000467885 OR1A1Q9P1Q5 309 aa4.87□□□□□ -1.63
USP39-213ENST00000467885 GPR132Q9UNW8 380 aa4.87□□□□□ -1.63
USP39-213ENST00000467885 GAB2Q9UQC2 676 aa4.87□□□□□ -1.63
USP39-213ENST00000467885 INSIG2Q9Y5U4 225 aa4.87□□□□□ -1.63
USP39-213ENST00000467885 NAV2Q8IVL1 2488 aa4.86□□□□□ -1.63
USP39-213ENST00000467885 CSMD2Q7Z408 3487 aa4.86□□□□□ -1.63
USP39-213ENST00000467885 IGHV3-43A0A0B4J1X8 118 aa4.86□□□□□ -1.63
USP39-213ENST00000467885 IGHV2-70DA0A0C4DH43 119 aa4.86□□□□□ -1.63
USP39-213ENST00000467885 NAP1L6A6NFF2 107 aa4.86□□□□□ -1.63
USP39-213ENST00000467885 OR5H14A6NHG9 310 aa4.86□□□□□ -1.63
USP39-213ENST00000467885 B4DSR2 109 aa4.86□□□□□ -1.63
USP39-213ENST00000467885 ITGB1BP1O14713 200 aa4.86□□□□□ -1.63
USP39-213ENST00000467885 SPINT2O43291 252 aa4.86□□□□□ -1.63
USP39-213ENST00000467885 LYRM1O43325 122 aa4.86□□□□□ -1.63
USP39-213ENST00000467885 IGLV2-14P01704 120 aa4.86□□□□□ -1.63
USP39-213ENST00000467885 IGHV1-8P0DP01 117 aa4.86□□□□□ -1.63
USP39-213ENST00000467885 IGHV3-43DP0DP04 118 aa4.86□□□□□ -1.63
USP39-213ENST00000467885 IGHV4-31P0DP07 118 aa4.86□□□□□ -1.63
USP39-213ENST00000467885 MMP9P14780 707 aa4.86□□□□□ -1.63
USP39-213ENST00000467885 SPNP16150 400 aa4.86□□□□□ -1.63
USP39-213ENST00000467885 NFYAP23511 347 aaPredicted RBP4.86□□□□□ -1.63
USP39-213ENST00000467885 ZBTB25P24278 435 aa4.86□□□□□ -1.63
USP39-213ENST00000467885 CD34P28906 385 aa4.86□□□□□ -1.63
USP39-213ENST00000467885 SLC6A1P30531 599 aa4.86□□□□□ -1.63
USP39-213ENST00000467885 GNRHRP30968 328 aa4.86□□□□□ -1.63
USP39-213ENST00000467885 FCGR2CP31995 323 aa4.86□□□□□ -1.63
USP39-213ENST00000467885 CCR6P51684 374 aa4.86□□□□□ -1.63
USP39-213ENST00000467885 DVL1P1P54792 670 aaPredicted RBP4.86□□□□□ -1.63
USP39-213ENST00000467885 UCP3P55916 312 aa4.86□□□□□ -1.63
USP39-213ENST00000467885 DLX1P56177 255 aa4.86□□□□□ -1.63
USP39-213ENST00000467885 TAS2R46P59540 309 aa4.86□□□□□ -1.63
USP39-213ENST00000467885 AP3S2P59780 193 aa4.86□□□□□ -1.63
USP39-213ENST00000467885 HLA-DRB3P79483 266 aa4.86□□□□□ -1.63
USP39-213ENST00000467885 GNMTQ14749 295 aa4.86□□□□□ -1.63
USP39-213ENST00000467885 RNASE10Q5GAN6 216 aaKnown RBP4.86□□□□□ -1.63
USP39-213ENST00000467885 C6orf183Q5T699 404 aa4.86□□□□□ -1.63
USP39-213ENST00000467885 FAAP20Q6NZ36 180 aa4.86□□□□□ -1.63
USP39-213ENST00000467885 C16orf87Q6PH81 154 aa4.86□□□□□ -1.63
USP39-213ENST00000467885 TRAT1Q6PIZ9 186 aa4.86□□□□□ -1.63
USP39-213ENST00000467885 MOB1BQ7L9L4 216 aa4.86□□□□□ -1.63
USP39-213ENST00000467885 NRARPQ7Z6K4 114 aa4.86□□□□□ -1.63
USP39-213ENST00000467885 FAM185AQ8N0U4 392 aa4.86□□□□□ -1.63
USP39-213ENST00000467885 PRR18Q8N4B5 295 aa4.86□□□□□ -1.63
USP39-213ENST00000467885 ARRDC1Q8N5I2 433 aa4.86□□□□□ -1.63
USP39-213ENST00000467885 LINC01356Q8N9X3 169 aa4.86□□□□□ -1.63
USP39-213ENST00000467885 POC5Q8NA72 575 aa4.86□□□□□ -1.63
USP39-213ENST00000467885 ZNF439Q8NDP4 499 aa4.86□□□□□ -1.63
USP39-213ENST00000467885 OR51S1Q8NGJ8 323 aa4.86□□□□□ -1.63
USP39-213ENST00000467885 OR5H2Q8NGV7 314 aa4.86□□□□□ -1.63
USP39-213ENST00000467885 OR10J5Q8NHC4 309 aa4.86□□□□□ -1.63
USP39-213ENST00000467885 ZNF596Q8TC21 504 aa4.86□□□□□ -1.63
USP39-213ENST00000467885 IL1F10Q8WWZ1 152 aa4.86□□□□□ -1.63
USP39-213ENST00000467885 RAB39BQ96DA2 213 aa4.86□□□□□ -1.63
USP39-213ENST00000467885 AJUBAQ96IF1 538 aa4.86□□□□□ -1.63
USP39-213ENST00000467885 ZNF714Q96N38 554 aa4.86□□□□□ -1.63
USP39-213ENST00000467885 C7orf50Q9BRJ6 194 aaKnown RBP4.86□□□□□ -1.63
USP39-213ENST00000467885 RTBDNQ9BSG5 229 aaPredicted RBP4.86□□□□□ -1.63
USP39-213ENST00000467885 GFOD1Q9NXC2 390 aa4.86□□□□□ -1.63
USP39-213ENST00000467885 RDH8Q9NYR8 311 aa4.86□□□□□ -1.63
USP39-213ENST00000467885 LPAR3Q9UBY5 353 aa4.86□□□□□ -1.63
USP39-213ENST00000467885 ITGB1BP2Q9UKP3 347 aa4.86□□□□□ -1.63
USP39-213ENST00000467885 PSG11Q9UQ72 335 aa4.86□□□□□ -1.63
USP39-213ENST00000467885 OR2W1Q9Y3N9 320 aa4.86□□□□□ -1.63
USP39-213ENST00000467885 MALRD1Q5VYJ5 2156 aa4.86□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 80.6 ms