RNA–Protein interactions for RNA: ENST00000430570.5

CPNE1-212, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,332 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-212ENST00000430570 HLA-DRB3P79483 266 aa20.33■□□□□ 0.85
CPNE1-212ENST00000430570 MRPS15P82914 257 aaKnown RBP20.33■□□□□ 0.85
CPNE1-212ENST00000430570 NUDCD2Q8WVJ2 157 aa20.33■□□□□ 0.85
CPNE1-212ENST00000430570 GALMQ96C23 342 aa20.33■□□□□ 0.85
CPNE1-212ENST00000430570 S100A16Q96FQ6 103 aaKnown RBP20.33■□□□□ 0.85
CPNE1-212ENST00000430570 MMP28Q9H239 520 aa20.33■□□□□ 0.85
CPNE1-212ENST00000430570 OR2S2Q9NQN1 319 aa20.33■□□□□ 0.85
CPNE1-212ENST00000430570 GNG12Q9UBI6 72 aa20.33■□□□□ 0.85
CPNE1-212ENST00000430570 HILPDAQ9Y5L2 63 aa20.33■□□□□ 0.85
CPNE1-212ENST00000430570 A0A0A6YYH2 397 aa20.32■□□□□ 0.84
CPNE1-212ENST00000430570 A6NJ64 397 aa20.32■□□□□ 0.84
CPNE1-212ENST00000430570 POM121CA8CG34 1229 aa20.32■□□□□ 0.84
CPNE1-212ENST00000430570 BUB1B-PAK6H3BSN5 160 aa20.32■□□□□ 0.84
CPNE1-212ENST00000430570 SLC31A2O15432 143 aa20.32■□□□□ 0.84
CPNE1-212ENST00000430570 PTHLHP12272 177 aa20.32■□□□□ 0.84
CPNE1-212ENST00000430570 HTD2P86397 168 aa20.32■□□□□ 0.84
CPNE1-212ENST00000430570 ZNF439Q8NDP4 499 aa20.32■□□□□ 0.84
CPNE1-212ENST00000430570 IL1F10Q8WWZ1 152 aa20.32■□□□□ 0.84
CPNE1-212ENST00000430570 DPM3Q9P2X0 92 aa20.32■□□□□ 0.84
CPNE1-212ENST00000430570 CCDC160A6NGH7 325 aa20.31■□□□□ 0.84
CPNE1-212ENST00000430570 LY6LH3BQJ8 138 aa20.31■□□□□ 0.84
CPNE1-212ENST00000430570 XRCC3O43542 346 aa20.31■□□□□ 0.84
CPNE1-212ENST00000430570 SSX5O60225 188 aa20.31■□□□□ 0.84
CPNE1-212ENST00000430570 ZNF134P52741 427 aa20.31■□□□□ 0.84
CPNE1-212ENST00000430570 PNLIPRP3Q17RR3 467 aa20.31■□□□□ 0.84
CPNE1-212ENST00000430570 TMEM30BQ3MIR4 351 aa20.31■□□□□ 0.84
CPNE1-212ENST00000430570 MORN2Q502X0 79 aa20.31■□□□□ 0.84
CPNE1-212ENST00000430570 PLA1AQ53H76 456 aa20.31■□□□□ 0.84
CPNE1-212ENST00000430570 AP3S1Q92572 193 aa20.31■□□□□ 0.84
CPNE1-212ENST00000430570 AUNIPQ9H7T9 357 aa20.31■□□□□ 0.84
CPNE1-212ENST00000430570 MGAT4AQ9UM21 535 aa20.31■□□□□ 0.84
CPNE1-212ENST00000430570 IGKV1D-8A0A087WSZ0 117 aa20.3■□□□□ 0.84
CPNE1-212ENST00000430570 TRDCB7Z8K6 153 aa20.3■□□□□ 0.84
CPNE1-212ENST00000430570 ELK1P19419 428 aa20.3■□□□□ 0.84
CPNE1-212ENST00000430570 PPP1CCP36873 323 aaKnown RBP20.3■□□□□ 0.84
CPNE1-212ENST00000430570 TALDO1P37837 337 aa20.3■□□□□ 0.84
CPNE1-212ENST00000430570 KRTAP24-1Q3LI83 254 aa20.3■□□□□ 0.84
CPNE1-212ENST00000430570 MZT2AQ6P582 158 aa20.3■□□□□ 0.84
CPNE1-212ENST00000430570 SSMEM1Q8WWF3 244 aa20.3■□□□□ 0.84
CPNE1-212ENST00000430570 CMTM3Q96MX0 182 aa20.3■□□□□ 0.84
CPNE1-212ENST00000430570 SSX3Q99909 188 aa20.3■□□□□ 0.84
CPNE1-212ENST00000430570 JPT1Q9UK76 154 aa20.3■□□□□ 0.84
CPNE1-212ENST00000430570 IGKV1-6A0A0C4DH72 117 aa20.29■□□□□ 0.84
CPNE1-212ENST00000430570 LEUTXA8MZ59 168 aa20.29■□□□□ 0.84
CPNE1-212ENST00000430570 CLDN34H7C241 214 aa20.29■□□□□ 0.84
CPNE1-212ENST00000430570 APOA1P02647 267 aa20.29■□□□□ 0.84
CPNE1-212ENST00000430570 GSTT2P0CG29 244 aa20.29■□□□□ 0.84
CPNE1-212ENST00000430570 GSTT2BP0CG30 244 aa20.29■□□□□ 0.84
CPNE1-212ENST00000430570 SOX6P35712 828 aa20.29■□□□□ 0.84
CPNE1-212ENST00000430570 GNG2P59768 71 aa20.29■□□□□ 0.84
CPNE1-212ENST00000430570 DIAPH2-AS1Q14236 149 aa20.29■□□□□ 0.84
CPNE1-212ENST00000430570 CT45A1Q5HYN5 189 aa20.29■□□□□ 0.84
CPNE1-212ENST00000430570 LINC00311Q8N616 119 aa20.29■□□□□ 0.84
CPNE1-212ENST00000430570 CT45A3Q8NHU0 189 aa20.29■□□□□ 0.84
CPNE1-212ENST00000430570 TRIM77I1YAP6 450 aa20.28■□□□□ 0.84
CPNE1-212ENST00000430570 YPEL1O60688 119 aa20.28■□□□□ 0.84
CPNE1-212ENST00000430570 RAB13P51153 203 aa20.28■□□□□ 0.84
CPNE1-212ENST00000430570 HERPUD1Q15011 391 aa20.28■□□□□ 0.84
CPNE1-212ENST00000430570 Q3ZCU0 254 aa20.28■□□□□ 0.84
CPNE1-212ENST00000430570 TPTE2P1Q5T6R2 138 aa20.28■□□□□ 0.84
CPNE1-212ENST00000430570 TMEM86BQ8N661 226 aa20.28■□□□□ 0.84
CPNE1-212ENST00000430570 C8orf31Q8N9H6 132 aa20.28■□□□□ 0.84
CPNE1-212ENST00000430570 PIFOQ8TCI5 191 aa20.28■□□□□ 0.84
CPNE1-212ENST00000430570 YPEL2Q96QA6 119 aa20.28■□□□□ 0.84
CPNE1-212ENST00000430570 ST6GALNAC5Q9BVH7 336 aa20.28■□□□□ 0.84
CPNE1-212ENST00000430570 CHIAQ9BZP6 476 aa20.28■□□□□ 0.84
CPNE1-212ENST00000430570 CCDC59Q9P031 241 aaKnown RBP20.28■□□□□ 0.84
CPNE1-212ENST00000430570 OR1A1Q9P1Q5 309 aa20.28■□□□□ 0.84
CPNE1-212ENST00000430570 RSL24D1Q9UHA3 163 aaKnown RBP20.28■□□□□ 0.84
CPNE1-212ENST00000430570 FABP7O15540 132 aa20.27■□□□□ 0.84
CPNE1-212ENST00000430570 DTYMKP23919 212 aa20.27■□□□□ 0.84
CPNE1-212ENST00000430570 TAS2R20P59543 309 aa20.27■□□□□ 0.84
CPNE1-212ENST00000430570 PITPNAQ00169 270 aa20.27■□□□□ 0.84
CPNE1-212ENST00000430570 LRRC75BQ2VPJ9 315 aa20.27■□□□□ 0.84
CPNE1-212ENST00000430570 TMEM69Q5SWH9 247 aa20.27■□□□□ 0.84
CPNE1-212ENST00000430570 SLC25A48Q6ZT89 311 aaKnown RBP20.27■□□□□ 0.84
CPNE1-212ENST00000430570 OR10X1Q8NGY0 326 aa20.27■□□□□ 0.84
CPNE1-212ENST00000430570 OCSTAMPQ9BR26 566 aa20.27■□□□□ 0.84
CPNE1-212ENST00000430570 PARP12Q9H0J9 701 aaKnown RBP20.27■□□□□ 0.84
CPNE1-212ENST00000430570 MIXL1Q9H2W2 232 aa20.27■□□□□ 0.84
CPNE1-212ENST00000430570 DPAGT1Q9H3H5 408 aa20.27■□□□□ 0.84
CPNE1-212ENST00000430570 SLC23A1Q9UHI7 598 aa20.27■□□□□ 0.84
CPNE1-212ENST00000430570 POMT1Q9Y6A1 747 aa20.27■□□□□ 0.84
CPNE1-212ENST00000430570 H3BUX3 64 aa20.27■□□□□ 0.83
CPNE1-212ENST00000430570 CTDSP2O14595 271 aa20.27■□□□□ 0.83
CPNE1-212ENST00000430570 RNASE1P07998 156 aaKnown RBP20.27■□□□□ 0.83
CPNE1-212ENST00000430570 MADCAM1Q13477 382 aa20.27■□□□□ 0.83
CPNE1-212ENST00000430570 SRSF7Q16629 238 aaKnown RBP eCLIP20.27■□□□□ 0.831e-7■□□□□ 9.8
CPNE1-212ENST00000430570 IGSF11Q5DX21 431 aa20.27■□□□□ 0.83
CPNE1-212ENST00000430570 Q6ZS49 121 aa20.27■□□□□ 0.83
CPNE1-212ENST00000430570 CREB3L1Q96BA8 519 aa20.27■□□□□ 0.83
CPNE1-212ENST00000430570 AMMECR1Q9Y4X0 333 aaPredicted RBP20.27■□□□□ 0.83
CPNE1-212ENST00000430570 VGLL3A8MV65 326 aa20.26■□□□□ 0.83
CPNE1-212ENST00000430570 HLA-DQB1P01920 261 aa20.26■□□□□ 0.83
CPNE1-212ENST00000430570 MNDAP41218 407 aa20.26■□□□□ 0.83
CPNE1-212ENST00000430570 KIR2DS4P43632 304 aa20.26■□□□□ 0.83
CPNE1-212ENST00000430570 KIR2DS1Q14954 304 aa20.26■□□□□ 0.83
CPNE1-212ENST00000430570 AANATQ16613 207 aa20.26■□□□□ 0.83
CPNE1-212ENST00000430570 KRTAP21-3Q3LHN1 58 aa20.26■□□□□ 0.83
CPNE1-212ENST00000430570 STEAP3Q658P3 488 aa20.26■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 76.6 ms