RNA–Protein interactions for RNA: ENST00000406327.2

HMGB3P18-201, Transcript of high mobility group box 3 pseudogene 18, humanhuman

BASIC

Gene HMGB3P18, Length 590 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P18-201ENST00000406327 CA11O75493 328 aa3.23□□□□□ -1.89
HMGB3P18-201ENST00000406327 RAB36O95755 333 aa3.23□□□□□ -1.89
HMGB3P18-201ENST00000406327 TGM6O95932 706 aa3.23□□□□□ -1.89
HMGB3P18-201ENST00000406327 HMGN1P05114 100 aa3.23□□□□□ -1.89
HMGB3P18-201ENST00000406327 DBIP07108 87 aaKnown RBP3.23□□□□□ -1.89
HMGB3P18-201ENST00000406327 GUSBP08236 651 aa3.23□□□□□ -1.89
HMGB3P18-201ENST00000406327 TACSTD2P09758 323 aa3.23□□□□□ -1.89
HMGB3P18-201ENST00000406327 MYL12AP19105 171 aa3.23□□□□□ -1.89
HMGB3P18-201ENST00000406327 RAB3AP20336 220 aa3.23□□□□□ -1.89
HMGB3P18-201ENST00000406327 PTNP21246 168 aa3.23□□□□□ -1.89
HMGB3P18-201ENST00000406327 PSMA1P25786 263 aaKnown RBP3.23□□□□□ -1.89
HMGB3P18-201ENST00000406327 GABRA3P34903 492 aa3.23□□□□□ -1.89
HMGB3P18-201ENST00000406327 RANBP1P43487 201 aa3.23□□□□□ -1.89
HMGB3P18-201ENST00000406327 PSMD7P51665 324 aa3.23□□□□□ -1.89
HMGB3P18-201ENST00000406327 RND2P52198 227 aa3.23□□□□□ -1.89
HMGB3P18-201ENST00000406327 CLDN6P56747 220 aa3.23□□□□□ -1.89
HMGB3P18-201ENST00000406327 RAB38P57729 211 aa3.23□□□□□ -1.89
HMGB3P18-201ENST00000406327 ZNF121P58317 390 aaPredicted RBP3.23□□□□□ -1.89
HMGB3P18-201ENST00000406327 PPP1CAP62136 330 aa3.23□□□□□ -1.89
HMGB3P18-201ENST00000406327 PPP1CBP62140 327 aa3.23□□□□□ -1.89
HMGB3P18-201ENST00000406327 ARG2P78540 354 aa3.23□□□□□ -1.89
HMGB3P18-201ENST00000406327 PRKCDQ05655 676 aa3.23□□□□□ -1.89
HMGB3P18-201ENST00000406327 MLLT11Q13015 90 aaPredicted RBP3.23□□□□□ -1.89
HMGB3P18-201ENST00000406327 ERCC8Q13216 396 aa3.23□□□□□ -1.89
HMGB3P18-201ENST00000406327 TPBGQ13641 420 aa3.23□□□□□ -1.89
HMGB3P18-201ENST00000406327 C1DQ13901 141 aaKnown RBP3.23□□□□□ -1.89
HMGB3P18-201ENST00000406327 OR1Q1Q15612 314 aa3.23□□□□□ -1.89
HMGB3P18-201ENST00000406327 POU2AF1Q16633 256 aa3.23□□□□□ -1.89
HMGB3P18-201ENST00000406327 DGAT2L6Q6ZPD8 337 aa3.23□□□□□ -1.89
HMGB3P18-201ENST00000406327 SLC35D2Q76EJ3 337 aa3.23□□□□□ -1.89
HMGB3P18-201ENST00000406327 OOSP2Q86WS3 158 aa3.23□□□□□ -1.89
HMGB3P18-201ENST00000406327 SNX29P2Q8IUI4 249 aa3.23□□□□□ -1.89
HMGB3P18-201ENST00000406327 CA13Q8N1Q1 262 aa3.23□□□□□ -1.89
HMGB3P18-201ENST00000406327 CLDN22Q8N7P3 220 aa3.23□□□□□ -1.89
HMGB3P18-201ENST00000406327 COX18Q8N8Q8 333 aa3.23□□□□□ -1.89
HMGB3P18-201ENST00000406327 GATSQ8NAP1 163 aa3.23□□□□□ -1.89
HMGB3P18-201ENST00000406327 MDS2Q8NDY4 140 aa3.23□□□□□ -1.89
HMGB3P18-201ENST00000406327 NOXO1Q8NFA2 376 aa3.23□□□□□ -1.89
HMGB3P18-201ENST00000406327 OR9Q1Q8NGQ5 310 aa3.23□□□□□ -1.89
HMGB3P18-201ENST00000406327 DOK4Q8TEW6 326 aa3.23□□□□□ -1.89
HMGB3P18-201ENST00000406327 PRSS27Q9BQR3 290 aa3.23□□□□□ -1.89
HMGB3P18-201ENST00000406327 HDHD3Q9BSH5 251 aaPredicted RBP3.23□□□□□ -1.89
HMGB3P18-201ENST00000406327 PRRG3Q9BZD7 231 aa3.23□□□□□ -1.89
HMGB3P18-201ENST00000406327 GAL3ST2Q9H3Q3 398 aa3.23□□□□□ -1.89
HMGB3P18-201ENST00000406327 UCK1Q9HA47 277 aa3.23□□□□□ -1.89
HMGB3P18-201ENST00000406327 PATZ1Q9HBE1 687 aaKnown RBP3.23□□□□□ -1.89
HMGB3P18-201ENST00000406327 FAM60AQ9NP50 221 aa3.23□□□□□ -1.89
HMGB3P18-201ENST00000406327 NDUFB11Q9NX14 153 aa3.23□□□□□ -1.89
HMGB3P18-201ENST00000406327 RHBDL2Q9NX52 303 aa3.23□□□□□ -1.89
HMGB3P18-201ENST00000406327 SLC39A1Q9NY26 324 aa3.23□□□□□ -1.89
HMGB3P18-201ENST00000406327 MAT2BQ9NZL9 334 aa3.23□□□□□ -1.89
HMGB3P18-201ENST00000406327 ZNF223Q9UK11 482 aaPredicted RBP3.23□□□□□ -1.89
HMGB3P18-201ENST00000406327 NDRG2Q9UN36 371 aaKnown RBP3.23□□□□□ -1.89
HMGB3P18-201ENST00000406327 FLVCR2Q9UPI3 526 aa3.23□□□□□ -1.89
HMGB3P18-201ENST00000406327 CFL2Q9Y281 166 aa3.23□□□□□ -1.89
HMGB3P18-201ENST00000406327 ZFC3H1O60293 1989 aaKnown RBP3.23□□□□□ -1.89
HMGB3P18-201ENST00000406327 MTCL1Q9Y4B5 1905 aaKnown RBP3.23□□□□□ -1.89
HMGB3P18-201ENST00000406327 CHD9Q3L8U1 2897 aa3.22□□□□□ -1.89
HMGB3P18-201ENST00000406327 IGHV1OR15-9A0A0B4J2B8 117 aa3.22□□□□□ -1.89
HMGB3P18-201ENST00000406327 IGHV3-66A0A0C4DH42 116 aa3.22□□□□□ -1.89
HMGB3P18-201ENST00000406327 PNMA8CA0A1B0GUJ8 204 aa3.22□□□□□ -1.89
HMGB3P18-201ENST00000406327 SLC22A20A6NK97 555 aa3.22□□□□□ -1.89
HMGB3P18-201ENST00000406327 ZNF670-ZNF695F2Z2N8 137 aa3.22□□□□□ -1.89
HMGB3P18-201ENST00000406327 NDUFS8O00217 210 aa3.22□□□□□ -1.89
HMGB3P18-201ENST00000406327 CDC42EP2O14613 210 aa3.22□□□□□ -1.89
HMGB3P18-201ENST00000406327 ZNF861PO60384 105 aa3.22□□□□□ -1.89
HMGB3P18-201ENST00000406327 CTNSO60931 367 aa3.22□□□□□ -1.89
HMGB3P18-201ENST00000406327 SS18L1O75177 396 aaPredicted RBP3.22□□□□□ -1.89
HMGB3P18-201ENST00000406327 MPDU1O75352 247 aa3.22□□□□□ -1.89
HMGB3P18-201ENST00000406327 RDH16O75452 317 aa3.22□□□□□ -1.89
HMGB3P18-201ENST00000406327 UPK1BO75841 260 aa3.22□□□□□ -1.89
HMGB3P18-201ENST00000406327 KCNK2O95069 426 aa3.22□□□□□ -1.89
HMGB3P18-201ENST00000406327 RCBTB2O95199 551 aa3.22□□□□□ -1.89
HMGB3P18-201ENST00000406327 IGLV2-23P01705 113 aa3.22□□□□□ -1.89
HMGB3P18-201ENST00000406327 TSPAN19P0C672 248 aa3.22□□□□□ -1.89
HMGB3P18-201ENST00000406327 LIMS3P0CW19 117 aa3.22□□□□□ -1.89
HMGB3P18-201ENST00000406327 LIMS4P0CW20 117 aa3.22□□□□□ -1.89
HMGB3P18-201ENST00000406327 IL32P24001 234 aa3.22□□□□□ -1.89
HMGB3P18-201ENST00000406327 S100A5P33763 92 aa3.22□□□□□ -1.89
HMGB3P18-201ENST00000406327 ETV6P41212 452 aa3.22□□□□□ -1.89
HMGB3P18-201ENST00000406327 NBL1P41271 181 aa3.22□□□□□ -1.89
HMGB3P18-201ENST00000406327 GPR4P46093 362 aa3.22□□□□□ -1.89
HMGB3P18-201ENST00000406327 P2RX1P51575 399 aa3.22□□□□□ -1.89
HMGB3P18-201ENST00000406327 FXYD6P3P58550 94 aa3.22□□□□□ -1.89
HMGB3P18-201ENST00000406327 UBE2NP61088 152 aaKnown RBP3.22□□□□□ -1.89
HMGB3P18-201ENST00000406327 COPZ1P61923 177 aa3.22□□□□□ -1.89
HMGB3P18-201ENST00000406327 SKP1P63208 163 aa3.22□□□□□ -1.89
HMGB3P18-201ENST00000406327 CDC20Q12834 499 aa3.22□□□□□ -1.89
HMGB3P18-201ENST00000406327 FAM53BQ14153 422 aa3.22□□□□□ -1.89
HMGB3P18-201ENST00000406327 ELOCQ15369 112 aa3.22□□□□□ -1.89
HMGB3P18-201ENST00000406327 ZNF141Q15928 474 aa3.22□□□□□ -1.89
HMGB3P18-201ENST00000406327 ZNF181Q2M3W8 571 aa3.22□□□□□ -1.89
HMGB3P18-201ENST00000406327 DEFB110Q30KQ9 67 aa3.22□□□□□ -1.89
HMGB3P18-201ENST00000406327 CLEC12AQ5QGZ9 265 aa3.22□□□□□ -1.89
HMGB3P18-201ENST00000406327 CHCHD2P9Q5T1J5 151 aaPredicted RBP3.22□□□□□ -1.89
HMGB3P18-201ENST00000406327 MRPL2Q5T653 305 aaKnown RBP3.22□□□□□ -1.89
HMGB3P18-201ENST00000406327 NXNL2Q5VZ03 156 aa3.22□□□□□ -1.89
HMGB3P18-201ENST00000406327 PLEKHG7Q6ZR37 379 aa3.22□□□□□ -1.89
HMGB3P18-201ENST00000406327 Q6ZS52 159 aa3.22□□□□□ -1.89
HMGB3P18-201ENST00000406327 CBLN2Q8IUK8 224 aa3.22□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms