RNA–Protein interactions for RNA: ENST00000373779.7

PTPRU-202, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 1 (best) BASIC

Gene PTPRU, Length 5,579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-202ENST00000373779 IER2Q9BTL4 223 aa15.06■□□□□ 0
PTPRU-202ENST00000373779 TM2D1Q9BX74 207 aa15.06■□□□□ 0
PTPRU-202ENST00000373779 ZNF665Q9H7R5 613 aa15.05■□□□□ 0
PTPRU-202ENST00000373779 CLN8Q9UBY8 286 aa15.05■□□□□ 0
PTPRU-202ENST00000373779 ZNF835Q9Y2P0 537 aa15.05■□□□□ 0
PTPRU-202ENST00000373779 PTPRDP23468 1912 aa15.05■□□□□ 0
PTPRU-202ENST00000373779 A0A1W2PR77 199 aa15.05■□□□□ -0
PTPRU-202ENST00000373779 MT-CO3P00414 261 aa15.05■□□□□ -0
PTPRU-202ENST00000373779 IGHV3-13P01766 116 aa15.05■□□□□ -0
PTPRU-202ENST00000373779 IGHV3-7P01780 117 aa15.05■□□□□ -0
PTPRU-202ENST00000373779 MMP7P09237 267 aaPredicted RBP15.05■□□□□ -0
PTPRU-202ENST00000373779 MDKP21741 143 aaPredicted RBP15.05■□□□□ -0
PTPRU-202ENST00000373779 DEFB109BQ30KR1 87 aa15.05■□□□□ -0
PTPRU-202ENST00000373779 CRISP2P16562 243 aa15.05■□□□□ -0
PTPRU-202ENST00000373779 SSTP61278 116 aa15.05■□□□□ -0
PTPRU-202ENST00000373779 SLC23A3Q6PIS1 610 aa15.05■□□□□ -0
PTPRU-202ENST00000373779 FGF11Q92914 225 aa15.05■□□□□ -0
PTPRU-202ENST00000373779 MEGF10Q96KG7 1140 aa15.05■□□□□ -0
PTPRU-202ENST00000373779 GINS3Q9BRX5 216 aa15.05■□□□□ -0
PTPRU-202ENST00000373779 LOC390937A0A1W2PQ73 354 aa15.05■□□□□ -0
PTPRU-202ENST00000373779 ZNF83P51522 516 aa15.05■□□□□ -0
PTPRU-202ENST00000373779 HES1Q14469 280 aa15.05■□□□□ -0
PTPRU-202ENST00000373779 WDR73Q6P4I2 378 aa15.05■□□□□ -0
PTPRU-202ENST00000373779 WFDC8Q8IUA0 241 aa15.05■□□□□ -0
PTPRU-202ENST00000373779 SCN5AQ14524 2016 aa15.04■□□□□ -0
PTPRU-202ENST00000373779 TGIF2-C20orf24A0A0A6YYL0 155 aa15.04■□□□□ -0
PTPRU-202ENST00000373779 GPHA2Q96T91 129 aa15.04■□□□□ -0
PTPRU-202ENST00000373779 RNF126Q9BV68 326 aa15.04■□□□□ -0
PTPRU-202ENST00000373779 HSD17B10Q99714 261 aaKnown RBP15.04■□□□□ -0
PTPRU-202ENST00000373779 M0R143 59 aa15.04■□□□□ -0
PTPRU-202ENST00000373779 RAMP1O60894 148 aa15.04■□□□□ -0
PTPRU-202ENST00000373779 GPR146Q96CH1 333 aa15.04■□□□□ -0
PTPRU-202ENST00000373779 HIF1ANQ9NWT6 349 aa15.04■□□□□ -0
PTPRU-202ENST00000373779 DOCK6Q96HP0 2047 aa15.04■□□□□ -0
PTPRU-202ENST00000373779 TRAV17A0A0B4J275 112 aa15.04■□□□□ -0
PTPRU-202ENST00000373779 FAM3BP58499 235 aaPredicted RBP15.04■□□□□ -0
PTPRU-202ENST00000373779 TMEM56Q96MV1 263 aa15.04■□□□□ -0
PTPRU-202ENST00000373779 OR6C3Q9NZP0 311 aa15.04■□□□□ -0
PTPRU-202ENST00000373779 METTL1Q9UBP6 276 aaKnown RBP15.04■□□□□ -0
PTPRU-202ENST00000373779 CXorf65A6NEN9 183 aa15.03■□□□□ -0
PTPRU-202ENST00000373779 MPLP40238 635 aa15.03■□□□□ -0
PTPRU-202ENST00000373779 FKBP11Q9NYL4 201 aa15.03■□□□□ -0
PTPRU-202ENST00000373779 MDP1Q86V88 176 aa15.03■□□□□ -0
PTPRU-202ENST00000373779 POM121Q96HA1 1249 aa15.03■□□□□ -0
PTPRU-202ENST00000373779 SRXN1Q9BYN0 137 aa15.03■□□□□ -0
PTPRU-202ENST00000373779 HES4Q9HCC6 221 aa15.03■□□□□ -0
PTPRU-202ENST00000373779 SLC25A40Q8TBP6 338 aa15.03■□□□□ -0
PTPRU-202ENST00000373779 SMOC1Q9H4F8 434 aa15.03■□□□□ -0
PTPRU-202ENST00000373779 GLRX2Q9NS18 164 aa15.03■□□□□ -0
PTPRU-202ENST00000373779 CSN1S1P47710 185 aa15.03■□□□□ -0
PTPRU-202ENST00000373779 STUMQ69YW2 141 aa15.03■□□□□ -0
PTPRU-202ENST00000373779 TP53RKQ96S44 253 aa15.03■□□□□ -0
PTPRU-202ENST00000373779 TMEM167BQ9NRX6 74 aa15.03■□□□□ -0
PTPRU-202ENST00000373779 TMEM210A6NLX4 147 aa15.03■□□□□ -0
PTPRU-202ENST00000373779 DHRS13Q6UX07 377 aa15.03■□□□□ -0
PTPRU-202ENST00000373779 SSMEM1Q8WWF3 244 aa15.03■□□□□ -0
PTPRU-202ENST00000373779 NOL4LQ96MY1 436 aaPredicted RBP15.03■□□□□ -0
PTPRU-202ENST00000373779 MPZP25189 248 aa15.02■□□□□ -0
PTPRU-202ENST00000373779 ZNF818PQ6ZRF7 136 aa15.02■□□□□ -0
PTPRU-202ENST00000373779 MARS2Q96GW9 593 aaKnown RBP15.02■□□□□ -0
PTPRU-202ENST00000373779 F8VVB4 439 aa15.02■□□□□ -0
PTPRU-202ENST00000373779 F8VWA3 439 aa15.02■□□□□ -0
PTPRU-202ENST00000373779 ACSM6Q6P461 480 aa15.02■□□□□ -0
PTPRU-202ENST00000373779 BIVMQ86UB2 503 aa15.02■□□□□ -0
PTPRU-202ENST00000373779 REG4Q9BYZ8 158 aa15.02■□□□□ -0
PTPRU-202ENST00000373779 FBLN5Q9UBX5 448 aa15.02■□□□□ -0
PTPRU-202ENST00000373779 PRRG2O14669 202 aa15.02□□□□□ -0.01
PTPRU-202ENST00000373779 ZNHIT1O43257 154 aa15.02□□□□□ -0.01
PTPRU-202ENST00000373779 SYNGR1O43759 233 aa15.02□□□□□ -0.01
PTPRU-202ENST00000373779 AESQ08117 197 aa15.02□□□□□ -0.01
PTPRU-202ENST00000373779 FBXW9Q5XUX1 488 aa15.02□□□□□ -0.01
PTPRU-202ENST00000373779 P2RX4Q99571 388 aa15.02□□□□□ -0.01
PTPRU-202ENST00000373779 ZNF355PQ9NSJ1 428 aa15.02□□□□□ -0.01
PTPRU-202ENST00000373779 R4GN57 208 aa15.02□□□□□ -0.01
PTPRU-202ENST00000373779 FGF5P12034 268 aa15.02□□□□□ -0.01
PTPRU-202ENST00000373779 OPRK1P41145 380 aa15.02□□□□□ -0.01
PTPRU-202ENST00000373779 CDX1P47902 265 aaPredicted RBP15.02□□□□□ -0.01
PTPRU-202ENST00000373779 MEF2BQ02080 365 aaPredicted RBP15.02□□□□□ -0.01
PTPRU-202ENST00000373779 TGIF1Q15583 401 aa15.02□□□□□ -0.01
PTPRU-202ENST00000373779 VMA21Q3ZAQ7 101 aa15.02□□□□□ -0.01
PTPRU-202ENST00000373779 LILRB1Q8NHL6 650 aaPredicted RBP15.02□□□□□ -0.01
PTPRU-202ENST00000373779 RTN4RQ9BZR6 473 aa15.02□□□□□ -0.01
PTPRU-202ENST00000373779 WNT5BQ9H1J7 359 aa15.02□□□□□ -0.01
PTPRU-202ENST00000373779 CISD1Q9NZ45 108 aaKnown RBP15.02□□□□□ -0.01
PTPRU-202ENST00000373779 RIPPLY2Q5TAB7 128 aa15.01□□□□□ -0.01
PTPRU-202ENST00000373779 SSX7Q7RTT5 188 aa15.01□□□□□ -0.01
PTPRU-202ENST00000373779 ADTRPQ96IZ2 230 aa15.01□□□□□ -0.01
PTPRU-202ENST00000373779 SPSB2Q99619 263 aa15.01□□□□□ -0.01
PTPRU-202ENST00000373779 C3orf80F5H4A9 247 aa15.01□□□□□ -0.01
PTPRU-202ENST00000373779 KCNMB1Q16558 191 aa15.01□□□□□ -0.01
PTPRU-202ENST00000373779 OR4P4Q8NGL7 312 aa15.01□□□□□ -0.01
PTPRU-202ENST00000373779 AURKAIP1Q9NWT8 199 aaPredicted RBP15.01□□□□□ -0.01
PTPRU-202ENST00000373779 FGF16O43320 207 aa15.01□□□□□ -0.01
PTPRU-202ENST00000373779 TNFRSF1AP19438 455 aa15.01□□□□□ -0.01
PTPRU-202ENST00000373779 GZMHP20718 246 aa15.01□□□□□ -0.01
PTPRU-202ENST00000373779 NPBWR2P48146 333 aa15.01□□□□□ -0.01
PTPRU-202ENST00000373779 MNX1P50219 401 aaPredicted RBP15.01□□□□□ -0.01
PTPRU-202ENST00000373779 SRSF3P84103 164 aaKnown RBP15.01□□□□□ -0.01
PTPRU-202ENST00000373779 RNASEKQ6P5S7 137 aaKnown RBP15.01□□□□□ -0.01
PTPRU-202ENST00000373779 SAXO1Q8IYX7 474 aa15.01□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms