RNA–Protein interactions for RNA: ENST00000560777.5

RABGGTA-218, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5 BASIC

Gene RABGGTA, Length 1,197 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-218ENST00000560777 SLC25A38Q96DW6 304 aa9.69□□□□□ -0.86
RABGGTA-218ENST00000560777 DUX5Q96PT3 197 aa9.69□□□□□ -0.86
RABGGTA-218ENST00000560777 MEGF9Q9H1U4 602 aa9.69□□□□□ -0.86
RABGGTA-218ENST00000560777 RIMS4Q9H426 269 aaPredicted RBP9.69□□□□□ -0.86
RABGGTA-218ENST00000560777 ZMAT3Q9HA38 289 aaKnown RBP9.69□□□□□ -0.86
RABGGTA-218ENST00000560777 TAF9BQ9HBM6 251 aa9.69□□□□□ -0.86
RABGGTA-218ENST00000560777 SCOCQ9UIL1 159 aa9.69□□□□□ -0.86
RABGGTA-218ENST00000560777 SPATA2Q9UM82 520 aa9.69□□□□□ -0.86
RABGGTA-218ENST00000560777 TBL2Q9Y4P3 447 aaKnown RBP9.69□□□□□ -0.86
RABGGTA-218ENST00000560777 ETV7Q9Y603 341 aa9.69□□□□□ -0.86
RABGGTA-218ENST00000560777 DNAJC9-AS1A6NH13 148 aa9.68□□□□□ -0.86
RABGGTA-218ENST00000560777 MFNGO00587 321 aa9.68□□□□□ -0.86
RABGGTA-218ENST00000560777 TOR1AO14656 332 aa9.68□□□□□ -0.86
RABGGTA-218ENST00000560777 SPINT2O43291 252 aa9.68□□□□□ -0.86
RABGGTA-218ENST00000560777 HBZP02008 142 aa9.68□□□□□ -0.86
RABGGTA-218ENST00000560777 HIST1H1DP16402 221 aaKnown RBP9.68□□□□□ -0.86
RABGGTA-218ENST00000560777 PRRX1P54821 245 aa9.68□□□□□ -0.86
RABGGTA-218ENST00000560777 CDNFQ49AH0 187 aa9.68□□□□□ -0.86
RABGGTA-218ENST00000560777 TRAT1Q6PIZ9 186 aa9.68□□□□□ -0.86
RABGGTA-218ENST00000560777 ZNF554Q86TJ5 538 aa9.68□□□□□ -0.86
RABGGTA-218ENST00000560777 LDLRAD3Q86YD5 345 aa9.68□□□□□ -0.86
RABGGTA-218ENST00000560777 DYNAPQ8N1N2 210 aa9.68□□□□□ -0.86
RABGGTA-218ENST00000560777 PRR18Q8N4B5 295 aa9.68□□□□□ -0.86
RABGGTA-218ENST00000560777 BEND2Q8NDZ0 799 aa9.68□□□□□ -0.86
RABGGTA-218ENST00000560777 OR52M1Q8NGK5 317 aa9.68□□□□□ -0.86
RABGGTA-218ENST00000560777 OR4P4Q8NGL7 312 aa9.68□□□□□ -0.86
RABGGTA-218ENST00000560777 NDNFQ8TB73 568 aa9.68□□□□□ -0.86
RABGGTA-218ENST00000560777 MALSU1Q96EH3 234 aa9.68□□□□□ -0.86
RABGGTA-218ENST00000560777 CMSS1Q9BQ75 279 aaKnown RBP9.68□□□□□ -0.86
RABGGTA-218ENST00000560777 DCSTAMPQ9H295 470 aa9.68□□□□□ -0.86
RABGGTA-218ENST00000560777 CHMP1AQ9HD42 196 aaPredicted RBP9.68□□□□□ -0.86
RABGGTA-218ENST00000560777 RHBDL2Q9NX52 303 aa9.68□□□□□ -0.86
RABGGTA-218ENST00000560777 KCNIP1Q9NZI2 227 aa9.68□□□□□ -0.86
RABGGTA-218ENST00000560777 ZNRD1Q9P1U0 126 aa9.68□□□□□ -0.86
RABGGTA-218ENST00000560777 ELF5Q9UKW6 265 aaPredicted RBP9.68□□□□□ -0.86
RABGGTA-218ENST00000560777 PSG11Q9UQ72 335 aa9.68□□□□□ -0.86
RABGGTA-218ENST00000560777 A0A075B6Q4 140 aa9.67□□□□□ -0.86
RABGGTA-218ENST00000560777 IGHV3-43A0A0B4J1X8 118 aa9.67□□□□□ -0.86
RABGGTA-218ENST00000560777 POM121CA8CG34 1229 aa9.67□□□□□ -0.86
RABGGTA-218ENST00000560777 SERPINE3A8MV23 424 aa9.67□□□□□ -0.86
RABGGTA-218ENST00000560777 BUB1B-PAK6H3BSN5 160 aa9.67□□□□□ -0.86
RABGGTA-218ENST00000560777 CLDN34H7C241 214 aa9.67□□□□□ -0.86
RABGGTA-218ENST00000560777 TRIM77I1YAP6 450 aa9.67□□□□□ -0.86
RABGGTA-218ENST00000560777 J3QR06 171 aa9.67□□□□□ -0.86
RABGGTA-218ENST00000560777 SDCBPO00560 298 aaPredicted RBP9.67□□□□□ -0.86
RABGGTA-218ENST00000560777 IGHV4-59P01825 116 aa9.67□□□□□ -0.86
RABGGTA-218ENST00000560777 IGHV3-43DP0DP04 118 aa9.67□□□□□ -0.86
RABGGTA-218ENST00000560777 HTR1DP28221 377 aa9.67□□□□□ -0.86
RABGGTA-218ENST00000560777 RORCP51449 518 aa9.67□□□□□ -0.86
RABGGTA-218ENST00000560777 TMBIM6P55061 237 aa9.67□□□□□ -0.86
RABGGTA-218ENST00000560777 UBA52P62987 128 aaKnown RBP9.67□□□□□ -0.86
RABGGTA-218ENST00000560777 SPCS2Q15005 226 aa9.67□□□□□ -0.86
RABGGTA-218ENST00000560777 HMGN3Q15651 99 aa9.67□□□□□ -0.86
RABGGTA-218ENST00000560777 SSX2Q16385 188 aa9.67□□□□□ -0.86
RABGGTA-218ENST00000560777 HLA-DRB5Q30154 266 aa9.67□□□□□ -0.86
RABGGTA-218ENST00000560777 KRTAP24-1Q3LI83 254 aa9.67□□□□□ -0.86
RABGGTA-218ENST00000560777 MINOS1Q5TGZ0 78 aa9.67□□□□□ -0.86
RABGGTA-218ENST00000560777 OR9G1Q8NH87 305 aa9.67□□□□□ -0.86
RABGGTA-218ENST00000560777 ZNF596Q8TC21 504 aa9.67□□□□□ -0.86
RABGGTA-218ENST00000560777 SSMEM1Q8WWF3 244 aa9.67□□□□□ -0.86
RABGGTA-218ENST00000560777 KCTD12Q96CX2 325 aaKnown RBP9.67□□□□□ -0.86
RABGGTA-218ENST00000560777 ABCG5Q9H222 651 aa9.67□□□□□ -0.86
RABGGTA-218ENST00000560777 Q9N2K0 584 aa9.67□□□□□ -0.86
RABGGTA-218ENST00000560777 RAB9BQ9NP90 201 aa9.67□□□□□ -0.86
RABGGTA-218ENST00000560777 C12orf4Q9NQ89 552 aa9.67□□□□□ -0.86
RABGGTA-218ENST00000560777 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP9.67□□□□□ -0.86
RABGGTA-218ENST00000560777 GFOD1Q9NXC2 390 aa9.67□□□□□ -0.86
RABGGTA-218ENST00000560777 MINOS1-NBL1R4GNA1 71 aa9.67□□□□□ -0.86
RABGGTA-218ENST00000560777 A0A1W2PPE3 182 aa9.66□□□□□ -0.86
RABGGTA-218ENST00000560777 LY6LH3BQJ8 138 aa9.66□□□□□ -0.86
RABGGTA-218ENST00000560777 SCGNO76038 276 aa9.66□□□□□ -0.86
RABGGTA-218ENST00000560777 CD3GP09693 182 aa9.66□□□□□ -0.86
RABGGTA-218ENST00000560777 ZNF134P52741 427 aa9.66□□□□□ -0.86
RABGGTA-218ENST00000560777 HTD2P86397 168 aa9.66□□□□□ -0.86
RABGGTA-218ENST00000560777 ARL6IP1Q15041 203 aa9.66□□□□□ -0.86
RABGGTA-218ENST00000560777 ZNF260Q3ZCT1 412 aa9.66□□□□□ -0.86
RABGGTA-218ENST00000560777 TMEM86BQ8N661 226 aa9.66□□□□□ -0.86
RABGGTA-218ENST00000560777 OR52L2PQ8NGH6 319 aa9.66□□□□□ -0.86
RABGGTA-218ENST00000560777 SETD6Q8TBK2 473 aa9.66□□□□□ -0.86
RABGGTA-218ENST00000560777 PIFOQ8TCI5 191 aa9.66□□□□□ -0.86
RABGGTA-218ENST00000560777 FAM216AQ8WUB2 273 aa9.66□□□□□ -0.86
RABGGTA-218ENST00000560777 RAB2BQ8WUD1 216 aa9.66□□□□□ -0.86
RABGGTA-218ENST00000560777 ZFAND2BQ8WV99 257 aa9.66□□□□□ -0.86
RABGGTA-218ENST00000560777 GALMQ96C23 342 aa9.66□□□□□ -0.86
RABGGTA-218ENST00000560777 MDFIQ99750 246 aa9.66□□□□□ -0.86
RABGGTA-218ENST00000560777 SSX3Q99909 188 aa9.66□□□□□ -0.86
RABGGTA-218ENST00000560777 MMP28Q9H239 520 aa9.66□□□□□ -0.86
RABGGTA-218ENST00000560777 OR2S2Q9NQN1 319 aa9.66□□□□□ -0.86
RABGGTA-218ENST00000560777 TNFRSF19Q9NS68 423 aa9.66□□□□□ -0.86
RABGGTA-218ENST00000560777 DPM3Q9P2X0 92 aa9.66□□□□□ -0.86
RABGGTA-218ENST00000560777 HILPDAQ9Y5L2 63 aa9.66□□□□□ -0.86
RABGGTA-218ENST00000560777 POMT1Q9Y6A1 747 aa9.66□□□□□ -0.86
RABGGTA-218ENST00000560777 CEPT1Q9Y6K0 416 aa9.66□□□□□ -0.86
RABGGTA-218ENST00000560777 VGLL3A8MV65 326 aa9.65□□□□□ -0.86
RABGGTA-218ENST00000560777 LEUTXA8MZ59 168 aa9.65□□□□□ -0.86
RABGGTA-218ENST00000560777 RNASE1P07998 156 aaKnown RBP9.65□□□□□ -0.86
RABGGTA-218ENST00000560777 SCTP09683 121 aa9.65□□□□□ -0.86
RABGGTA-218ENST00000560777 GNG10P50151 68 aa9.65□□□□□ -0.86
RABGGTA-218ENST00000560777 RAB13P51153 203 aa9.65□□□□□ -0.86
RABGGTA-218ENST00000560777 ARFRP1Q13795 201 aa9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms