RNA–Protein interactions for RNA: ENST00000381753.8

LIMCH1-202, Transcript of LIM and calponin homology domains 1, humanhuman

TSL 1 (best) BASIC

Gene LIMCH1, Length 5,705 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMCH1-202ENST00000381753 RAE1P78406 368 aaKnown RBP7.88□□□□□ -1.15
LIMCH1-202ENST00000381753 GLDNQ6ZMI3 551 aaPredicted RBP7.88□□□□□ -1.15
LIMCH1-202ENST00000381753 TMEM219Q86XT9 240 aa7.88□□□□□ -1.15
LIMCH1-202ENST00000381753 BEND2Q8NDZ0 799 aa7.88□□□□□ -1.15
LIMCH1-202ENST00000381753 PACRGQ96M98 296 aaPredicted RBP7.88□□□□□ -1.15
LIMCH1-202ENST00000381753 HIGD1AQ9Y241 93 aa7.88□□□□□ -1.15
LIMCH1-202ENST00000381753 CACNA1EQ15878 2313 aa7.88□□□□□ -1.15
LIMCH1-202ENST00000381753 ZNF207O43670 478 aaKnown RBP7.88□□□□□ -1.15
LIMCH1-202ENST00000381753 RPS10P46783 165 aaKnown RBP7.88□□□□□ -1.15
LIMCH1-202ENST00000381753 PRB3Q04118 309 aaPredicted RBP7.88□□□□□ -1.15
LIMCH1-202ENST00000381753 FAM201AQ5SY85 155 aa7.88□□□□□ -1.15
LIMCH1-202ENST00000381753 MRM1Q6IN84 353 aaKnown RBP7.88□□□□□ -1.15
LIMCH1-202ENST00000381753 OR5AU1Q8NGC0 362 aa7.88□□□□□ -1.15
LIMCH1-202ENST00000381753 OR51S1Q8NGJ8 323 aa7.88□□□□□ -1.15
LIMCH1-202ENST00000381753 FCRL1Q96LA6 429 aa7.88□□□□□ -1.15
LIMCH1-202ENST00000381753 GVINP1Q7Z2Y8 2422 aa7.88□□□□□ -1.15
LIMCH1-202ENST00000381753 NEURL1O76050 574 aa7.88□□□□□ -1.15
LIMCH1-202ENST00000381753 AMTP48728 403 aa7.88□□□□□ -1.15
LIMCH1-202ENST00000381753 PDPNQ86YL7 162 aa7.88□□□□□ -1.15
LIMCH1-202ENST00000381753 SLC7A5P1Q8MH63 180 aa7.88□□□□□ -1.15
LIMCH1-202ENST00000381753 GPR27Q9NS67 375 aa7.88□□□□□ -1.15
LIMCH1-202ENST00000381753 DHRS7CA6NNS2 312 aa7.87□□□□□ -1.15
LIMCH1-202ENST00000381753 J3QR06 171 aa7.87□□□□□ -1.15
LIMCH1-202ENST00000381753 TEX38Q6PEX7 206 aa7.87□□□□□ -1.15
LIMCH1-202ENST00000381753 RNF165Q6ZSG1 346 aa7.87□□□□□ -1.15
LIMCH1-202ENST00000381753 C6orf201Q7Z4U5 140 aa7.87□□□□□ -1.15
LIMCH1-202ENST00000381753 OR13F1Q8NGS4 319 aa7.87□□□□□ -1.15
LIMCH1-202ENST00000381753 DEDD2Q8WXF8 326 aa7.87□□□□□ -1.15
LIMCH1-202ENST00000381753 C10orf35Q96D05 121 aa7.87□□□□□ -1.15
LIMCH1-202ENST00000381753 MED9Q9NWA0 146 aa7.87□□□□□ -1.15
LIMCH1-202ENST00000381753 DIMT1Q9UNQ2 313 aaKnown RBP7.87□□□□□ -1.15
LIMCH1-202ENST00000381753 ZNF318Q5VUA4 2279 aa7.87□□□□□ -1.15
LIMCH1-202ENST00000381753 TRAV30A0A087WSZ9 112 aa7.87□□□□□ -1.15
LIMCH1-202ENST00000381753 ODAMA1E959 279 aa7.87□□□□□ -1.15
LIMCH1-202ENST00000381753 C7orf72A4D263 438 aa7.87□□□□□ -1.15
LIMCH1-202ENST00000381753 OR2T8A6NH00 312 aa7.87□□□□□ -1.15
LIMCH1-202ENST00000381753 MBP02144 154 aa7.87□□□□□ -1.15
LIMCH1-202ENST00000381753 BGLAPP02818 100 aa7.87□□□□□ -1.15
LIMCH1-202ENST00000381753 S100A8P05109 93 aa7.87□□□□□ -1.15
LIMCH1-202ENST00000381753 ELK1P19419 428 aa7.87□□□□□ -1.15
LIMCH1-202ENST00000381753 PTBP1P26599 531 aaKnown RBP eCLIP7.87□□□□□ -1.15
LIMCH1-202ENST00000381753 HIST1H1AQ02539 215 aaPredicted RBP7.87□□□□□ -1.15
LIMCH1-202ENST00000381753 PNLIPRP3Q17RR3 467 aa7.87□□□□□ -1.15
LIMCH1-202ENST00000381753 MPV17LQ2QL34 196 aa7.87□□□□□ -1.15
LIMCH1-202ENST00000381753 PLAC9Q5JTB6 97 aa7.87□□□□□ -1.15
LIMCH1-202ENST00000381753 ZNF426Q9BUY5 554 aa7.87□□□□□ -1.15
LIMCH1-202ENST00000381753 TUBB1Q9H4B7 451 aa7.87□□□□□ -1.15
LIMCH1-202ENST00000381753 ADGRL4Q9HBW9 690 aa7.87□□□□□ -1.15
LIMCH1-202ENST00000381753 YTHDF2Q9Y5A9 579 aaKnown RBP7.87□□□□□ -1.15
LIMCH1-202ENST00000381753 IGHV3OR16-13A0A075B7E8 117 aa7.87□□□□□ -1.15
LIMCH1-202ENST00000381753 IGHV3-74A0A0B4J1X5 117 aa7.87□□□□□ -1.15
LIMCH1-202ENST00000381753 UBE2L5PA0A1B0GUS4 154 aa7.87□□□□□ -1.15
LIMCH1-202ENST00000381753 SOX15O60248 233 aa7.87□□□□□ -1.15
LIMCH1-202ENST00000381753 MPDU1O75352 247 aa7.87□□□□□ -1.15
LIMCH1-202ENST00000381753 ISL1P61371 349 aa7.87□□□□□ -1.15
LIMCH1-202ENST00000381753 ADIRFQ15847 76 aa7.87□□□□□ -1.15
LIMCH1-202ENST00000381753 RTN4IP1Q8WWV3 396 aaPredicted RBP7.87□□□□□ -1.15
LIMCH1-202ENST00000381753 ARPC1AQ92747 370 aa7.87□□□□□ -1.15
LIMCH1-202ENST00000381753 LAMB2P55268 1798 aa7.87□□□□□ -1.15
LIMCH1-202ENST00000381753 A0A087WV48 116 aa7.87□□□□□ -1.15
LIMCH1-202ENST00000381753 A0A0B4J2A0 478 aa7.87□□□□□ -1.15
LIMCH1-202ENST00000381753 CORTO00230 105 aa7.87□□□□□ -1.15
LIMCH1-202ENST00000381753 GREM1O60565 184 aa7.87□□□□□ -1.15
LIMCH1-202ENST00000381753 GPX1P07203 203 aa7.87□□□□□ -1.15
LIMCH1-202ENST00000381753 RFX2P48378 723 aa7.87□□□□□ -1.15
LIMCH1-202ENST00000381753 FAM3AP98173 230 aa7.87□□□□□ -1.15
LIMCH1-202ENST00000381753 MIDNQ504T8 468 aa7.87□□□□□ -1.15
LIMCH1-202ENST00000381753 FAM162BQ5T6X4 162 aa7.87□□□□□ -1.15
LIMCH1-202ENST00000381753 CLEC19AQ6UXS0 136 aa7.87□□□□□ -1.15
LIMCH1-202ENST00000381753 STAC2Q6ZMT1 411 aa7.87□□□□□ -1.15
LIMCH1-202ENST00000381753 SYS1Q8N2H4 156 aa7.87□□□□□ -1.15
LIMCH1-202ENST00000381753 OR4X1Q8NH49 305 aa7.87□□□□□ -1.15
LIMCH1-202ENST00000381753 TMEM45BQ96B21 275 aa7.87□□□□□ -1.15
LIMCH1-202ENST00000381753 SHPKQ9UHJ6 478 aa7.87□□□□□ -1.15
LIMCH1-202ENST00000381753 FBXL7Q9UJT9 491 aa7.87□□□□□ -1.15
LIMCH1-202ENST00000381753 MYO18AQ92614 2054 aaKnown RBP7.87□□□□□ -1.15
LIMCH1-202ENST00000381753 IL11P20809 199 aa7.87□□□□□ -1.15
LIMCH1-202ENST00000381753 NPBWR2P48146 333 aa7.87□□□□□ -1.15
LIMCH1-202ENST00000381753 LINC00470Q9BZP3 86 aa7.87□□□□□ -1.15
LIMCH1-202ENST00000381753 DOCK3Q8IZD9 2030 aa7.87□□□□□ -1.15
LIMCH1-202ENST00000381753 IGHV3-49A0A0A0MS15 119 aa7.86□□□□□ -1.15
LIMCH1-202ENST00000381753 PAX5Q02548 391 aa7.86□□□□□ -1.15
LIMCH1-202ENST00000381753 LCN12Q6JVE5 192 aa7.86□□□□□ -1.15
LIMCH1-202ENST00000381753 ACP7Q6ZNF0 438 aa7.86□□□□□ -1.15
LIMCH1-202ENST00000381753 FAM216BQ8N7L0 139 aa7.86□□□□□ -1.15
LIMCH1-202ENST00000381753 LEAP2Q969E1 77 aa7.86□□□□□ -1.15
LIMCH1-202ENST00000381753 ARAP2Q8WZ64 1704 aa7.86□□□□□ -1.15
LIMCH1-202ENST00000381753 RAB19A4D1S5 217 aa7.86□□□□□ -1.15
LIMCH1-202ENST00000381753 MMP16P51512 607 aa7.86□□□□□ -1.15
LIMCH1-202ENST00000381753 NCMAPQ5T1S8 102 aa7.86□□□□□ -1.15
LIMCH1-202ENST00000381753 SLC25A4P12235 298 aa7.86□□□□□ -1.15
LIMCH1-202ENST00000381753 CEACAM8P31997 349 aaPredicted RBP7.86□□□□□ -1.15
LIMCH1-202ENST00000381753 CDKN2AP42771 156 aaKnown RBP7.86□□□□□ -1.15
LIMCH1-202ENST00000381753 LHX2P50458 406 aa7.86□□□□□ -1.15
LIMCH1-202ENST00000381753 DAPP51397 102 aa7.86□□□□□ -1.15
LIMCH1-202ENST00000381753 APOC4P55056 127 aa7.86□□□□□ -1.15
LIMCH1-202ENST00000381753 SPOCK3Q9BQ16 436 aa7.86□□□□□ -1.15
LIMCH1-202ENST00000381753 AP5S1Q9NUS5 200 aa7.86□□□□□ -1.15
LIMCH1-202ENST00000381753 LINC00527Q9UJ94 153 aa7.86□□□□□ -1.15
LIMCH1-202ENST00000381753 TRGV4A0A0C4DH28 118 aa7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms