RNA–Protein interactions for RNA: ENST00000389980.7

SPTBN1-203, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best)

Gene SPTBN1, Length 2,164 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-203ENST00000389980 EFNB3Q15768 340 aa10.21□□□□□ -0.78
SPTBN1-203ENST00000389980 ZNF880Q6PDB4 577 aa10.21□□□□□ -0.78
SPTBN1-203ENST00000389980 DUX4L9Q6RFH8 374 aaPredicted RBP10.21□□□□□ -0.78
SPTBN1-203ENST00000389980 DHRS11Q6UWP2 260 aa10.21□□□□□ -0.78
SPTBN1-203ENST00000389980 HSD17B13Q7Z5P4 300 aaPredicted RBP10.21□□□□□ -0.78
SPTBN1-203ENST00000389980 SLC25A42Q86VD7 318 aa10.21□□□□□ -0.78
SPTBN1-203ENST00000389980 ZNRF1Q8ND25 227 aa10.21□□□□□ -0.78
SPTBN1-203ENST00000389980 OR2AK2Q8NG84 335 aa10.21□□□□□ -0.78
SPTBN1-203ENST00000389980 TOMM40LQ969M1 308 aa10.21□□□□□ -0.78
SPTBN1-203ENST00000389980 MARC2Q969Z3 335 aa10.21□□□□□ -0.78
SPTBN1-203ENST00000389980 COQ2Q96H96 371 aa10.21□□□□□ -0.78
SPTBN1-203ENST00000389980 DIRC2Q96SL1 478 aa10.21□□□□□ -0.78
SPTBN1-203ENST00000389980 RTBDNQ9BSG5 229 aaPredicted RBP10.21□□□□□ -0.78
SPTBN1-203ENST00000389980 ALX4Q9H161 411 aaPredicted RBP10.21□□□□□ -0.78
SPTBN1-203ENST00000389980 RIMS4Q9H426 269 aaPredicted RBP10.21□□□□□ -0.78
SPTBN1-203ENST00000389980 DUX4Q9UBX2 424 aa10.21□□□□□ -0.78
SPTBN1-203ENST00000389980 PFDN2Q9UHV9 154 aa10.21□□□□□ -0.78
SPTBN1-203ENST00000389980 USF3Q68DE3 2245 aa10.2□□□□□ -0.78
SPTBN1-203ENST00000389980 TRBV6-6A0A0A6YYG2 114 aa10.2□□□□□ -0.78
SPTBN1-203ENST00000389980 A0A1W2PPR1 153 aa10.2□□□□□ -0.78
SPTBN1-203ENST00000389980 IFNL4K9M1U5 179 aa10.2□□□□□ -0.78
SPTBN1-203ENST00000389980 MPC2O95563 127 aa10.2□□□□□ -0.78
SPTBN1-203ENST00000389980 HLA-AP01891 365 aaKnown RBP10.2□□□□□ -0.78
SPTBN1-203ENST00000389980 RNF224P0DH78 156 aa10.2□□□□□ -0.78
SPTBN1-203ENST00000389980 FPR2P25090 351 aa10.2□□□□□ -0.78
SPTBN1-203ENST00000389980 DHRS2Q13268 280 aa10.2□□□□□ -0.78
SPTBN1-203ENST00000389980 SWI5Q1ZZU3 235 aa10.2□□□□□ -0.78
SPTBN1-203ENST00000389980 C11orf88Q6PI97 169 aa10.2□□□□□ -0.78
SPTBN1-203ENST00000389980 Q6ZS49 121 aa10.2□□□□□ -0.78
SPTBN1-203ENST00000389980 FAM90A1Q86YD7 464 aa10.2□□□□□ -0.78
SPTBN1-203ENST00000389980 LINC00469Q8N7U9 141 aa10.2□□□□□ -0.78
SPTBN1-203ENST00000389980 OR11L1Q8NGX0 322 aa10.2□□□□□ -0.78
SPTBN1-203ENST00000389980 Q8TCH9 128 aa10.2□□□□□ -0.78
SPTBN1-203ENST00000389980 CCL17Q92583 94 aa10.2□□□□□ -0.78
SPTBN1-203ENST00000389980 TMEM230Q96A57 120 aa10.2□□□□□ -0.78
SPTBN1-203ENST00000389980 KIRREL1Q96J84 757 aa10.2□□□□□ -0.78
SPTBN1-203ENST00000389980 VRK1Q99986 396 aaPredicted RBP10.2□□□□□ -0.78
SPTBN1-203ENST00000389980 CEACAM18A8MTB9 384 aa10.19□□□□□ -0.78
SPTBN1-203ENST00000389980 MPTX1A8MV57 137 aa10.19□□□□□ -0.78
SPTBN1-203ENST00000389980 ZNF737O75373 536 aa10.19□□□□□ -0.78
SPTBN1-203ENST00000389980 IRF2P14316 349 aa10.19□□□□□ -0.78
SPTBN1-203ENST00000389980 AADACP22760 399 aa10.19□□□□□ -0.78
SPTBN1-203ENST00000389980 GLIPR1P48060 266 aa10.19□□□□□ -0.78
SPTBN1-203ENST00000389980 EDDM3AQ14507 147 aa10.19□□□□□ -0.78
SPTBN1-203ENST00000389980 TESK1Q15569 626 aa10.19□□□□□ -0.78
SPTBN1-203ENST00000389980 SRSF7Q16629 238 aaKnown RBP eCLIP10.19□□□□□ -0.78
SPTBN1-203ENST00000389980 TUSC1Q2TAM9 212 aa10.19□□□□□ -0.78
SPTBN1-203ENST00000389980 LIN54Q6MZP7 749 aa10.19□□□□□ -0.78
SPTBN1-203ENST00000389980 PEG10Q86TG7 708 aaKnown RBP10.19□□□□□ -0.78
SPTBN1-203ENST00000389980 IL1F10Q8WWZ1 152 aa10.19□□□□□ -0.78
SPTBN1-203ENST00000389980 EGLN1Q9GZT9 426 aa10.19□□□□□ -0.78
SPTBN1-203ENST00000389980 FXYD6Q9H0Q3 95 aa10.19□□□□□ -0.78
SPTBN1-203ENST00000389980 MS4A5Q9H3V2 200 aa10.19□□□□□ -0.78
SPTBN1-203ENST00000389980 UBR5O95071 2799 aaPredicted RBP10.19□□□□□ -0.78
SPTBN1-203ENST00000389980 LRRK2Q5S007 2527 aa10.19□□□□□ -0.78
SPTBN1-203ENST00000389980 KIR2DS1A0A191URI9 304 aa10.19□□□□□ -0.78
SPTBN1-203ENST00000389980 ZNF98A6NK75 572 aa10.19□□□□□ -0.78
SPTBN1-203ENST00000389980 GYPAP02724 150 aa10.19□□□□□ -0.78
SPTBN1-203ENST00000389980 GIPP09681 153 aaPredicted RBP10.19□□□□□ -0.78
SPTBN1-203ENST00000389980 VAMP1P23763 118 aa10.19□□□□□ -0.78
SPTBN1-203ENST00000389980 ZBTB25P24278 435 aa10.19□□□□□ -0.78
SPTBN1-203ENST00000389980 GLP1RP43220 463 aa10.19□□□□□ -0.78
SPTBN1-203ENST00000389980 KIR2DS4P43632 304 aa10.19□□□□□ -0.78
SPTBN1-203ENST00000389980 HLA-DRB3P79483 266 aa10.19□□□□□ -0.78
SPTBN1-203ENST00000389980 KIR2DS1Q14954 304 aa10.19□□□□□ -0.78
SPTBN1-203ENST00000389980 KRBOX4Q5JUW0 171 aa10.19□□□□□ -0.78
SPTBN1-203ENST00000389980 GAPTQ8N292 157 aa10.19□□□□□ -0.78
SPTBN1-203ENST00000389980 CLRN3Q8NCR9 226 aa10.19□□□□□ -0.78
SPTBN1-203ENST00000389980 CASTOR1Q8WTX7 329 aa10.19□□□□□ -0.78
SPTBN1-203ENST00000389980 ERGIC1Q969X5 290 aa10.19□□□□□ -0.78
SPTBN1-203ENST00000389980 DCTN5Q9BTE1 182 aa10.19□□□□□ -0.78
SPTBN1-203ENST00000389980 PRR13Q9NZ81 148 aa10.19□□□□□ -0.78
SPTBN1-203ENST00000389980 ARID1AO14497 2285 aa10.18□□□□□ -0.78
SPTBN1-203ENST00000389980 TANC2Q9HCD6 1990 aa10.18□□□□□ -0.78
SPTBN1-203ENST00000389980 DSCAML1Q8TD84 2053 aa10.18□□□□□ -0.78
SPTBN1-203ENST00000389980 TMEM30CPA0ZSE6 113 aa10.18□□□□□ -0.78
SPTBN1-203ENST00000389980 C9orf170A2RU37 121 aa10.18□□□□□ -0.78
SPTBN1-203ENST00000389980 B3GALNT1O75752 331 aa10.18□□□□□ -0.78
SPTBN1-203ENST00000389980 FGF2P09038 288 aa10.18□□□□□ -0.78
SPTBN1-203ENST00000389980 FAM222BQ8WU58 562 aa10.18□□□□□ -0.78
SPTBN1-203ENST00000389980 CCL13Q99616 98 aa10.18□□□□□ -0.78
SPTBN1-203ENST00000389980 TAF9BQ9HBM6 251 aa10.18□□□□□ -0.78
SPTBN1-203ENST00000389980 MYOZ1Q9NP98 299 aaPredicted RBP10.18□□□□□ -0.78
SPTBN1-203ENST00000389980 OR1A1Q9P1Q5 309 aa10.18□□□□□ -0.78
SPTBN1-203ENST00000389980 FAM208BQ5VWN6 2430 aa10.18□□□□□ -0.78
SPTBN1-203ENST00000389980 LYNX1G3V0Z9 82 aa10.18□□□□□ -0.78
SPTBN1-203ENST00000389980 CCSO14618 274 aa10.18□□□□□ -0.78
SPTBN1-203ENST00000389980 OR2A4O95047 310 aa10.18□□□□□ -0.78
SPTBN1-203ENST00000389980 PPYP01298 95 aa10.18□□□□□ -0.78
SPTBN1-203ENST00000389980 TK1P04183 234 aa10.18□□□□□ -0.78
SPTBN1-203ENST00000389980 ZNF728P0DKX0 622 aa10.18□□□□□ -0.78
SPTBN1-203ENST00000389980 LYNX1P0DP58 116 aa10.18□□□□□ -0.78
SPTBN1-203ENST00000389980 FOSL1P15407 271 aa10.18□□□□□ -0.78
SPTBN1-203ENST00000389980 CXCL2P19875 107 aa10.18□□□□□ -0.78
SPTBN1-203ENST00000389980 RAP2BP61225 183 aa10.18□□□□□ -0.78
SPTBN1-203ENST00000389980 IL13RA1P78552 427 aa10.18□□□□□ -0.78
SPTBN1-203ENST00000389980 OPCMLQ14982 345 aa10.18□□□□□ -0.78
SPTBN1-203ENST00000389980 STUMQ69YW2 141 aa10.18□□□□□ -0.78
SPTBN1-203ENST00000389980 SLC35E4Q6ICL7 350 aa10.18□□□□□ -0.78
SPTBN1-203ENST00000389980 FAM53AQ6NSI3 398 aaPredicted RBP10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms