RNA–Protein interactions for RNA: ENST00000397276.6

PABPN1-202, Transcript of poly(A) binding protein nuclear 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PABPN1, Length 2,768 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-202ENST00000397276 URGCP-MRPS24S4R325 110 aa20.16■□□□□ 0.82
PABPN1-202ENST00000397276 BORCS7-ASMTA0A0B4J1R7 106 aa20.16■□□□□ 0.82
PABPN1-202ENST00000397276 H0YL77 283 aa20.16■□□□□ 0.82
PABPN1-202ENST00000397276 NDUFA6P56556 154 aa20.16■□□□□ 0.82
PABPN1-202ENST00000397276 CXorf67Q86X51 503 aaPredicted RBP20.16■□□□□ 0.82
PABPN1-202ENST00000397276 TMEM56Q96MV1 263 aa20.16■□□□□ 0.82
PABPN1-202ENST00000397276 GINS3Q9BRX5 216 aa20.16■□□□□ 0.82
PABPN1-202ENST00000397276 RTL8AQ9BWD3 113 aa20.16■□□□□ 0.82
PABPN1-202ENST00000397276 TMEM56-RWDD3S4R434 201 aa20.16■□□□□ 0.82
PABPN1-202ENST00000397276 J3QT63 122 aa20.15■□□□□ 0.82
PABPN1-202ENST00000397276 TGFBR3Q03167 851 aa20.15■□□□□ 0.82
PABPN1-202ENST00000397276 SRSF7Q16629 238 aaKnown RBP eCLIP20.15■□□□□ 0.824e-7■□□□□ 8
PABPN1-202ENST00000397276 GPR157Q5UAW9 335 aa20.15■□□□□ 0.82
PABPN1-202ENST00000397276 HEPN1Q6WQI6 88 aa20.15■□□□□ 0.82
PABPN1-202ENST00000397276 PFDN5Q99471 154 aa20.15■□□□□ 0.82
PABPN1-202ENST00000397276 CDRT15L2A8MXV6 281 aa20.15■□□□□ 0.82
PABPN1-202ENST00000397276 PGLYRP1O75594 196 aaPredicted RBP20.15■□□□□ 0.82
PABPN1-202ENST00000397276 RAB2AP61019 212 aa20.15■□□□□ 0.82
PABPN1-202ENST00000397276 EWSR1Q01844 656 aaKnown RBP eCLIP20.15■□□□□ 0.823e-7■□□□□ 8.4
PABPN1-202ENST00000397276 MRPL49Q13405 166 aaKnown RBP20.15■□□□□ 0.82
PABPN1-202ENST00000397276 MALSU1Q96EH3 234 aa20.15■□□□□ 0.82
PABPN1-202ENST00000397276 YPEL4Q96NS1 127 aa20.15■□□□□ 0.82
PABPN1-202ENST00000397276 CDS2O95674 445 aa20.14■□□□□ 0.82
PABPN1-202ENST00000397276 CTXN2P0C2S0 81 aa20.14■□□□□ 0.82
PABPN1-202ENST00000397276 SRPXP78539 464 aa20.14■□□□□ 0.82
PABPN1-202ENST00000397276 RHEBQ15382 184 aa20.14■□□□□ 0.82
PABPN1-202ENST00000397276 OR2C3Q8N628 320 aa20.14■□□□□ 0.82
PABPN1-202ENST00000397276 PKIBQ9C010 78 aa20.14■□□□□ 0.82
PABPN1-202ENST00000397276 OR2H2O95918 312 aa20.14■□□□□ 0.81
PABPN1-202ENST00000397276 EPHA1P21709 976 aa20.14■□□□□ 0.81
PABPN1-202ENST00000397276 ZNF154Q13106 437 aa20.14■□□□□ 0.81
PABPN1-202ENST00000397276 HAGHQ16775 308 aa20.14■□□□□ 0.81
PABPN1-202ENST00000397276 IZUMO4Q1ZYL8 232 aa20.14■□□□□ 0.81
PABPN1-202ENST00000397276 VWA1Q6PCB0 445 aa20.14■□□□□ 0.81
PABPN1-202ENST00000397276 FAM214BQ7L5A3 538 aa20.14■□□□□ 0.81
PABPN1-202ENST00000397276 PLPPR1Q8TBJ4 325 aa20.14■□□□□ 0.81
PABPN1-202ENST00000397276 RIMS4Q9H426 269 aaPredicted RBP20.14■□□□□ 0.81
PABPN1-202ENST00000397276 OTOGLQ3ZCN5 2332 aa20.13■□□□□ 0.81
PABPN1-202ENST00000397276 CEBPDP49716 269 aaPredicted RBP20.13■□□□□ 0.81
PABPN1-202ENST00000397276 PDZD11Q5EBL8 140 aa20.13■□□□□ 0.81
PABPN1-202ENST00000397276 SOHLH1Q5JUK2 328 aa20.13■□□□□ 0.81
PABPN1-202ENST00000397276 Q6P435 159 aa20.13■□□□□ 0.81
PABPN1-202ENST00000397276 BOD1Q96IK1 185 aa20.13■□□□□ 0.81
PABPN1-202ENST00000397276 OR14J1Q9UGF5 321 aa20.13■□□□□ 0.81
PABPN1-202ENST00000397276 IFNA17P01571 189 aa20.13■□□□□ 0.81
PABPN1-202ENST00000397276 LMO1P25800 156 aa20.13■□□□□ 0.81
PABPN1-202ENST00000397276 HLA-DRB3P79483 266 aa20.13■□□□□ 0.81
PABPN1-202ENST00000397276 PSG7Q13046 419 aa20.13■□□□□ 0.81
PABPN1-202ENST00000397276 LINC00596Q86U02 117 aa20.13■□□□□ 0.81
PABPN1-202ENST00000397276 CLCF1Q9UBD9 225 aa20.13■□□□□ 0.81
PABPN1-202ENST00000397276 FZR1Q9UM11 496 aa20.13■□□□□ 0.81
PABPN1-202ENST00000397276 OR2W1Q9Y3N9 320 aa20.13■□□□□ 0.81
PABPN1-202ENST00000397276 NXPH2O95156 264 aa20.12■□□□□ 0.81
PABPN1-202ENST00000397276 HOXA5P20719 270 aa20.12■□□□□ 0.81
PABPN1-202ENST00000397276 MPV17P39210 176 aa20.12■□□□□ 0.81
PABPN1-202ENST00000397276 RND3P61587 244 aa20.12■□□□□ 0.81
PABPN1-202ENST00000397276 ZNF324BQ6AW86 544 aaPredicted RBP20.12■□□□□ 0.81
PABPN1-202ENST00000397276 PIP4P1Q86T03 277 aa20.12■□□□□ 0.81
PABPN1-202ENST00000397276 TMEM217Q8N7C4 229 aa20.12■□□□□ 0.81
PABPN1-202ENST00000397276 TRAPPC2LQ9UL33 140 aa20.12■□□□□ 0.81
PABPN1-202ENST00000397276 RBM7Q9Y580 266 aaKnown RBP20.12■□□□□ 0.81
PABPN1-202ENST00000397276 SVILO95425 2214 aa20.12■□□□□ 0.81
PABPN1-202ENST00000397276 IGSF23A1L1A6 192 aa20.12■□□□□ 0.81
PABPN1-202ENST00000397276 CXCL1P09341 107 aa20.12■□□□□ 0.81
PABPN1-202ENST00000397276 GABRA6Q16445 453 aa20.12■□□□□ 0.81
PABPN1-202ENST00000397276 GFI1BQ5VTD9 330 aa20.12■□□□□ 0.81
PABPN1-202ENST00000397276 COMMD1Q8N668 190 aa20.12■□□□□ 0.81
PABPN1-202ENST00000397276 ZNF383Q8NA42 475 aa20.12■□□□□ 0.81
PABPN1-202ENST00000397276 RHOVQ96L33 236 aa20.12■□□□□ 0.81
PABPN1-202ENST00000397276 DOK5Q9P104 306 aa20.12■□□□□ 0.81
PABPN1-202ENST00000397276 PROB1E7EW31 1015 aa20.12■□□□□ 0.81
PABPN1-202ENST00000397276 HSPA12AO43301 675 aa20.12■□□□□ 0.81
PABPN1-202ENST00000397276 CST7O76096 145 aa20.12■□□□□ 0.81
PABPN1-202ENST00000397276 SPNS3Q6ZMD2 512 aa20.12■□□□□ 0.81
PABPN1-202ENST00000397276 KDF1Q8NAX2 398 aaPredicted RBP20.12■□□□□ 0.81
PABPN1-202ENST00000397276 NBEAQ8NFP9 2946 aa20.11■□□□□ 0.81
PABPN1-202ENST00000397276 UCP1P25874 307 aa20.11■□□□□ 0.81
PABPN1-202ENST00000397276 GPX4P36969 197 aaPredicted RBP20.11■□□□□ 0.81
PABPN1-202ENST00000397276 MUCL1Q96DR8 90 aa20.11■□□□□ 0.81
PABPN1-202ENST00000397276 OBP2BQ9NPH6 170 aa20.11■□□□□ 0.81
PABPN1-202ENST00000397276 DMRT1Q9Y5R6 373 aa20.11■□□□□ 0.81
PABPN1-202ENST00000397276 PSG2P11465 335 aa20.11■□□□□ 0.81
PABPN1-202ENST00000397276 RAB5CP51148 216 aa20.11■□□□□ 0.81
PABPN1-202ENST00000397276 VAMP2P63027 116 aa20.11■□□□□ 0.81
PABPN1-202ENST00000397276 ASCL3Q9NQ33 180 aa20.11■□□□□ 0.81
PABPN1-202ENST00000397276 PPP1R3CQ9UQK1 317 aa20.11■□□□□ 0.81
PABPN1-202ENST00000397276 A0A0G2JRQ6 117 aa20.1■□□□□ 0.81
PABPN1-202ENST00000397276 LRP5LA4QPB2 252 aa20.1■□□□□ 0.81
PABPN1-202ENST00000397276 ZNF729A6NN14 1252 aaPredicted RBP20.1■□□□□ 0.81
PABPN1-202ENST00000397276 VDAC1P21796 283 aa20.1■□□□□ 0.81
PABPN1-202ENST00000397276 F2RP25116 425 aa20.1■□□□□ 0.81
PABPN1-202ENST00000397276 FOXF2Q12947 444 aa20.1■□□□□ 0.81
PABPN1-202ENST00000397276 DEFB109BQ30KR1 87 aa20.1■□□□□ 0.81
PABPN1-202ENST00000397276 ZNF826PQ6ZT77 177 aa20.1■□□□□ 0.81
PABPN1-202ENST00000397276 C9orf106Q8NAJ2 232 aa20.1■□□□□ 0.81
PABPN1-202ENST00000397276 SPIN2AQ99865 258 aa20.1■□□□□ 0.81
PABPN1-202ENST00000397276 SPIN2BQ9BPZ2 258 aa20.1■□□□□ 0.81
PABPN1-202ENST00000397276 TMEM50AO95807 157 aa20.1■□□□□ 0.81
PABPN1-202ENST00000397276 TFF1P04155 84 aa20.1■□□□□ 0.81
PABPN1-202ENST00000397276 ZNF16P17020 682 aaPredicted RBP20.1■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 110.8 ms