RNA–Protein interactions for RNA: ENST00000535399.1

SFSWAP-204, Transcript of splicing factor SWAP, humanhuman

TSL 2

Gene SFSWAP, Length 778 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-204ENST00000535399 AIREO43918 545 aa18.36■□□□□ 0.53
SFSWAP-204ENST00000535399 GPR137BO60478 399 aa18.36■□□□□ 0.53
SFSWAP-204ENST00000535399 IGHV3-7P01780 117 aa18.36■□□□□ 0.53
SFSWAP-204ENST00000535399 PRRX1P54821 245 aa18.36■□□□□ 0.53
SFSWAP-204ENST00000535399 MXD1Q05195 221 aa18.36■□□□□ 0.53
SFSWAP-204ENST00000535399 HLA-DRB5Q30154 266 aa18.36■□□□□ 0.53
SFSWAP-204ENST00000535399 SLC16A12Q6ZSM3 486 aa18.36■□□□□ 0.53
SFSWAP-204ENST00000535399 OR56B1Q8NGI3 324 aa18.36■□□□□ 0.53
SFSWAP-204ENST00000535399 OR52M1Q8NGK5 317 aa18.36■□□□□ 0.53
SFSWAP-204ENST00000535399 ARHGAP5-AS1Q96IT6 56 aa18.36■□□□□ 0.53
SFSWAP-204ENST00000535399 DAPK2Q9UIK4 370 aa18.36■□□□□ 0.53
SFSWAP-204ENST00000535399 PSG11Q9UQ72 335 aa18.36■□□□□ 0.53
SFSWAP-204ENST00000535399 HILPDAQ9Y5L2 63 aa18.36■□□□□ 0.53
SFSWAP-204ENST00000535399 J3QR06 171 aa18.35■□□□□ 0.53
SFSWAP-204ENST00000535399 TOR1AO14656 332 aa18.35■□□□□ 0.53
SFSWAP-204ENST00000535399 NAPSAO96009 420 aa18.35■□□□□ 0.53
SFSWAP-204ENST00000535399 HBZP02008 142 aa18.35■□□□□ 0.53
SFSWAP-204ENST00000535399 TGFBR1P36897 503 aa18.35■□□□□ 0.53
SFSWAP-204ENST00000535399 COMPP49747 757 aaPredicted RBP18.35■□□□□ 0.53
SFSWAP-204ENST00000535399 LOXL3P58215 753 aa18.35■□□□□ 0.53
SFSWAP-204ENST00000535399 FAM189A2Q15884 450 aa18.35■□□□□ 0.53
SFSWAP-204ENST00000535399 MOGAT2Q3SYC2 334 aa18.35■□□□□ 0.53
SFSWAP-204ENST00000535399 PLA1AQ53H76 456 aa18.35■□□□□ 0.53
SFSWAP-204ENST00000535399 PLAC9Q5JTB6 97 aa18.35■□□□□ 0.53
SFSWAP-204ENST00000535399 FAM53AQ6NSI3 398 aaPredicted RBP18.35■□□□□ 0.53
SFSWAP-204ENST00000535399 TRAT1Q6PIZ9 186 aa18.35■□□□□ 0.53
SFSWAP-204ENST00000535399 Q6ZPA2 131 aa18.35■□□□□ 0.53
SFSWAP-204ENST00000535399 ZNF554Q86TJ5 538 aa18.35■□□□□ 0.53
SFSWAP-204ENST00000535399 OR13F1Q8NGS4 319 aa18.35■□□□□ 0.53
SFSWAP-204ENST00000535399 OR1L1Q8NH94 360 aa18.35■□□□□ 0.53
SFSWAP-204ENST00000535399 PTX4Q96A99 478 aa18.35■□□□□ 0.53
SFSWAP-204ENST00000535399 PECRQ9BY49 303 aa18.35■□□□□ 0.53
SFSWAP-204ENST00000535399 TAF9BQ9HBM6 251 aa18.35■□□□□ 0.53
SFSWAP-204ENST00000535399 GFOD1Q9NXC2 390 aa18.35■□□□□ 0.53
SFSWAP-204ENST00000535399 AK3Q9UIJ7 227 aa18.35■□□□□ 0.53
SFSWAP-204ENST00000535399 LY6LH3BQJ8 138 aa18.34■□□□□ 0.53
SFSWAP-204ENST00000535399 BUB1B-PAK6H3BSN5 160 aa18.34■□□□□ 0.53
SFSWAP-204ENST00000535399 SDCBPO00560 298 aaPredicted RBP18.34■□□□□ 0.53
SFSWAP-204ENST00000535399 SPINT2O43291 252 aa18.34■□□□□ 0.53
SFSWAP-204ENST00000535399 ZNF880Q6PDB4 577 aa18.34■□□□□ 0.53
SFSWAP-204ENST00000535399 Q6ZTK2 550 aa18.34■□□□□ 0.53
SFSWAP-204ENST00000535399 C5orf24Q7Z6I8 188 aa18.34■□□□□ 0.53
SFSWAP-204ENST00000535399 HDHD3Q9BSH5 251 aaPredicted RBP18.34■□□□□ 0.53
SFSWAP-204ENST00000535399 MMP28Q9H239 520 aa18.34■□□□□ 0.53
SFSWAP-204ENST00000535399 C1RLQ9NZP8 487 aa18.34■□□□□ 0.53
SFSWAP-204ENST00000535399 TRBV6-6A0A0A6YYG2 114 aa18.33■□□□□ 0.52
SFSWAP-204ENST00000535399 LEUTXA8MZ59 168 aa18.33■□□□□ 0.52
SFSWAP-204ENST00000535399 RAB27BO00194 218 aa18.33■□□□□ 0.52
SFSWAP-204ENST00000535399 SNRPBP14678 240 aaKnown RBP18.33■□□□□ 0.52
SFSWAP-204ENST00000535399 GNG10P50151 68 aa18.33■□□□□ 0.52
SFSWAP-204ENST00000535399 RPL15P61313 204 aaKnown RBP18.33■□□□□ 0.52
SFSWAP-204ENST00000535399 LSM3P62310 102 aaKnown RBP18.33■□□□□ 0.52
SFSWAP-204ENST00000535399 TPTE2P1Q5T6R2 138 aa18.33■□□□□ 0.52
SFSWAP-204ENST00000535399 PRR18Q8N4B5 295 aa18.33■□□□□ 0.52
SFSWAP-204ENST00000535399 CREB3L1Q96BA8 519 aa18.33■□□□□ 0.52
SFSWAP-204ENST00000535399 FUNDC2Q9BWH2 189 aa18.33■□□□□ 0.52
SFSWAP-204ENST00000535399 MRPS26Q9BYN8 205 aaKnown RBP18.33■□□□□ 0.52
SFSWAP-204ENST00000535399 RAB9BQ9NP90 201 aa18.33■□□□□ 0.52
SFSWAP-204ENST00000535399 KCNIP1Q9NZI2 227 aa18.33■□□□□ 0.52
SFSWAP-204ENST00000535399 KCNK7Q9Y2U2 307 aa18.33■□□□□ 0.52
SFSWAP-204ENST00000535399 IGHV3-43A0A0B4J1X8 118 aa18.32■□□□□ 0.52
SFSWAP-204ENST00000535399 CRYBA1P05813 215 aa18.32■□□□□ 0.52
SFSWAP-204ENST00000535399 IGHV3-43DP0DP04 118 aa18.32■□□□□ 0.52
SFSWAP-204ENST00000535399 RAB13P51153 203 aa18.32■□□□□ 0.52
SFSWAP-204ENST00000535399 DYNLT3P51808 116 aa18.32■□□□□ 0.52
SFSWAP-204ENST00000535399 RELBQ01201 579 aa18.32■□□□□ 0.52
SFSWAP-204ENST00000535399 HMGN3Q15651 99 aa18.32■□□□□ 0.52
SFSWAP-204ENST00000535399 LY6EQ16553 131 aa18.32■□□□□ 0.52
SFSWAP-204ENST00000535399 TMEM30BQ3MIR4 351 aa18.32■□□□□ 0.52
SFSWAP-204ENST00000535399 OLFML2AQ68BL7 652 aa18.32■□□□□ 0.52
SFSWAP-204ENST00000535399 OR10R2Q8NGX6 335 aa18.32■□□□□ 0.52
SFSWAP-204ENST00000535399 RAB3CQ96E17 227 aa18.32■□□□□ 0.52
SFSWAP-204ENST00000535399 RIMS4Q9H426 269 aaPredicted RBP18.32■□□□□ 0.52
SFSWAP-204ENST00000535399 CHMP1AQ9HD42 196 aaPredicted RBP18.32■□□□□ 0.52
SFSWAP-204ENST00000535399 ANK2Q01484 3957 aa18.32■□□□□ 0.52
SFSWAP-204ENST00000535399 AWAT1Q58HT5 328 aa18.31■□□□□ 0.52
SFSWAP-204ENST00000535399 C8orf31Q8N9H6 132 aa18.31■□□□□ 0.52
SFSWAP-204ENST00000535399 LGALS14Q8TCE9 139 aa18.31■□□□□ 0.52
SFSWAP-204ENST00000535399 ABCB10Q9NRK6 738 aa18.31■□□□□ 0.52
SFSWAP-204ENST00000535399 AMMECR1Q9Y4X0 333 aaPredicted RBP18.31■□□□□ 0.52
SFSWAP-204ENST00000535399 A0A1W2PPE3 182 aa18.3■□□□□ 0.52
SFSWAP-204ENST00000535399 METTL21EPA6NDL7 271 aa18.3■□□□□ 0.52
SFSWAP-204ENST00000535399 NDUFA7O95182 113 aa18.3■□□□□ 0.52
SFSWAP-204ENST00000535399 CEACAM3P40198 252 aa18.3■□□□□ 0.52
SFSWAP-204ENST00000535399 FOXL1Q12952 345 aa18.3■□□□□ 0.52
SFSWAP-204ENST00000535399 Q3ZCU0 254 aa18.3■□□□□ 0.52
SFSWAP-204ENST00000535399 IDNKQ5T6J7 187 aa18.3■□□□□ 0.52
SFSWAP-204ENST00000535399 MOB1BQ7L9L4 216 aa18.3■□□□□ 0.52
SFSWAP-204ENST00000535399 LINC00311Q8N616 119 aa18.3■□□□□ 0.52
SFSWAP-204ENST00000535399 C12orf4Q9NQ89 552 aa18.3■□□□□ 0.52
SFSWAP-204ENST00000535399 GNG12Q9UBI6 72 aa18.3■□□□□ 0.52
SFSWAP-204ENST00000535399 TCF19Q9Y242 345 aa18.3■□□□□ 0.52
SFSWAP-204ENST00000535399 A6NDX4 124 aa18.29■□□□□ 0.52
SFSWAP-204ENST00000535399 MFNGO00587 321 aa18.29■□□□□ 0.52
SFSWAP-204ENST00000535399 TFAP2AP05549 437 aa18.29■□□□□ 0.52
SFSWAP-204ENST00000535399 HIST1H1DP16402 221 aaKnown RBP18.29■□□□□ 0.52
SFSWAP-204ENST00000535399 RPS19P39019 145 aaKnown RBP18.29■□□□□ 0.52
SFSWAP-204ENST00000535399 ALDH3B2P48448 385 aa18.29■□□□□ 0.52
SFSWAP-204ENST00000535399 CCBE1Q6UXH8 406 aaPredicted RBP18.29■□□□□ 0.52
SFSWAP-204ENST00000535399 C12orf54Q6X4T0 127 aa18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms