RNA–Protein interactions for RNA: ENST00000503078.5

DDX41-202, Transcript of DEAD-box helicase 41, humanhuman

TSL 2

Gene DDX41, Length 2,375 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-202ENST00000503078 TNRC6BQ9UPQ9 1833 aaKnown RBP20.91■□□□□ 0.94
DDX41-202ENST00000503078 WDFY3Q8IZQ1 3526 aa20.91■□□□□ 0.94
DDX41-202ENST00000503078 CLDN34H7C241 214 aa20.9■□□□□ 0.94
DDX41-202ENST00000503078 CNOT4O95628 575 aaKnown RBP20.9■□□□□ 0.94
DDX41-202ENST00000503078 CYB5R3P00387 301 aaPredicted RBP20.9■□□□□ 0.94
DDX41-202ENST00000503078 HLA-HP01893 362 aa20.9■□□□□ 0.94
DDX41-202ENST00000503078 SERPINE2P07093 398 aa20.9■□□□□ 0.94
DDX41-202ENST00000503078 ZNF600Q6ZNG1 722 aa20.9■□□□□ 0.94
DDX41-202ENST00000503078 SCGB1C1Q8TD33 95 aa20.9■□□□□ 0.94
DDX41-202ENST00000503078 ABHD5Q8WTS1 349 aa20.9■□□□□ 0.94
DDX41-202ENST00000503078 GTF3AQ92664 365 aaKnown RBP20.9■□□□□ 0.94
DDX41-202ENST00000503078 FRZBQ92765 325 aa20.9■□□□□ 0.94
DDX41-202ENST00000503078 ZNF845Q96IR2 970 aaPredicted RBP20.9■□□□□ 0.94
DDX41-202ENST00000503078 ZNF665Q9H7R5 613 aa20.9■□□□□ 0.94
DDX41-202ENST00000503078 OR2W1Q9Y3N9 320 aa20.9■□□□□ 0.94
DDX41-202ENST00000503078 LRRC3CA6NJW4 275 aa20.9■□□□□ 0.94
DDX41-202ENST00000503078 TGOLN2O43493 480 aa20.9■□□□□ 0.94
DDX41-202ENST00000503078 PDZD11Q5EBL8 140 aa20.9■□□□□ 0.94
DDX41-202ENST00000503078 ZNF324BQ6AW86 544 aaPredicted RBP20.9■□□□□ 0.94
DDX41-202ENST00000503078 MRPL21Q7Z2W9 205 aaKnown RBP20.9■□□□□ 0.94
DDX41-202ENST00000503078 OR51H1Q8NH63 302 aa20.9■□□□□ 0.94
DDX41-202ENST00000503078 MBD3L1Q8WWY6 194 aa20.9■□□□□ 0.94
DDX41-202ENST00000503078 PRDM13Q9H4Q3 707 aa20.9■□□□□ 0.94
DDX41-202ENST00000503078 NOSIPQ9Y314 301 aaKnown RBP20.9■□□□□ 0.94
DDX41-202ENST00000503078 PI4KAP42356 2102 aa20.9■□□□□ 0.94
DDX41-202ENST00000503078 PTBP3O95758 552 aaKnown RBP20.89■□□□□ 0.94
DDX41-202ENST00000503078 PSG2P11465 335 aa20.89■□□□□ 0.94
DDX41-202ENST00000503078 HIST1H1BP16401 226 aaKnown RBP20.89■□□□□ 0.94
DDX41-202ENST00000503078 DEFA6Q01524 100 aa20.89■□□□□ 0.94
DDX41-202ENST00000503078 LYSMD4Q5XG99 296 aa20.89■□□□□ 0.94
DDX41-202ENST00000503078 C20orf204Q6ZNR8 217 aa20.89■□□□□ 0.94
DDX41-202ENST00000503078 CCL4P13236 92 aa20.89■□□□□ 0.93
DDX41-202ENST00000503078 FOLR3P41439 243 aa20.89■□□□□ 0.93
DDX41-202ENST00000503078 LCN15Q6UWW0 184 aa20.89■□□□□ 0.93
DDX41-202ENST00000503078 TMEM45BQ96B21 275 aa20.89■□□□□ 0.93
DDX41-202ENST00000503078 VSIRQ9H7M9 311 aa20.89■□□□□ 0.93
DDX41-202ENST00000503078 GFOD1Q9NXC2 390 aa20.89■□□□□ 0.93
DDX41-202ENST00000503078 RNF150Q9ULK6 438 aa20.89■□□□□ 0.93
DDX41-202ENST00000503078 SIT1Q9Y3P8 196 aa20.89■□□□□ 0.93
DDX41-202ENST00000503078 ZNHIT1O43257 154 aa20.88■□□□□ 0.93
DDX41-202ENST00000503078 HLA-BQ31612 363 aa20.88■□□□□ 0.93
DDX41-202ENST00000503078 OR10J5Q8NHC4 309 aa20.88■□□□□ 0.93
DDX41-202ENST00000503078 RNASE11Q8TAA1 199 aaKnown RBP20.88■□□□□ 0.93
DDX41-202ENST00000503078 PSMG3Q9BT73 122 aaPredicted RBP20.88■□□□□ 0.93
DDX41-202ENST00000503078 TRBV6-6A0A0A6YYG2 114 aa20.88■□□□□ 0.93
DDX41-202ENST00000503078 OR5H1A6NKK0 313 aa20.88■□□□□ 0.93
DDX41-202ENST00000503078 CCL2P13500 99 aa20.88■□□□□ 0.93
DDX41-202ENST00000503078 GPX4P36969 197 aaPredicted RBP20.88■□□□□ 0.93
DDX41-202ENST00000503078 ARF1P84077 181 aaKnown RBP20.88■□□□□ 0.93
DDX41-202ENST00000503078 ZNF726P1Q15940 193 aa20.88■□□□□ 0.93
DDX41-202ENST00000503078 IZUMO4Q1ZYL8 232 aa20.88■□□□□ 0.93
DDX41-202ENST00000503078 Q6ZRM9 215 aa20.88■□□□□ 0.93
DDX41-202ENST00000503078 CA5BP1Q8WTZ4 195 aa20.88■□□□□ 0.93
DDX41-202ENST00000503078 SDF2L1Q9HCN8 221 aa20.88■□□□□ 0.93
DDX41-202ENST00000503078 C5orf49A4QMS7 147 aa20.87■□□□□ 0.93
DDX41-202ENST00000503078 SYNGR1O43759 233 aa20.87■□□□□ 0.93
DDX41-202ENST00000503078 NDUFS6O75380 124 aaKnown RBP20.87■□□□□ 0.93
DDX41-202ENST00000503078 DNLZQ5SXM8 178 aa20.87■□□□□ 0.93
DDX41-202ENST00000503078 P2RX4Q99571 388 aa20.87■□□□□ 0.93
DDX41-202ENST00000503078 PLK3Q9H4B4 646 aa20.87■□□□□ 0.93
DDX41-202ENST00000503078 ERRFI1Q9UJM3 462 aaPredicted RBP20.87■□□□□ 0.93
DDX41-202ENST00000503078 MRPL33O75394 65 aaKnown RBP20.87■□□□□ 0.93
DDX41-202ENST00000503078 ZFP36L1Q07352 338 aaKnown RBP20.87■□□□□ 0.93
DDX41-202ENST00000503078 LINC00596Q86U02 117 aa20.87■□□□□ 0.93
DDX41-202ENST00000503078 PSMF1Q92530 271 aa20.87■□□□□ 0.93
DDX41-202ENST00000503078 SYNGR2O43760 224 aa20.86■□□□□ 0.93
DDX41-202ENST00000503078 ZNF525Q8N782 197 aa20.86■□□□□ 0.93
DDX41-202ENST00000503078 OR5A2Q8NGI9 324 aa20.86■□□□□ 0.93
DDX41-202ENST00000503078 RCC1LQ96I51 464 aaKnown RBP20.86■□□□□ 0.93
DDX41-202ENST00000503078 CDX2Q99626 313 aaPredicted RBP20.86■□□□□ 0.93
DDX41-202ENST00000503078 LRFN1Q9P244 771 aa20.86■□□□□ 0.93
DDX41-202ENST00000503078 CACNG5Q9UF02 275 aa20.86■□□□□ 0.93
DDX41-202ENST00000503078 A0A096LPE4 126 aa20.86■□□□□ 0.93
DDX41-202ENST00000503078 A0A1W2PPZ6 126 aa20.86■□□□□ 0.93
DDX41-202ENST00000503078 WNT2P09544 360 aa20.86■□□□□ 0.93
DDX41-202ENST00000503078 FGF8P55075 233 aaPredicted RBP20.86■□□□□ 0.93
DDX41-202ENST00000503078 ACSF3Q4G176 576 aaPredicted RBP20.86■□□□□ 0.93
DDX41-202ENST00000503078 LSM10Q969L4 123 aaKnown RBP20.86■□□□□ 0.93
DDX41-202ENST00000503078 APOBEC3DQ96AK3 386 aaPredicted RBP20.86■□□□□ 0.93
DDX41-202ENST00000503078 PSENENQ9NZ42 101 aa20.86■□□□□ 0.93
DDX41-202ENST00000503078 OR14J1Q9UGF5 321 aa20.86■□□□□ 0.93
DDX41-202ENST00000503078 TNRC6AQ8NDV7 1962 aaKnown RBP20.85■□□□□ 0.93
DDX41-202ENST00000503078 TRBV24-1A0A075B6N3 115 aa20.85■□□□□ 0.93
DDX41-202ENST00000503078 HS3ST1O14792 307 aa20.85■□□□□ 0.93
DDX41-202ENST00000503078 METTL15P1P0C7V9 234 aa20.85■□□□□ 0.93
DDX41-202ENST00000503078 GDF1P27539 372 aa20.85■□□□□ 0.93
DDX41-202ENST00000503078 CD81P60033 236 aa20.85■□□□□ 0.93
DDX41-202ENST00000503078 ARL16Q0P5N6 197 aa20.85■□□□□ 0.93
DDX41-202ENST00000503078 C9orf135Q5VTT2 229 aa20.85■□□□□ 0.93
DDX41-202ENST00000503078 ZNF880Q6PDB4 577 aa20.85■□□□□ 0.93
DDX41-202ENST00000503078 SSX7Q7RTT5 188 aa20.85■□□□□ 0.93
DDX41-202ENST00000503078 HIST1H2AAQ96QV6 131 aa20.85■□□□□ 0.93
DDX41-202ENST00000503078 PRDM6Q9NQX0 595 aa20.85■□□□□ 0.93
DDX41-202ENST00000503078 PHOX2AO14813 284 aa20.85■□□□□ 0.93
DDX41-202ENST00000503078 JMJD7P0C870 316 aa20.85■□□□□ 0.93
DDX41-202ENST00000503078 IAPPP10997 89 aa20.85■□□□□ 0.93
DDX41-202ENST00000503078 FABP4P15090 132 aa20.85■□□□□ 0.93
DDX41-202ENST00000503078 RDH5Q92781 318 aa20.85■□□□□ 0.93
DDX41-202ENST00000503078 CABLES2Q9BTV7 478 aa20.85■□□□□ 0.93
DDX41-202ENST00000503078 ZNF552Q9H707 407 aaPredicted RBP20.85■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms