RNA–Protein interactions for RNA: ENST00000540763.5

DDX55-207, Transcript of DEAD-box helicase 55, humanhuman

TSL 3

Gene DDX55, Length 799 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-207ENST00000540763 MEIOCA2RUB1 952 aa15.8■□□□□ 0.12
DDX55-207ENST00000540763 C12orf77C9JDV5 145 aa15.8■□□□□ 0.12
DDX55-207ENST00000540763 ARG1P05089 322 aa15.8■□□□□ 0.12
DDX55-207ENST00000540763 RCC1P18754 421 aaPredicted RBP15.8■□□□□ 0.12
DDX55-207ENST00000540763 LGALS4P56470 323 aa15.8■□□□□ 0.12
DDX55-207ENST00000540763 HMGN3Q15651 99 aa15.8■□□□□ 0.12
DDX55-207ENST00000540763 ABHD12Q8N2K0 398 aa15.8■□□□□ 0.12
DDX55-207ENST00000540763 BEND2Q8NDZ0 799 aa15.8■□□□□ 0.12
DDX55-207ENST00000540763 AP3S1Q92572 193 aa15.8■□□□□ 0.12
DDX55-207ENST00000540763 CYYR1Q96J86 154 aa15.8■□□□□ 0.12
DDX55-207ENST00000540763 CMTM3Q96MX0 182 aa15.8■□□□□ 0.12
DDX55-207ENST00000540763 CMSS1Q9BQ75 279 aaKnown RBP15.8■□□□□ 0.12
DDX55-207ENST00000540763 ABCG5Q9H222 651 aa15.8■□□□□ 0.12
DDX55-207ENST00000540763 CHMP1AQ9HD42 196 aaPredicted RBP15.8■□□□□ 0.12
DDX55-207ENST00000540763 FAM96BQ9Y3D0 163 aa15.8■□□□□ 0.12
DDX55-207ENST00000540763 CLDN34H7C241 214 aa15.79■□□□□ 0.12
DDX55-207ENST00000540763 IGLV1-47P01700 117 aa15.79■□□□□ 0.12
DDX55-207ENST00000540763 GSTP1P09211 210 aaKnown RBP15.79■□□□□ 0.12
DDX55-207ENST00000540763 CD3GP09693 182 aa15.79■□□□□ 0.12
DDX55-207ENST00000540763 MRPS15P82914 257 aaKnown RBP15.79■□□□□ 0.12
DDX55-207ENST00000540763 UBE2NLQ5JXB2 153 aa15.79■□□□□ 0.12
DDX55-207ENST00000540763 Q6YL49 198 aa15.79■□□□□ 0.12
DDX55-207ENST00000540763 TMEM86BQ8N661 226 aa15.79■□□□□ 0.12
DDX55-207ENST00000540763 C8orf31Q8N9H6 132 aa15.79■□□□□ 0.12
DDX55-207ENST00000540763 OR9G1Q8NH87 305 aa15.79■□□□□ 0.12
DDX55-207ENST00000540763 NDNFQ8TB73 568 aa15.79■□□□□ 0.12
DDX55-207ENST00000540763 CREB3L1Q96BA8 519 aa15.79■□□□□ 0.12
DDX55-207ENST00000540763 PHF21AQ96BD5 680 aa15.79■□□□□ 0.12
DDX55-207ENST00000540763 TAF9BQ9HBM6 251 aa15.79■□□□□ 0.12
DDX55-207ENST00000540763 ZNF286AQ9HBT8 521 aa15.79■□□□□ 0.12
DDX55-207ENST00000540763 ZNRD1Q9P1U0 126 aa15.79■□□□□ 0.12
DDX55-207ENST00000540763 A0A1W2PRD5 423 aa15.78■□□□□ 0.12
DDX55-207ENST00000540763 A0A1W2PRF3 423 aa15.78■□□□□ 0.12
DDX55-207ENST00000540763 A0A1W2PRM7 423 aa15.78■□□□□ 0.12
DDX55-207ENST00000540763 HBZP02008 142 aa15.78■□□□□ 0.12
DDX55-207ENST00000540763 NFYBP25208 207 aa15.78■□□□□ 0.12
DDX55-207ENST00000540763 PRRX1P54821 245 aa15.78■□□□□ 0.12
DDX55-207ENST00000540763 LOXL3P58215 753 aa15.78■□□□□ 0.12
DDX55-207ENST00000540763 HTD2P86397 168 aa15.78■□□□□ 0.12
DDX55-207ENST00000540763 AANATQ16613 207 aa15.78■□□□□ 0.12
DDX55-207ENST00000540763 RFESDQ8TAC1 157 aa15.78■□□□□ 0.12
DDX55-207ENST00000540763 ZFAND2BQ8WV99 257 aa15.78■□□□□ 0.12
DDX55-207ENST00000540763 ZDHHC16Q969W1 377 aa15.78■□□□□ 0.12
DDX55-207ENST00000540763 ISOC1Q96CN7 298 aa15.78■□□□□ 0.12
DDX55-207ENST00000540763 AJUBAQ96IF1 538 aa15.78■□□□□ 0.12
DDX55-207ENST00000540763 MEGF9Q9H1U4 602 aa15.78■□□□□ 0.12
DDX55-207ENST00000540763 GFOD1Q9NXC2 390 aa15.78■□□□□ 0.12
DDX55-207ENST00000540763 SOX21Q9Y651 276 aaPredicted RBP15.78■□□□□ 0.12
DDX55-207ENST00000540763 POMT1Q9Y6A1 747 aa15.78■□□□□ 0.12
DDX55-207ENST00000540763 SDCBPO00560 298 aaPredicted RBP15.77■□□□□ 0.12
DDX55-207ENST00000540763 GNB3P16520 340 aa15.77■□□□□ 0.12
DDX55-207ENST00000540763 ZNF182P17025 639 aaPredicted RBP15.77■□□□□ 0.12
DDX55-207ENST00000540763 PITPNAQ00169 270 aa15.77■□□□□ 0.12
DDX55-207ENST00000540763 SRSF7Q16629 238 aaKnown RBP eCLIP15.77■□□□□ 0.12
DDX55-207ENST00000540763 PNLIPRP3Q17RR3 467 aa15.77■□□□□ 0.12
DDX55-207ENST00000540763 HLA-DRB5Q30154 266 aa15.77■□□□□ 0.12
DDX55-207ENST00000540763 OLFML2AQ68BL7 652 aa15.77■□□□□ 0.12
DDX55-207ENST00000540763 BAIAP2L2Q6UXY1 529 aa15.77■□□□□ 0.12
DDX55-207ENST00000540763 Q6ZPA2 131 aa15.77■□□□□ 0.12
DDX55-207ENST00000540763 OR4P4Q8NGL7 312 aa15.77■□□□□ 0.12
DDX55-207ENST00000540763 SSMEM1Q8WWF3 244 aa15.77■□□□□ 0.12
DDX55-207ENST00000540763 GALMQ96C23 342 aa15.77■□□□□ 0.12
DDX55-207ENST00000540763 MALSU1Q96EH3 234 aa15.77■□□□□ 0.12
DDX55-207ENST00000540763 HDHD3Q9BSH5 251 aaPredicted RBP15.77■□□□□ 0.12
DDX55-207ENST00000540763 Q9N2K0 584 aa15.77■□□□□ 0.12
DDX55-207ENST00000540763 DIABLOQ9NR28 239 aa15.77■□□□□ 0.12
DDX55-207ENST00000540763 JPT1Q9UK76 154 aa15.77■□□□□ 0.12
DDX55-207ENST00000540763 MDFIC2A0A1B0GVS7 189 aa15.76■□□□□ 0.11
DDX55-207ENST00000540763 TOR1AO14656 332 aa15.76■□□□□ 0.11
DDX55-207ENST00000540763 VENTXO95231 258 aa15.76■□□□□ 0.11
DDX55-207ENST00000540763 MELTFP08582 738 aa15.76■□□□□ 0.11
DDX55-207ENST00000540763 DTYMKP23919 212 aa15.76■□□□□ 0.11
DDX55-207ENST00000540763 HTR1DP28221 377 aa15.76■□□□□ 0.11
DDX55-207ENST00000540763 SOX6P35712 828 aa15.76■□□□□ 0.11
DDX55-207ENST00000540763 HLA-DRB3P79483 266 aa15.76■□□□□ 0.11
DDX55-207ENST00000540763 BAMBIQ13145 260 aa15.76■□□□□ 0.11
DDX55-207ENST00000540763 SPCS2Q15005 226 aa15.76■□□□□ 0.11
DDX55-207ENST00000540763 ZNF260Q3ZCT1 412 aa15.76■□□□□ 0.11
DDX55-207ENST00000540763 CDNFQ49AH0 187 aa15.76■□□□□ 0.11
DDX55-207ENST00000540763 LY6G6FQ5SQ64 297 aa15.76■□□□□ 0.11
DDX55-207ENST00000540763 HACD4Q5VWC8 232 aa15.76■□□□□ 0.11
DDX55-207ENST00000540763 MZT2AQ6P582 158 aa15.76■□□□□ 0.11
DDX55-207ENST00000540763 LINC00311Q8N616 119 aa15.76■□□□□ 0.11
DDX55-207ENST00000540763 SAMD12Q8N8I0 201 aa15.76■□□□□ 0.11
DDX55-207ENST00000540763 ZDHHC22Q8N966 263 aa15.76■□□□□ 0.11
DDX55-207ENST00000540763 TMEM158Q8WZ71 300 aa15.76■□□□□ 0.11
DDX55-207ENST00000540763 MMP28Q9H239 520 aa15.76■□□□□ 0.11
DDX55-207ENST00000540763 ESM1Q9NQ30 184 aa15.76■□□□□ 0.11
DDX55-207ENST00000540763 AMMECR1Q9Y4X0 333 aaPredicted RBP15.76■□□□□ 0.11
DDX55-207ENST00000540763 CEPT1Q9Y6K0 416 aa15.76■□□□□ 0.11
DDX55-207ENST00000540763 DNAJC9-AS1A6NH13 148 aa15.75■□□□□ 0.11
DDX55-207ENST00000540763 H3BMQ9 156 aa15.75■□□□□ 0.11
DDX55-207ENST00000540763 TRIM77I1YAP6 450 aa15.75■□□□□ 0.11
DDX55-207ENST00000540763 J3QR06 171 aa15.75■□□□□ 0.11
DDX55-207ENST00000540763 ZNF701M0R085 212 aaPredicted RBP15.75■□□□□ 0.11
DDX55-207ENST00000540763 DIRAS3O95661 229 aa15.75■□□□□ 0.11
DDX55-207ENST00000540763 APOA1P02647 267 aa15.75■□□□□ 0.11
DDX55-207ENST00000540763 FCGR3AP08637 254 aa15.75■□□□□ 0.11
DDX55-207ENST00000540763 CEACAM3P40198 252 aa15.75■□□□□ 0.11
DDX55-207ENST00000540763 ARFRP1Q13795 201 aa15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 80 ms