RNA–Protein interactions for RNA: ENST00000379516.6

SNX2-201, Transcript of sorting nexin 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX2, Length 2,128 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX2-201ENST00000379516 TPT1P13693 172 aaKnown RBP12.59□□□□□ -0.39
SNX2-201ENST00000379516 CD80P33681 288 aa12.59□□□□□ -0.39
SNX2-201ENST00000379516 SSTR5P35346 364 aa12.59□□□□□ -0.39
SNX2-201ENST00000379516 CA7P43166 264 aa12.59□□□□□ -0.39
SNX2-201ENST00000379516 FAM53AQ6NSI3 398 aaPredicted RBP12.59□□□□□ -0.39
SNX2-201ENST00000379516 PPP1R35Q8TAP8 253 aa12.59□□□□□ -0.39
SNX2-201ENST00000379516 STOML3Q8TAV4 291 aa12.59□□□□□ -0.39
SNX2-201ENST00000379516 NINJ1Q92982 152 aa12.59□□□□□ -0.39
SNX2-201ENST00000379516 ARL11Q969Q4 196 aa12.59□□□□□ -0.39
SNX2-201ENST00000379516 LURAP1Q96LR2 239 aa12.59□□□□□ -0.39
SNX2-201ENST00000379516 DCTN5Q9BTE1 182 aa12.59□□□□□ -0.39
SNX2-201ENST00000379516 SLC25A32Q9H2D1 315 aa12.59□□□□□ -0.39
SNX2-201ENST00000379516 NSG2Q9Y328 171 aa12.59□□□□□ -0.39
SNX2-201ENST00000379516 SERPINE2P07093 398 aa12.58□□□□□ -0.4
SNX2-201ENST00000379516 VDAC1P21796 283 aa12.58□□□□□ -0.4
SNX2-201ENST00000379516 SNTB1Q13884 538 aaKnown RBP12.58□□□□□ -0.4
SNX2-201ENST00000379516 GNMTQ14749 295 aa12.58□□□□□ -0.4
SNX2-201ENST00000379516 ZNRF1Q8ND25 227 aa12.58□□□□□ -0.4
SNX2-201ENST00000379516 RFESDQ8TAC1 157 aa12.58□□□□□ -0.4
SNX2-201ENST00000379516 IL22RA2Q969J5 263 aa12.58□□□□□ -0.4
SNX2-201ENST00000379516 SPIN2AQ99865 258 aa12.58□□□□□ -0.4
SNX2-201ENST00000379516 SPIN2BQ9BPZ2 258 aa12.58□□□□□ -0.4
SNX2-201ENST00000379516 SEBOXQ9HB31 216 aaPredicted RBP12.58□□□□□ -0.4
SNX2-201ENST00000379516 NGBQ9NPG2 151 aa12.58□□□□□ -0.4
SNX2-201ENST00000379516 CHD3Q12873 2000 aaKnown RBP12.58□□□□□ -0.4
SNX2-201ENST00000379516 CYB5R3P00387 301 aaPredicted RBP12.58□□□□□ -0.4
SNX2-201ENST00000379516 ZNF16P17020 682 aaPredicted RBP12.58□□□□□ -0.4
SNX2-201ENST00000379516 PAX5Q02548 391 aa12.58□□□□□ -0.4
SNX2-201ENST00000379516 DRAM1Q8N682 238 aa12.58□□□□□ -0.4
SNX2-201ENST00000379516 ST6GALNAC3Q8NDV1 305 aa12.58□□□□□ -0.4
SNX2-201ENST00000379516 PLEKHA2Q9HB19 425 aa12.58□□□□□ -0.4
SNX2-201ENST00000379516 OR2S2Q9NQN1 319 aa12.58□□□□□ -0.4
SNX2-201ENST00000379516 RNF150Q9ULK6 438 aa12.58□□□□□ -0.4
SNX2-201ENST00000379516 RCL1Q9Y2P8 373 aaKnown RBP12.58□□□□□ -0.4
SNX2-201ENST00000379516 POMT1Q9Y6A1 747 aa12.58□□□□□ -0.4
SNX2-201ENST00000379516 MGST3O14880 152 aa12.57□□□□□ -0.4
SNX2-201ENST00000379516 SPINT2O43291 252 aa12.57□□□□□ -0.4
SNX2-201ENST00000379516 PPP1CCP36873 323 aaKnown RBP12.57□□□□□ -0.4
SNX2-201ENST00000379516 ASCL1P50553 236 aa12.57□□□□□ -0.4
SNX2-201ENST00000379516 NMSQ5H8A3 153 aa12.57□□□□□ -0.4
SNX2-201ENST00000379516 THOC7Q6I9Y2 204 aaKnown RBP12.57□□□□□ -0.4
SNX2-201ENST00000379516 BAP18Q8IXM2 172 aa12.57□□□□□ -0.4
SNX2-201ENST00000379516 ANGPTL6Q8NI99 470 aa12.57□□□□□ -0.4
SNX2-201ENST00000379516 ESRP2Q9H6T0 727 aaKnown RBP12.57□□□□□ -0.4
SNX2-201ENST00000379516 IGHV3-43A0A0B4J1X8 118 aa12.56□□□□□ -0.4
SNX2-201ENST00000379516 ODAMA1E959 279 aa12.56□□□□□ -0.4
SNX2-201ENST00000379516 CCL21O00585 134 aa12.56□□□□□ -0.4
SNX2-201ENST00000379516 TAAR5O14804 337 aa12.56□□□□□ -0.4
SNX2-201ENST00000379516 IGHV3-43DP0DP04 118 aa12.56□□□□□ -0.4
SNX2-201ENST00000379516 NKX2-1P43699 371 aaPredicted RBP12.56□□□□□ -0.4
SNX2-201ENST00000379516 CCL8P80075 99 aa12.56□□□□□ -0.4
SNX2-201ENST00000379516 TRAT1Q6PIZ9 186 aa12.56□□□□□ -0.4
SNX2-201ENST00000379516 ERGIC1Q969X5 290 aa12.56□□□□□ -0.4
SNX2-201ENST00000379516 OR2D2Q9H210 308 aa12.56□□□□□ -0.4
SNX2-201ENST00000379516 PLEKHF2Q9H8W4 249 aa12.56□□□□□ -0.4
SNX2-201ENST00000379516 PFDN2Q9UHV9 154 aa12.56□□□□□ -0.4
SNX2-201ENST00000379516 ARID1AO14497 2285 aa12.56□□□□□ -0.4
SNX2-201ENST00000379516 FAM90A27PA6NNH2 459 aa12.56□□□□□ -0.4
SNX2-201ENST00000379516 K7N7A8 449 aa12.56□□□□□ -0.4
SNX2-201ENST00000379516 WNT2P09544 360 aa12.56□□□□□ -0.4
SNX2-201ENST00000379516 IRF2P14316 349 aa12.56□□□□□ -0.4
SNX2-201ENST00000379516 EDDM3BP56851 147 aa12.56□□□□□ -0.4
SNX2-201ENST00000379516 ZCCHC24Q8N2G6 241 aaKnown RBP12.56□□□□□ -0.4
SNX2-201ENST00000379516 ZNF645Q8N7E2 425 aa12.56□□□□□ -0.4
SNX2-201ENST00000379516 DEFB108BQ8NET1 73 aa12.56□□□□□ -0.4
SNX2-201ENST00000379516 FAM222BQ8WU58 562 aa12.56□□□□□ -0.4
SNX2-201ENST00000379516 TOLLIPQ9H0E2 274 aa12.56□□□□□ -0.4
SNX2-201ENST00000379516 LIN7CQ9NUP9 197 aaKnown RBP12.56□□□□□ -0.4
SNX2-201ENST00000379516 PIGBOS1A0A0B4J2F0 54 aa12.55□□□□□ -0.4
SNX2-201ENST00000379516 CLEC18AA5D8T8 446 aa12.55□□□□□ -0.4
SNX2-201ENST00000379516 C17orf100A8MU93 164 aa12.55□□□□□ -0.4
SNX2-201ENST00000379516 VSTM5A8MXK1 200 aa12.55□□□□□ -0.4
SNX2-201ENST00000379516 C15orf65H3BRN8 121 aa12.55□□□□□ -0.4
SNX2-201ENST00000379516 I3L521 148 aa12.55□□□□□ -0.4
SNX2-201ENST00000379516 GZMHP20718 246 aa12.55□□□□□ -0.4
SNX2-201ENST00000379516 TMEM33P57088 247 aa12.55□□□□□ -0.4
SNX2-201ENST00000379516 AANATQ16613 207 aa12.55□□□□□ -0.4
SNX2-201ENST00000379516 LTC4SQ16873 150 aa12.55□□□□□ -0.4
SNX2-201ENST00000379516 RPL7L1Q6DKI1 246 aaKnown RBP12.55□□□□□ -0.4
SNX2-201ENST00000379516 CLEC9AQ6UXN8 241 aa12.55□□□□□ -0.4
SNX2-201ENST00000379516 CLEC18CQ8NCF0 446 aa12.55□□□□□ -0.4
SNX2-201ENST00000379516 DMBX1Q8NFW5 382 aa12.55□□□□□ -0.4
SNX2-201ENST00000379516 Q8TCH9 128 aa12.55□□□□□ -0.4
SNX2-201ENST00000379516 DIRC2Q96SL1 478 aa12.55□□□□□ -0.4
SNX2-201ENST00000379516 SMIM3Q9BZL3 60 aa12.55□□□□□ -0.4
SNX2-201ENST00000379516 FBXL17Q9UF56 701 aa12.55□□□□□ -0.4
SNX2-201ENST00000379516 DEFB108AA8MXU0 73 aa12.55□□□□□ -0.4
SNX2-201ENST00000379516 TEX46H3BTG2 121 aa12.55□□□□□ -0.4
SNX2-201ENST00000379516 TNFRSF1AP19438 455 aa12.55□□□□□ -0.4
SNX2-201ENST00000379516 P2RY1P47900 373 aa12.55□□□□□ -0.4
SNX2-201ENST00000379516 POLR2GP62487 172 aaKnown RBP eCLIP12.55□□□□□ -0.4
SNX2-201ENST00000379516 CXorf66Q5JRM2 361 aaPredicted RBP12.55□□□□□ -0.4
SNX2-201ENST00000379516 TGIF2LYQ8IUE0 185 aa12.55□□□□□ -0.4
SNX2-201ENST00000379516 ZNF808Q8N4W9 903 aaPredicted RBP12.55□□□□□ -0.4
SNX2-201ENST00000379516 ZNF561Q8N587 486 aa12.55□□□□□ -0.4
SNX2-201ENST00000379516 RNASE11Q8TAA1 199 aaKnown RBP12.55□□□□□ -0.4
SNX2-201ENST00000379516 PLPPR2Q96GM1 343 aa12.55□□□□□ -0.4
SNX2-201ENST00000379516 MED9Q9NWA0 146 aa12.55□□□□□ -0.4
SNX2-201ENST00000379516 SDHAF2Q9NX18 166 aa12.55□□□□□ -0.4
SNX2-201ENST00000379516 ZZEF1O43149 2961 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms