RNA–Protein interactions for RNA: ENST00000395066.7

CLK3-202, Transcript of CDC like kinase 3, humanhuman

TSL 1 (best) BASIC

Gene CLK3, Length 2,621 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-202ENST00000395066 FAM90A7PA6NKC0 464 aa17.54■□□□□ 0.4
CLK3-202ENST00000395066 OR5H1A6NKK0 313 aa17.54■□□□□ 0.4
CLK3-202ENST00000395066 FAM90A22PA8MWA6 464 aa17.54■□□□□ 0.4
CLK3-202ENST00000395066 FAM90A12PA8MX19 464 aa17.54■□□□□ 0.4
CLK3-202ENST00000395066 FAM90A5PA8MXJ8 464 aa17.54■□□□□ 0.4
CLK3-202ENST00000395066 FAM90A23PA8MXZ1 464 aa17.54■□□□□ 0.4
CLK3-202ENST00000395066 PTBP3O95758 552 aaKnown RBP17.54■□□□□ 0.4
CLK3-202ENST00000395066 CER1O95813 267 aa17.54■□□□□ 0.4
CLK3-202ENST00000395066 FAM90A15PP0C7V4 464 aa17.54■□□□□ 0.4
CLK3-202ENST00000395066 FAM90A13PP0C7W8 464 aa17.54■□□□□ 0.4
CLK3-202ENST00000395066 FAM90A14PP0C7W9 464 aa17.54■□□□□ 0.4
CLK3-202ENST00000395066 FAM90A24PP0C7X0 464 aa17.54■□□□□ 0.4
CLK3-202ENST00000395066 IAPPP10997 89 aa17.54■□□□□ 0.4
CLK3-202ENST00000395066 F2RP25116 425 aa17.54■□□□□ 0.4
CLK3-202ENST00000395066 KIR2DS4P43632 304 aa17.54■□□□□ 0.4
CLK3-202ENST00000395066 KIR2DS1Q14954 304 aa17.54■□□□□ 0.4
CLK3-202ENST00000395066 FAM180AQ6UWF9 173 aa17.54■□□□□ 0.4
CLK3-202ENST00000395066 NUFIP2Q7Z417 695 aaKnown RBP17.54■□□□□ 0.4
CLK3-202ENST00000395066 OR10G4Q8NGN3 311 aa17.54■□□□□ 0.4
CLK3-202ENST00000395066 ABHD5Q8WTS1 349 aa17.54■□□□□ 0.4
CLK3-202ENST00000395066 FRZBQ92765 325 aa17.54■□□□□ 0.4
CLK3-202ENST00000395066 IGKV3D-15A0A087WSY6 115 aa17.53■□□□□ 0.4
CLK3-202ENST00000395066 IGHEP01854 428 aa17.53■□□□□ 0.4
CLK3-202ENST00000395066 TDGF1P13385 188 aa17.53■□□□□ 0.4
CLK3-202ENST00000395066 CA6P23280 308 aa17.53■□□□□ 0.4
CLK3-202ENST00000395066 WNT5AP41221 380 aa17.53■□□□□ 0.4
CLK3-202ENST00000395066 HNF4GQ14541 408 aa17.53■□□□□ 0.4
CLK3-202ENST00000395066 C1orf87Q8N0U7 546 aa17.53■□□□□ 0.4
CLK3-202ENST00000395066 RNASE11Q8TAA1 199 aaKnown RBP17.53■□□□□ 0.4
CLK3-202ENST00000395066 C14orf144Q96I85 54 aa17.53■□□□□ 0.4
CLK3-202ENST00000395066 POM121L2Q96KW2 1035 aa17.53■□□□□ 0.4
CLK3-202ENST00000395066 HIST1H2AAQ96QV6 131 aa17.53■□□□□ 0.4
CLK3-202ENST00000395066 VSIRQ9H7M9 311 aa17.53■□□□□ 0.4
CLK3-202ENST00000395066 GNG13Q9P2W3 67 aa17.53■□□□□ 0.4
CLK3-202ENST00000395066 SPENQ96T58 3664 aaKnown RBP17.53■□□□□ 0.4
CLK3-202ENST00000395066 H0Y980 276 aa17.53■□□□□ 0.4
CLK3-202ENST00000395066 IL24Q13007 206 aa17.53■□□□□ 0.4
CLK3-202ENST00000395066 MPV17LQ2QL34 196 aa17.53■□□□□ 0.4
CLK3-202ENST00000395066 ZNF324BQ6AW86 544 aaPredicted RBP17.53■□□□□ 0.4
CLK3-202ENST00000395066 OR5D13Q8NGL4 314 aa17.53■□□□□ 0.4
CLK3-202ENST00000395066 PRSS50Q9UI38 385 aa17.53■□□□□ 0.4
CLK3-202ENST00000395066 FABP4P15090 132 aa17.52■□□□□ 0.4
CLK3-202ENST00000395066 RAB11AP62491 216 aa17.52■□□□□ 0.4
CLK3-202ENST00000395066 GAMTQ14353 236 aa17.52■□□□□ 0.4
CLK3-202ENST00000395066 OR10J5Q8NHC4 309 aa17.52■□□□□ 0.4
CLK3-202ENST00000395066 PPP1R3CQ9UQK1 317 aa17.52■□□□□ 0.4
CLK3-202ENST00000395066 ZNF16P17020 682 aaPredicted RBP17.52■□□□□ 0.4
CLK3-202ENST00000395066 FAM90A2PQ658T7 463 aa17.52■□□□□ 0.4
CLK3-202ENST00000395066 SLC25A24Q6NUK1 477 aa17.52■□□□□ 0.4
CLK3-202ENST00000395066 OR5P3Q8WZ94 311 aa17.52■□□□□ 0.4
CLK3-202ENST00000395066 APH1AQ96BI3 265 aa17.52■□□□□ 0.4
CLK3-202ENST00000395066 TNRC6AQ8NDV7 1962 aaKnown RBP17.52■□□□□ 0.4
CLK3-202ENST00000395066 TRAV1-1A0A0B4J248 108 aa17.51■□□□□ 0.39
CLK3-202ENST00000395066 IGKV1-39P01597 117 aa17.51■□□□□ 0.39
CLK3-202ENST00000395066 IGKV1D-39P04432 117 aa17.51■□□□□ 0.39
CLK3-202ENST00000395066 GTF3C1Q12789 2109 aa17.51■□□□□ 0.39
CLK3-202ENST00000395066 DNLZQ5SXM8 178 aa17.51■□□□□ 0.39
CLK3-202ENST00000395066 OR1K1Q8NGR3 316 aa17.51■□□□□ 0.39
CLK3-202ENST00000395066 TTTY12Q9BZ98 90 aa17.51■□□□□ 0.39
CLK3-202ENST00000395066 UFSP2Q9NUQ7 469 aa17.51■□□□□ 0.39
CLK3-202ENST00000395066 FOXJ2Q9P0K8 574 aa17.51■□□□□ 0.39
CLK3-202ENST00000395066 OR2W1Q9Y3N9 320 aa17.51■□□□□ 0.39
CLK3-202ENST00000395066 SYNGR4O95473 234 aa17.51■□□□□ 0.39
CLK3-202ENST00000395066 SERPINE2P07093 398 aa17.51■□□□□ 0.39
CLK3-202ENST00000395066 FGF8P55075 233 aaPredicted RBP17.51■□□□□ 0.39
CLK3-202ENST00000395066 OR8G1Q15617 311 aa17.51■□□□□ 0.39
CLK3-202ENST00000395066 SAXO1Q8IYX7 474 aa17.51■□□□□ 0.39
CLK3-202ENST00000395066 FAM173AQ9BQD7 235 aa17.51■□□□□ 0.39
CLK3-202ENST00000395066 LINC00470Q9BZP3 86 aa17.51■□□□□ 0.39
CLK3-202ENST00000395066 DLL3Q9NYJ7 618 aa17.51■□□□□ 0.39
CLK3-202ENST00000395066 CACNG5Q9UF02 275 aa17.51■□□□□ 0.39
CLK3-202ENST00000395066 CHD3Q12873 2000 aaKnown RBP17.51■□□□□ 0.39
CLK3-202ENST00000395066 B4E171 279 aa17.51■□□□□ 0.39
CLK3-202ENST00000395066 CLDN34H7C241 214 aa17.51■□□□□ 0.39
CLK3-202ENST00000395066 SIRPB1O00241 398 aa17.51■□□□□ 0.39
CLK3-202ENST00000395066 LAMTOR5O43504 91 aa17.51■□□□□ 0.39
CLK3-202ENST00000395066 DFFBO76075 338 aa17.51■□□□□ 0.39
CLK3-202ENST00000395066 SELEP16581 610 aa17.51■□□□□ 0.39
CLK3-202ENST00000395066 TSPAN7P41732 249 aa17.51■□□□□ 0.39
CLK3-202ENST00000395066 RND2P52198 227 aa17.51■□□□□ 0.39
CLK3-202ENST00000395066 HOXA4Q00056 320 aaPredicted RBP17.51■□□□□ 0.39
CLK3-202ENST00000395066 ARL16Q0P5N6 197 aa17.51■□□□□ 0.39
CLK3-202ENST00000395066 PNRC1Q12796 327 aaPredicted RBP17.51■□□□□ 0.39
CLK3-202ENST00000395066 OR1C1Q15619 314 aa17.51■□□□□ 0.39
CLK3-202ENST00000395066 STX12Q86Y82 276 aa17.51■□□□□ 0.39
CLK3-202ENST00000395066 OR5A2Q8NGI9 324 aa17.51■□□□□ 0.39
CLK3-202ENST00000395066 MRPS18CQ9Y3D5 142 aaKnown RBP17.51■□□□□ 0.39
CLK3-202ENST00000395066 DSPP15924 2871 aaKnown RBP17.5■□□□□ 0.39
CLK3-202ENST00000395066 A0A1W2PR80 420 aa17.5■□□□□ 0.39
CLK3-202ENST00000395066 METTL15P1P0C7V9 234 aa17.5■□□□□ 0.39
CLK3-202ENST00000395066 CD81P60033 236 aa17.5■□□□□ 0.39
CLK3-202ENST00000395066 TLE1Q04724 770 aa17.5■□□□□ 0.39
CLK3-202ENST00000395066 NRN1LQ496H8 165 aa17.5■□□□□ 0.39
CLK3-202ENST00000395066 C4orf17Q53FE4 359 aa17.5■□□□□ 0.39
CLK3-202ENST00000395066 H1FOOQ8IZA3 346 aaPredicted RBP17.5■□□□□ 0.39
CLK3-202ENST00000395066 FAM58AQ8N1B3 248 aa17.5■□□□□ 0.39
CLK3-202ENST00000395066 TMEM242Q9NWH2 141 aa17.5■□□□□ 0.39
CLK3-202ENST00000395066 ZFHX4Q86UP3 3567 aa17.5■□□□□ 0.39
CLK3-202ENST00000395066 ZFP92A6NM28 416 aa17.5■□□□□ 0.39
CLK3-202ENST00000395066 KIAA1324LA8MWY0 1029 aaPredicted RBP17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms